MGE detailed information
MGE type: Prophage MGE length: 20616 bp
Accession: NZ_CP098178 Location: 2265185..2285800 Organism: Escherichia coli strain Z0117EC0148 Replicon: chromosome
Accession: NZ_CP098178 Location: 2265185..2285800 Organism: Escherichia coli strain Z0117EC0148 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY28_RS11125 (2261174) | 2261174..2261221 | + | 48 | WP_211180494.1 | protein YnaN | - |
| NBY28_RS11130 (2261235) | 2261235..2262218 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| NBY28_RS25525 (2262493) | 2262493..2262666 | + | 174 | WP_001296046.1 | protein YnaL | - |
| NBY28_RS11135 (2262696) | 2262696..2264069 | + | 1374 | WP_000123739.1 | ATP-dependent RNA helicase DbpA | - |
| NBY28_RS11140 (2264198) | 2264198..2265133 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| NBY28_RS11145 (2265185) | 2265185..2266420 | - | 1236 | WP_000040858.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NBY28_RS11150 (2266422) | 2266422..2266637 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2266741) | 2266741..2266919 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2266741) | 2266741..2266919 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2266741) | 2266741..2266919 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2266741) | 2266741..2266919 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| NBY28_RS11155 (2266716) | 2266716..2266925 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| NBY28_RS11160 (2266918) | 2266918..2267112 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| NBY28_RS11165 (2267169) | 2267169..2267978 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| NBY28_RS11170 (2267971) | 2267971..2268768 | - | 798 | Protein_2172 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| NBY28_RS11180 (2270217) | 2270217..2270555 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| NBY28_RS11185 (2271369) | 2271369..2271968 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| NBY28_RS11190 (2271968) | 2271968..2272258 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| NBY28_RS11195 (2272255) | 2272255..2272797 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| NBY28_RS11200 (2274010) | 2274010..2274270 | + | 261 | Protein_2178 | cell envelope integrity protein TolA | - |
| NBY28_RS11205 (2274442) | 2274442..2274816 | + | 375 | WP_001348108.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| NBY28_RS11210 (2275068) | 2275068..2275283 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| NBY28_RS11215 (2275283) | 2275283..2275780 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| NBY28_RS11220 (2275997) | 2275997..2276182 | + | 186 | WP_001228691.1 | prophage lysis lipoprotein RzoD | - |
| NBY28_RS11225 (2276379) | 2276379..2277836 | + | 1458 | WP_024235095.1 | Trk system potassium transporter TrkG | - |
| NBY28_RS11230 (2277974) | 2277974..2278231 | + | 258 | Protein_2184 | ParB/Srx family N-terminal domain-containing protein | - |
| NBY28_RS11235 (2278533) | 2278533..2279710 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| NBY28_RS11240 (2279718) | 2279718..2280410 | + | 693 | Protein_2186 | phage tail protein | - |
| NBY28_RS11245 (2280478) | 2280478..2281077 | + | 600 | WP_063112646.1 | Outer membrane protein X | VF |
| NBY28_RS11250 (2281142) | 2281142..2284537 | + | 3396 | WP_250844249.1 | prophage tail fiber N-terminal domain-containing protein | - |
| NBY28_RS11255 (2284537) | 2284537..2285112 | + | 576 | WP_063112647.1 | tail fiber assembly protein | - |
| NBY28_RS11260 (2285210) | 2285210..2285800 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NBY28_RS11265 (2286168) | 2286168..2286350 | - | 183 | WP_063112648.1 | hypothetical protein | - |
| NBY28_RS11270 (2286419) | 2286419..2286532 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| NBY28_RS11275 (2286872) | 2286872..2287045 | + | 174 | WP_001157925.1 | hypothetical protein | - |
| NBY28_RS11280 (2287310) | 2287310..2287744 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| NBY28_RS11285 (2287885) | 2287885..2289018 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|