MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60138 bp
Accession: NZ_CP098181 Location: 1..60138 Organism: Escherichia coli strain Z0117EC0148 Replicon: plasmid pZ0117EC0148-3
Accession: NZ_CP098181 Location: 1..60138 Organism: Escherichia coli strain Z0117EC0148 Replicon: plasmid pZ0117EC0148-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY28_RS24735 (NBY28_24740) | 3174..3614 | - | 441 | WP_000666090.1 | hypothetical protein | - |
| NBY28_RS24740 (NBY28_24745) | 3859..4251 | - | 393 | WP_231549961.1 | hypothetical protein | - |
| NBY28_RS24745 (NBY28_24750) | 4352..4558 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| NBY28_RS24750 (NBY28_24755) | 4677..4997 | - | 321 | WP_000668719.1 | hypothetical protein | - |
| NBY28_RS24755 (NBY28_24760) | 5472..7628 | - | 2157 | WP_044317211.1 | type IA DNA topoisomerase | - |
| NBY28_RS24760 (NBY28_24765) | 7640..8227 | - | 588 | WP_021563362.1 | DUF6012 family protein | - |
| NBY28_RS24765 (NBY28_24770) | 8591..8995 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| NBY28_RS24770 (NBY28_24775) | 9011..9546 | - | 536 | Protein_8 | thermonuclease family protein | - |
| NBY28_RS24775 (NBY28_24780) | 9576..10229 | - | 654 | WP_021563364.1 | hypothetical protein | - |
| NBY28_RS24780 (NBY28_24785) | 10241..11365 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| NBY28_RS24785 | 11414..11722 | + | 309 | WP_001199277.1 | hypothetical protein | - |
| NBY28_RS24790 (NBY28_24790) | 12223..13599 | - | 1377 | WP_000750519.1 | hypothetical protein | VF |
| NBY28_RS24795 (NBY28_24795) | 13612..14247 | - | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| NBY28_RS24800 (NBY28_24800) | 14251..14733 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| NBY28_RS24805 (NBY28_24805) | 14800..15357 | - | 558 | WP_137509278.1 | type 4 pilus major pilin | - |
| NBY28_RS24810 (NBY28_24810) | 15402..16511 | - | 1110 | WP_000974900.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| NBY28_RS24815 (NBY28_24815) | 16502..18040 | - | 1539 | WP_000466222.1 | Type II secretion system protein E | VF |
| NBY28_RS24820 (NBY28_24820) | 18065..18559 | - | 495 | WP_020245536.1 | hypothetical protein | VF |
| NBY28_RS24825 (NBY28_24825) | 18543..19853 | - | 1311 | WP_021563352.1 | type 4b pilus protein PilO2 | - |
| NBY28_RS24830 (NBY28_24830) | 19904..21547 | - | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| NBY28_RS24835 (NBY28_24835) | 21540..22070 | - | 531 | WP_020246093.1 | sigma 54-interacting transcriptional regulator | - |
| NBY28_RS24840 (NBY28_24840) | 22117..24075 | - | 1959 | WP_020245780.1 | type IV secretory system conjugative DNA transfer family protein | - |
| NBY28_RS24845 (NBY28_24845) | 24091..25146 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| NBY28_RS24850 (NBY28_24850) | 25165..26304 | - | 1140 | WP_000790641.1 | Type IV secretion system protein virB10 | VF |
| NBY28_RS24855 (NBY28_24855) | 26294..27064 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| NBY28_RS24860 (NBY28_24860) | 27061..27795 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| NBY28_RS24865 (NBY28_24865) | 27958..30315 | - | 2358 | WP_015387356.1 | VirB4 family type IV secretion system protein | - |
| NBY28_RS24870 (NBY28_24870) | 30321..30641 | - | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| NBY28_RS24875 (NBY28_24875) | 30712..31002 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| NBY28_RS24880 (NBY28_24880) | 31002..31586 | - | 585 | WP_001401693.1 | Type IV secretion system protein virB1 | VF |
| NBY28_RS24885 (NBY28_24885) | 31607..32005 | - | 399 | WP_001708012.1 | hypothetical protein | - |
| NBY28_RS24890 (NBY28_24890) | 32124..32561 | - | 438 | WP_020245538.1 | type IV pilus biogenesis protein PilM | - |
| NBY28_RS24895 (NBY28_24895) | 32567..33802 | - | 1236 | WP_020245539.1 | hypothetical protein | VF |
| NBY28_RS24900 (NBY28_24900) | 33805..34092 | - | 288 | WP_001326593.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NBY28_RS24905 (NBY28_24905) | 34264..34899 | - | 636 | WP_020246148.1 | hypothetical protein | - |
