MGE detailed information
MGE type: Genomic_island MGE length: 25763 bp
Accession: NZ_CP098195 Location: 4004978..4030740 Organism: Escherichia coli strain Z0117EC0098 Replicon: chromosome
Accession: NZ_CP098195 Location: 4004978..4030740 Organism: Escherichia coli strain Z0117EC0098 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY23_RS19700 (4000558) | 4000558..4001010 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| NBY23_RS19705 (4001007) | 4001007..4002062 | - | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| NBY23_RS19710 (4002133) | 4002133..4002918 | - | 786 | WP_000207575.1 | putative lateral flagellar export/assembly protein LafU | - |
| NBY23_RS19715 (4002890) | 4002890..4004602 | + | 1713 | Protein_3873 | flagellar biosynthesis protein FlhA | - |
| NBY23_RS19720 (4004707) | 4004707..4004985 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| NBY23_RS19725 (4004978) | 4004978..4005334 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NBY23_RS19730 (4005391) | 4005391..4006164 | - | 774 | WP_000543895.1 | hypothetical protein | VF |
| NBY23_RS19735 (4006350) | 4006350..4006610 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| NBY23_RS19740 (4006613) | 4006613..4006891 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| NBY23_RS19745 (4007047) | 4007047..4007787 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| NBY23_RS19750 (4007758) | 4007758..4008525 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| NBY23_RS19755 (4008731) | 4008731..4009309 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| NBY23_RS19760 (4009549) | 4009549..4011993 | + | 2445 | WP_000973081.1 | Acyl-coenzyme A dehydrogenase | VF |
| NBY23_RS19765 (4012036) | 4012036..4012482 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| NBY23_RS19770 (4012663) | 4012663..4013433 | + | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| NBY23_RS19775 (4013475) | 4013475..4014611 | - | 1137 | Protein_3885 | ISAs1 family transposase ISEc1 | Transposase |
| NBY23_RS19780 (4014714) | 4014714..4015840 | - | 1127 | Protein_3886 | ISAs1 family transposase ISEc26 | Transposase |
| NBY23_RS19785 (4015921) | 4015921..4016106 | + | 186 | WP_122985282.1 | hypothetical protein | - |
| NBY23_RS25190 (4016021) | 4016021..4016503 | - | 483 | WP_000939262.1 | protein YdcD | - |
| NBY23_RS19795 (4016487) | 4016487..4017548 | - | 1062 | Protein_3889 | hypothetical protein | VF |
| NBY23_RS19800 (4017502) | 4017502..4018230 | + | 729 | WP_192851093.1 | hypothetical protein | VF |
| NBY23_RS19805 (4018235) | 4018235..4019647 | + | 1413 | WP_001240532.1 | hypothetical protein | VF |
| NBY23_RS19810 (4019756) | 4019756..4023191 | + | 3436 | Protein_3892 | hypothetical protein | VF |
| NBY23_RS19815 (4023202) | 4023202..4024651 | + | 1450 | Protein_3893 | VasL domain-containing protein | - |
| NBY23_RS19820 (4024578) | 4024578..4025060 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| NBY23_RS19825 (4025104) | 4025104..4026018 | + | 915 | WP_000908058.1 | hypothetical protein | - |
| NBY23_RS19830 (4026028) | 4026028..4026507 | + | 480 | WP_001236649.1 | protein YkfM | - |
| NBY23_RS19835 (4026644) | 4026644..4027429 | - | 786 | WP_001086142.1 | aminopeptidase | - |
| NBY23_RS19845 (4027969) | 4027969..4028700 | - | 732 | WP_001297205.1 | DNA polymerase III subunit epsilon | - |
| NBY23_RS19850 (4028765) | 4028765..4029232 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| NBY23_RS19855 (4029229) | 4029229..4029951 | - | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| NBY23_RS19860 (4029985) | 4029985..4030740 | + | 756 | WP_001052720.1 | hydroxyacylglutathione hydrolase | - |
| NBY23_RS19865 (4030812) | 4030812..4032170 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| NBY23_RS19870 (4032218) | 4032218..4032988 | - | 771 | WP_000211690.1 | class I SAM-dependent methyltransferase | - |
| NBY23_RS19875 (4033066) | 4033066..4033866 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| NBY23_RS19880 (4034107) | 4034107..4035021 | + | 915 | WP_000648606.1 | DNA-binding transcriptional regulator YafC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|