MGE detailed information
MGE type: IScluster/Tn MGE length: 34684 bp
Accession: NZ_CP097841 Location: 340..35023 Organism: Shigella flexneri strain A Replicon: plasmid unnamed1
Accession: NZ_CP097841 Location: 340..35023 Organism: Shigella flexneri strain A Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9382_RS22785 (M9382_22790) | 340..1548 | + | 1209 | Protein_1 | IS3 family transposase | - |
| M9382_RS22790 (M9382_22795) | 1592..1804 | - | 213 | Protein_2 | DDE-type integrase/transposase/recombinase | - |
| M9382_RS22795 (M9382_22800) | 2148..2354 | + | 207 | WP_001145604.1 | hypothetical protein | - |
| M9382_RS22800 (M9382_22805) | 2552..3916 | + | 1365 | WP_000051932.1 | MFS transporter | - |
| M9382_RS22805 (M9382_22810) | 3966..4175 | + | 210 | Protein_5 | peptidoglycan-binding protein | - |
| M9382_RS22810 (M9382_22815) | 4269..4460 | - | 192 | Protein_6 | IS21 family transposase IS100 | Transposase |
| M9382_RS22815 (M9382_22820) | 4501..4998 | - | 498 | Protein_7 | IS66 family transposase ISEc47 | Transposase |
| M9382_RS22820 (M9382_22825) | 5101..6309 | - | 1209 | Protein_8 | IS3 family transposase | - |
| M9382_RS22825 (M9382_22830) | 6507..7223 | + | 717 | Protein_9 | IS21 family transposase IS100kyp | Transposase |
| M9382_RS22835 (M9382_22840) | 8787..9059 | - | 273 | WP_258249732.1 | hypothetical protein | - |
| M9382_RS22840 (M9382_22845) | 9226..9345 | - | 120 | Protein_12 | IS66 family transposase ISCro1 | Transposase |
| M9382_RS22845 (M9382_22850) | 9462..11159 | - | 1698 | WP_010921642.1 | hypothetical protein | VF |
| M9382_RS22850 (M9382_22855) | 11235..11384 | + | 150 | Protein_14 | IS1 family transposase | - |
| M9382_RS22855 (M9382_22860) | 11488..12900 | - | 1413 | WP_010921643.1 | hypothetical protein | VF |
| M9382_RS22860 (M9382_22865) | 13350..13412 | + | 63 | Protein_16 | IS66 family transposase ISCro1 | Transposase |
| M9382_RS22865 (M9382_22870) | 13433..13654 | - | 222 | Protein_17 | IS66 family transposase ISCro1 | Transposase |
| M9382_RS22870 (M9382_22875) | 13797..13990 | - | 194 | Protein_18 | HNH endonuclease signature motif containing protein | - |
| M9382_RS22875 | 14072..14203 | + | 132 | WP_000124143.1 | hypothetical protein | - |
| M9382_RS22885 (M9382_22885) | 15194..15667 | - | 474 | WP_005038443.1 | HTH-type transcriptional activator RhaR | VF |
| M9382_RS22890 (M9382_22890) | 15918..17114 | + | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| M9382_RS22895 (M9382_22895) | 17109..17533 | - | 425 | Protein_23 | hypothetical protein | - |
| M9382_RS22900 (M9382_22900) | 17761..18399 | - | 639 | WP_000502862.1 | ParB N-terminal domain-containing protein | - |
| M9382_RS22905 (M9382_22905) | 18384..18527 | - | 144 | Protein_25 | DUF3440 domain-containing protein | - |
| M9382_RS22920 (M9382_22920) | 21130..21411 | + | 282 | Protein_28 | IS4 family transposase ISSfl1 | Transposase |
| M9382_RS22925 (M9382_22925) | 21584..22069 | - | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| M9382_RS22930 (M9382_22930) | 22057..22341 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| M9382_RS22935 (M9382_22935) | 23243..23407 | + | 165 | WP_001346193.1 | hypothetical protein | - |
| M9382_RS22940 (M9382_22940) | 23661..25262 | - | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| M9382_RS22945 (M9382_22945) | 25259..25609 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| M9382_RS22950 (M9382_22950) | 25606..26280 | - | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| M9382_RS22955 (M9382_22955) | 26852..28306 | + | 1455 | WP_094169927.1 | hypothetical protein | VF |
| M9382_RS22960 (M9382_22960) | 28644..29708 | + | 1065 | Protein_36 | IS3 family transposase IS600 | Transposase |
| M9382_RS22965 (M9382_22965) | 29749..30552 | + | 804 | Protein_37 | IS3 family transposase | - |
| M9382_RS22970 (M9382_22970) | 30667..31008 | + | 342 | Protein_38 | IS21 family transposase ISEc62 | Transposase |
| M9382_RS22975 (M9382_22975) | 30991..31828 | + | 838 | Protein_39 | IS21 family transposase ISEc62 | Transposase |
| M9382_RS22980 (M9382_22980) | 31878..33074 | - | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| M9382_RS22985 (M9382_22985) | 33266..34270 | - | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| M9382_RS22990 (M9382_22990) | 34617..35433 | + | 817 | Protein_42 | IS110 family transposase | - |
| M9382_RS22995 (M9382_22995) | 35623..36402 | + | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| M9382_RS23000 (M9382_23000) | 37349..38278 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| M9382_RS23005 (M9382_23005) | 38495..38731 | - | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|