| NBY28_RS24910 (NBY28_24910) | 34947..35756 | + | 810 | WP_231549963.1 | DUF5710 domain-containing protein | - |
| NBY28_RS24915 (NBY28_24915) | 35979..36203 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| NBY28_RS24920 (NBY28_24920) | 36212..36856 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| NBY28_RS24925 (NBY28_24925) | 36862..37857 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| NBY28_RS24930 (NBY28_24930) | 37861..38118 | - | 258 | WP_000739143.1 | hypothetical protein | - |
| NBY28_RS24935 (NBY28_24935) | 38115..38417 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| NBY28_RS24940 (NBY28_24940) | 38433..38684 | - | 252 | WP_015387362.1 | hypothetical protein | - |
| NBY28_RS24945 (NBY28_24945) | 38832..39494 | - | 663 | WP_001243162.1 | hypothetical protein | - |
| NBY28_RS24950 (NBY28_24950) | 39505..39675 | - | 171 | WP_000550721.1 | hypothetical protein | - |
| NBY28_RS24955 (NBY28_24955) | 39679..40122 | - | 444 | WP_000964840.1 | NfeD family protein | - |
| NBY28_RS24960 (NBY28_24960) | 40502..41455 | - | 954 | WP_072105959.1 | SPFH domain-containing protein | - |
| NBY28_RS24965 (NBY28_24965) | 41501..41695 | - | 195 | WP_021563354.1 | DUF1187 family protein | - |
| NBY28_RS24970 (NBY28_24970) | 41688..42140 | - | 453 | WP_231549962.1 | CaiF/GrlA family transcriptional regulator | - |
| NBY28_RS24975 (NBY28_24975) | 43272..44300 | + | 1029 | WP_001175209.1 | plasmid replication initiator RepA | - |
| NBY28_RS24980 (NBY28_24980) | 45650..45802 | + | 153 | Protein_50 | DUF5431 family protein | - |
| NBY28_RS24985 (NBY28_24985) | 45747..45869 | + | 123 | WP_223202818.1 | Hok/Gef family protein | - |
| NBY28_RS24990 (NBY28_24990) | 46019..46615 | + | 597 | WP_000125164.1 | ProQ/FINO family protein | - |
| NBY28_RS24995 (NBY28_24995) | 46633..46917 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| NBY28_RS25000 (NBY28_25000) | 46991..47656 | - | 666 | WP_000532149.1 | division plane positioning ATPase MipZ | - |
| NBY28_RS25005 (NBY28_25005) | 48243..48572 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| NBY28_RS25010 (NBY28_25010) | 48976..49491 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| NBY28_RS25015 (NBY28_25015) | 49595..50137 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| NBY28_RS25020 (NBY28_25020) | 50134..50388 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| NBY28_RS25025 (NBY28_25025) | 50385..50627 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| NBY28_RS25030 (NBY28_25030) | 51198..51479 | + | 282 | WP_021563355.1 | hypothetical protein | - |
| NBY28_RS25035 (NBY28_25035) | 51531..51905 | + | 375 | WP_021563356.1 | hypothetical protein | - |
| NBY28_RS25040 (NBY28_25040) | 51920..52213 | + | 294 | WP_001401669.1 | hypothetical protein | - |
| NBY28_RS25045 (NBY28_25045) | 52623..53066 | - | 444 | WP_000192626.1 | hypothetical protein | - |
| NBY28_RS25050 (NBY28_25050) | 53363..53545 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| NBY28_RS25055 (NBY28_25055) | 53570..54007 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NBY28_RS25060 (NBY28_25060) | 54138..54458 | - | 321 | WP_001310435.1 | hypothetical protein | - |
| NBY28_RS25065 (NBY28_25065) | 54792..54970 | - | 179 | Protein_67 | hypothetical protein | - |
| NBY28_RS25070 (NBY28_25070) | 55007..55270 | - | 264 | WP_000224227.1 | hypothetical protein | - |
| NBY28_RS25075 (NBY28_25075) | 55596..55712 | - | 117 | Protein_69 | hypothetical protein | - |
| NBY28_RS25080 (NBY28_25080) | 55716..56003 | - | 288 | WP_000212745.1 | hypothetical protein | - |
| NBY28_RS25085 (NBY28_25085) | 56005..56457 | - | 453 | WP_021563357.1 | hypothetical protein | - |
| NBY28_RS25090 (NBY28_25090) | 56477..57184 | - | 708 | WP_000108796.1 | hypothetical protein | - |
| NBY28_RS25095 (NBY28_25095) | 57186..57938 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| NBY28_RS25100 (NBY28_25100) | 57956..58357 | - | 402 | WP_000717860.1 | hypothetical protein | - |
| NBY28_RS25105 (NBY28_25105) | 58726..59067 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|