MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 17166 bp
Accession: NZ_CP097896 Location: 1124675..1141840 Organism: Pectobacterium actinidiae strain GX-Pa1 Replicon: chromosome
Accession: NZ_CP097896 Location: 1124675..1141840 Organism: Pectobacterium actinidiae strain GX-Pa1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9782_RS04980 (M9782_04980) | 1123653..1124447 | + | 795 | WP_275071802.1 | thioesterase domain-containing protein | - |
| M9782_RS04985 (M9782_04985) | 1124930..1125154 | + | 225 | WP_275071803.1 | DUF1778 domain-containing protein | - |
| M9782_RS04990 (M9782_04990) | 1125271..1126395 | + | 1125 | WP_275071804.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| M9782_RS04995 (M9782_04995) | 1126648..1128537 | + | 1890 | WP_130640477.1 | N-6 DNA methylase | - |
| M9782_RS05000 (M9782_05000) | 1128524..1129489 | + | 966 | WP_275071805.1 | restriction endonuclease subunit S | - |
| M9782_RS05005 (M9782_05005) | 1129635..1130457 | - | 823 | Protein_968 | transposase | - |
| M9782_RS05010 (M9782_05010) | 1130527..1131096 | - | 570 | WP_015854719.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| M9782_RS05015 (M9782_05015) | 1131062..1131274 | - | 213 | WP_023638430.1 | hypothetical protein | - |
| M9782_RS05020 (M9782_05020) | 1131352..1133973 | + | 2622 | WP_275071806.1 | N-6 DNA methylase | - |
| M9782_RS05025 (M9782_05025) | 1134026..1135975 | + | 1950 | WP_275071807.1 | helicase-related protein | - |
| M9782_RS05030 (M9782_05030) | 1135977..1137236 | + | 1260 | WP_275071808.1 | GIY-YIG nuclease family protein | - |
| M9782_RS05035 (M9782_05035) | 1137371..1137676 | - | 306 | WP_275071809.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| M9782_RS05040 (M9782_05040) | 1137679..1137897 | - | 219 | WP_275071810.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| M9782_RS05045 (M9782_05045) | 1137956..1138699 | - | 744 | WP_275071811.1 | MobC family replication-relaxation protein | - |
| M9782_RS05050 (M9782_05050) | 1139611..1139952 | - | 342 | WP_038917757.1 | hypothetical protein | - |
| M9782_RS05055 (M9782_05055) | 1140093..1140263 | + | 171 | WP_162847981.1 | hypothetical protein | - |
| M9782_RS05060 (M9782_05060) | 1140404..1141663 | - | 1260 | WP_275071812.1 | Prophage integrase IntS ; Integrase | Integrase |
| M9782_RS05070 (M9782_05070) | 1142027..1142602 | - | 576 | WP_010301517.1 | transcriptional regulator | - |
| M9782_RS05075 (M9782_05075) | 1142836..1144566 | - | 1731 | WP_275071813.1 | protein-disulfide reductase DsbD | - |
| M9782_RS05080 (M9782_05080) | 1144542..1144874 | - | 333 | WP_275071814.1 | divalent cation tolerance protein CutA | - |
| M9782_RS05085 (M9782_05085) | 1145023..1146324 | - | 1302 | WP_275071815.1 | anaerobic C4-dicarboxylate transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|