MGE detailed information
MGE type: Genomic_island MGE length: 15112 bp
Accession: NZ_CP098183 Location: 4399388..4414499 Organism: Escherichia coli strain Z0117EC0133 Replicon: chromosome
Accession: NZ_CP098183 Location: 4399388..4414499 Organism: Escherichia coli strain Z0117EC0133 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY27_RS21480 (4395441) | 4395441..4396385 | + | 945 | WP_000947068.1 | nickel ABC transporter permease subunit NikB | - |
| NBY27_RS21485 (4396382) | 4396382..4397215 | + | 834 | WP_001008963.1 | nickel ABC transporter permease subunit NikC | - |
| NBY27_RS21490 (4397215) | 4397215..4397979 | + | 765 | WP_001136236.1 | nickel import ATP-binding protein NikD | - |
| NBY27_RS21495 (4397976) | 4397976..4398782 | + | 807 | WP_021565456.1 | nickel import ATP-binding protein NikE | - |
| NBY27_RS21500 (4398788) | 4398788..4399189 | + | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| NBY27_RS21505 (4399388) | 4399388..4400134 | + | 747 | WP_001308115.1 | GntR family transcriptional regulator | - |
| NBY27_RS21510 (4400159) | 4400159..4400632 | + | 474 | WP_001161650.1 | PTS sugar transporter subunit IIA | - |
| NBY27_RS21515 (4400629) | 4400629..4400910 | + | 282 | WP_000084025.1 | PTS sugar transporter subunit IIB | - |
| NBY27_RS21520 (4400987) | 4400987..4402345 | + | 1359 | WP_021565455.1 | PTS galactitol transporter subunit IIC | - |
| NBY27_RS21525 (4402338) | 4402338..4403846 | + | 1509 | WP_021565454.1 | FGGY-family carbohydrate kinase | - |
| NBY27_RS21530 (4403836) | 4403836..4404105 | + | 270 | WP_000933061.1 | HPr family phosphocarrier protein | - |
| NBY27_RS21535 (4404137) | 4404137..4404997 | + | 861 | WP_001131788.1 | class II aldolase | - |
| NBY27_RS21540 (4405047) | 4405047..4405406 | - | 360 | WP_000593555.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| NBY27_RS21545 (4405403) | 4405403..4405678 | - | 276 | WP_001259385.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| NBY27_RS21550 (4405737) | 4405737..4406861 | - | 1125 | WP_021565453.1 | ABC transporter permease | - |
| NBY27_RS21555 (4406861) | 4406861..4409596 | - | 2736 | WP_064484666.1 | Ribosome-associated ATPase | VF |
| NBY27_RS21560 (4409593) | 4409593..4410660 | - | 1068 | WP_021565451.1 | HlyD family secretion protein | - |
| NBY27_RS21565 (4410723) | 4410723..4410836 | - | 114 | WP_213054563.1 | hypothetical protein | - |
| NBY27_RS21570 (4411026) | 4411026..4412648 | - | 1623 | WP_021565450.1 | DUF4049 domain-containing protein | - |
| NBY27_RS21575 (4412910) | 4412910..4414499 | - | 1590 | WP_021565449.1 | DUF4049 domain-containing protein | - |
| NBY27_RS21580 (4414882) | 4414882..4415934 | + | 1053 | WP_001461685.1 | DUF2776 domain-containing protein | - |
| NBY27_RS21585 (4416251) | 4416251..4417453 | - | 1203 | WP_000439188.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| NBY27_RS21590 (4417685) | 4417685..4419184 | + | 1500 | WP_000902780.1 | inorganic phosphate transporter PitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|