MGE detailed information
MGE type: Genomic_island MGE length: 37972 bp
Accession: NZ_CP097983 Location: 576639..614610 Organism: Pantoea alhagi strain NX-11 Replicon: chromosome
Accession: NZ_CP097983 Location: 576639..614610 Organism: Pantoea alhagi strain NX-11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ939_RS02675 (LQ939_02675) | 572535..573479 | + | 945 | WP_250651645.1 | fimbrial protein | - |
| LQ939_RS02680 (LQ939_02680) | 573546..574055 | - | 510 | WP_250651646.1 | DUF2501 domain-containing protein | - |
| LQ939_RS19745 | 574043..574177 | + | 135 | WP_276575734.1 | hypothetical protein | - |
| LQ939_RS02690 (LQ939_02690) | 574579..575850 | + | 1272 | WP_250651647.1 | integrase arm-type DNA-binding domain-containing protein | - |
| LQ939_RS02695 (LQ939_02695) | 576080..576628 | - | 549 | WP_250651648.1 | hypothetical protein | - |
| LQ939_RS02700 (LQ939_02700) | 576639..576977 | - | 339 | WP_250651649.1 | hypothetical protein | - |
| LQ939_RS02705 (LQ939_02705) | 576977..578599 | - | 1623 | WP_250651650.1 | AAA family ATPase | - |
| LQ939_RS02710 (LQ939_02710) | 578596..579702 | - | 1107 | WP_250652655.1 | restriction endonuclease subunit S | - |
| LQ939_RS02715 (LQ939_02715) | 579711..581345 | - | 1635 | WP_250651651.1 | type I restriction-modification system subunit M | - |
| LQ939_RS02720 (LQ939_02720) | 581409..584822 | - | 3414 | WP_250651652.1 | DEAD/DEAH box helicase family protein | - |
| LQ939_RS02725 (LQ939_02725) | 584953..585528 | - | 576 | WP_086617789.1 | hypothetical protein | - |
| LQ939_RS02730 (LQ939_02730) | 585609..585815 | - | 207 | WP_155574776.1 | AlpA family phage regulatory protein | - |
| LQ939_RS02735 (LQ939_02735) | 585925..586503 | - | 579 | WP_250651653.1 | inovirus-type Gp2 protein | - |
| LQ939_RS02740 (LQ939_02740) | 586642..587846 | + | 1205 | WP_250651654.1 | IS3 family transposase ISAs17 | Transposase |
| LQ939_RS02745 (LQ939_02745) | 588462..589337 | + | 876 | WP_250651655.1 | hypothetical protein | - |
| LQ939_RS02750 (LQ939_02750) | 589434..590310 | + | 877 | Protein_538 | GTPase family protein | - |
| LQ939_RS02755 (LQ939_02755) | 590523..591224 | + | 702 | WP_250651656.1 | WYL domain-containing protein | - |
| LQ939_RS02760 (LQ939_02760) | 591230..591862 | + | 633 | WP_250651657.1 | hypothetical protein | - |
| LQ939_RS02765 (LQ939_02765) | 592031..592441 | + | 411 | WP_250652656.1 | IrmA family protein | - |
| LQ939_RS02770 (LQ939_02770) | 592561..593382 | + | 822 | WP_250651658.1 | DUF932 domain-containing protein | - |
| LQ939_RS02775 (LQ939_02775) | 593453..593926 | + | 474 | WP_171402892.1 | DNA repair protein RadC | - |
| LQ939_RS02780 (LQ939_02780) | 593971..594297 | + | 327 | WP_250651659.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LQ939_RS02785 (LQ939_02785) | 594333..594674 | + | 342 | WP_171402893.1 | TA system toxin CbtA family protein | Toxin Detail |
| LQ939_RS02790 (LQ939_02790) | 594789..595622 | + | 834 | WP_250651660.1 | DUF4942 domain-containing protein | - |
| LQ939_RS02795 (LQ939_02795) | 595699..595947 | + | 249 | WP_000535213.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LQ939_RS02800 (LQ939_02800) | 595951..596226 | + | 276 | WP_250651661.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LQ939_RS02805 (LQ939_02805) | 596342..597140 | + | 799 | Protein_549 | hypothetical protein | VF |
| LQ939_RS02810 (LQ939_02810) | 597564..598388 | + | 825 | WP_250651662.1 | hypothetical protein | - |
| LQ939_RS02815 (LQ939_02815) | 598396..598695 | + | 300 | WP_250651663.1 | contact-dependent growth inhibition system immunity protein | - |
| LQ939_RS02820 (LQ939_02820) | 598855..599292 | - | 438 | Protein_552 | IS3 family transposase IS1351 | Transposase |
| LQ939_RS02825 (LQ939_02825) | 599718..601367 | + | 1650 | WP_250651664.1 | DNA phosphorothioation-dependent restriction protein DptF | - |
| LQ939_RS02830 (LQ939_02830) | 601372..602697 | + | 1326 | WP_250651665.1 | DNA phosphorothioation-dependent restriction protein DptG | - |
| LQ939_RS02835 (LQ939_02835) | 602678..607762 | + | 5085 | WP_250651666.1 | DNA phosphorothioation-dependent restriction protein DptH | - |
| LQ939_RS02840 (LQ939_02840) | 607791..608282 | + | 492 | WP_250651667.1 | hypothetical protein | - |
| LQ939_RS02845 (LQ939_02845) | 608279..609490 | + | 1212 | WP_250651668.1 | DNA phosphorothioation-associated DGQHR protein 1 | - |
| LQ939_RS02850 (LQ939_02850) | 609549..609903 | - | 355 | Protein_558 | DNA sulfur modification protein DndE | - |
| LQ939_RS02855 (LQ939_02855) | 609903..611903 | - | 2001 | WP_250651669.1 | DNA sulfur modification protein DndD | - |
| LQ939_RS02860 (LQ939_02860) | 611893..613528 | - | 1636 | Protein_560 | DNA phosphorothioation system sulfurtransferase DndC | - |
| LQ939_RS02865 (LQ939_02865) | 613525..614610 | - | 1086 | WP_250651670.1 | DNA sulfur modification protein DndB | - |
| LQ939_RS02870 (LQ939_02870) | 614836..615388 | + | 553 | Protein_562 | YtfJ family protein | - |
| LQ939_RS02875 (LQ939_02875) | 615620..616537 | + | 918 | WP_250651671.1 | polyprenyl synthetase family protein | - |
| LQ939_RS02880 (LQ939_02880) | 616537..617565 | + | 1029 | WP_250651672.1 | type 2 isopentenyl-diphosphate Delta-isomerase | - |
| LQ939_RS02885 (LQ939_02885) | 617562..618827 | + | 1266 | WP_250651673.1 | glycosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|