MGE detailed information
MGE type: Prophage MGE length: 42914 bp
Accession: NZ_CP097840 Location: 2720308..2763221 Organism: Shigella flexneri strain A Replicon: chromosome
Accession: NZ_CP097840 Location: 2720308..2763221 Organism: Shigella flexneri strain A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9382_RS13170 () | 2715434..2717061 | + | 1628 | Protein_2563 | toxic metabolite efflux MATE transporter YeeO | - |
| M9382_RS13180 () | 2717693..2718409 | - | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| M9382_RS13185 () | 2718752..2720206 | - | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| M9382_RS13190 () | 2720308..2720514 | - | 207 | WP_000466572.1 | hypothetical protein | - |
| M9382_RS13195 () | 2720515..2721714 | - | 1200 | Protein_2567 | IS3 family transposase IS600 | Transposase |
| M9382_RS13200 () | 2721779..2722267 | - | 489 | Protein_2568 | MFS transporter | - |
| M9382_RS13205 () | 2722341..2723509 | + | 1169 | WP_128599161.1 | IS3 family transposase ISLad1 | Transposase |
| M9382_RS13210 () | 2723616..2724878 | - | 1263 | Protein_2570 | Prophage integrase IntA ; Integrase | Integrase |
| M9382_RS13220 () | 2725216..2726013 | - | 798 | WP_024260703.1 | DgsA anti-repressor MtfA | - |
| M9382_RS13230 () | 2726224..2727264 | - | 1041 | WP_005096324.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| M9382_RS13235 () | 2727264..2727404 | - | 141 | Protein_2573 | DUF4224 domain-containing protein | - |
| M9382_RS13240 () | 2727431..2727847 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - | 2728429..2728487 | - | 59 | - | - | Antitoxin Detail |
| M9382_RS13245 () | 2728499..2728654 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| M9382_RS13250 () | 2728822..2729100 | + | 279 | WP_011069426.1 | hypothetical protein | - |
| M9382_RS13255 () | 2729102..2730160 | + | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| M9382_RS13260 () | 2730161..2730526 | + | 366 | WP_000140017.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M9382_RS13265 () | 2730523..2731211 | + | 689 | Protein_2579 | bacteriophage antitermination protein Q | - |
| M9382_RS13290 () | 2732007..2732222 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| M9382_RS13295 () | 2732321..2732995 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| M9382_RS13300 () | 2732992..2733342 | + | 351 | WP_005049241.1 | IS66 family transposase ISSfl3 | Transposase |
| M9382_RS13305 () | 2733339..2734151 | + | 813 | Protein_2583 | IS66 family transposase ISSfl3 | Transposase |
| M9382_RS13310 () | 2734305..2734628 | + | 324 | WP_000924704.1 | head-tail connector protein | - |
| M9382_RS13315 () | 2734625..2735041 | + | 417 | WP_000702444.1 | phage head closure protein | - |
| M9382_RS13320 () | 2735007..2735531 | + | 525 | WP_001076765.1 | hypothetical protein | - |
| M9382_RS13325 () | 2735528..2735752 | + | 225 | Protein_2587 | hypothetical protein | - |
| M9382_RS13330 () | 2735818..2736974 | + | 1157 | WP_094081558.1 | IS3 family transposase IS600 | Transposase |
| M9382_RS13335 () | 2736999..2737358 | + | 360 | Protein_2589 | hypothetical protein | - |
| M9382_RS13340 () | 2737368..2737529 | + | 162 | WP_000497744.1 | DUF2635 domain-containing protein | - |
| M9382_RS13345 () | 2737526..2739022 | + | 1497 | WP_000155744.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| M9382_RS13350 () | 2739022..2739378 | + | 357 | WP_001062338.1 | phage tail tube protein | - |
| M9382_RS13355 () | 2739378..2739713 | + | 336 | WP_001251340.1 | phage tail assembly protein | - |
| M9382_RS13360 () | 2739798..2741099 | + | 1302 | Protein_2594 | phage tail tape measure protein | - |
| M9382_RS13370 () | 2742361..2743014 | + | 654 | Protein_2596 | phage tail tape measure protein | - |
| M9382_RS13375 () | 2743082..2743564 | + | 483 | WP_000594909.1 | hypothetical protein | - |
| M9382_RS13385 () | 2744412..2745269 | + | 858 | Protein_2599 | IS3 family transposase IS600 | Transposase |
| M9382_RS13390 () | 2745310..2745789 | + | 480 | Protein_2600 | DUF4376 domain-containing protein | - |
| M9382_RS13395 () | 2745969..2747612 | - | 1644 | WP_011110600.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| M9382_RS13400 () | 2747928..2748596 | - | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| M9382_RS13405 () | 2748653..2748922 | + | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| M9382_RS13410 () | 2750000..2750650 | - | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| M9382_RS13415 () | 2750908..2751543 | - | 636 | WP_001240061.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| M9382_RS13420 () | 2751544..2752548 | - | 1005 | Protein_2606 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| M9382_RS13425 () | 2752657..2753070 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| M9382_RS13430 () | 2753203..2753874 | + | 672 | WP_001347103.1 | Transcriptional regulatory protein HprR | VF |
| M9382_RS13435 () | 2753874..2754821 | + | 948 | Protein_2609 | two-component system sensor histidine kinase HprS | - |
| M9382_RS13445 () | 2756158..2756337 | - | 180 | Protein_2611 | porin | - |
| M9382_RS13450 () | 2756431..2757659 | + | 1229 | WP_111778310.1 | IS3 family transposase IS2 | Transposase |
| M9382_RS13455 () | 2757668..2758432 | - | 765 | Protein_2613 | porin | - |
| M9382_RS13460 () | 2758498..2758608 | + | 111 | Protein_2614 | IS3 family transposase ISEhe3 | Transposase |
| M9382_RS13465 () | 2758677..2759845 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| M9382_RS13470 () | 2759802..2760898 | + | 1097 | WP_232046048.1 | IS3 family transposase ISEhe3 | Transposase |
| M9382_RS13475 () | 2760899..2761156 | + | 258 | WP_032155863.1 | cell division protein DrpB | - |
| M9382_RS13480 () | 2761196..2761736 | + | 541 | Protein_2618 | phosphohydrolase | - |
| M9382_RS13485 () | 2761803..2763221 | + | 1419 | WP_001157215.1 | DNA-cytosine methyltransferase | - |
| M9382_RS13490 () | 2763202..2763672 | + | 471 | WP_000228688.1 | VSPR family DNA mismatch endonuclease | - |
| M9382_RS13495 () | 2763661..2764581 | - | 921 | WP_001212270.1 | drug/metabolite exporter YedA | - |
| M9382_RS13500 () | 2764754..2765671 | + | 918 | WP_000922688.1 | DUF808 domain-containing protein | - |
| M9382_RS13505 () | 2765750..2765932 | + | 183 | WP_000009302.1 | DUF2158 domain-containing protein | - |
| M9382_RS13510 () | 2766103..2767797 | + | 1695 | Protein_2624 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|