MGE detailed information
MGE type: Prophage MGE length: 42914 bp
Accession: NZ_CP097837 Location: 2530605..2573518 Organism: Shigella flexneri strain B Replicon: chromosome
Accession: NZ_CP097837 Location: 2530605..2573518 Organism: Shigella flexneri strain B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9380_RS12925 () | 2526029..2527723 | - | 1695 | Protein_2509 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
| M9380_RS12930 () | 2527894..2528076 | - | 183 | WP_000009302.1 | DUF2158 domain-containing protein | - |
| M9380_RS12935 () | 2528155..2529072 | - | 918 | WP_000922688.1 | DUF808 domain-containing protein | - |
| M9380_RS12940 () | 2529245..2530165 | + | 921 | WP_001212270.1 | drug/metabolite exporter YedA | - |
| M9380_RS12945 () | 2530154..2530624 | - | 471 | WP_000228688.1 | VSPR family DNA mismatch endonuclease | - |
| M9380_RS12950 () | 2530605..2532023 | - | 1419 | WP_001157215.1 | DNA-cytosine methyltransferase | - |
| M9380_RS12955 () | 2532090..2532630 | - | 541 | Protein_2515 | phosphohydrolase | - |
| M9380_RS12960 () | 2532670..2532927 | - | 258 | WP_032155863.1 | cell division protein DrpB | - |
| M9380_RS12975 () | 2535218..2535328 | - | 111 | Protein_2519 | IS3 family transposase ISEhe3 | Transposase |
| M9380_RS12980 () | 2535394..2536158 | + | 765 | Protein_2520 | porin | - |
| M9380_RS12990 () | 2537489..2537668 | + | 180 | Protein_2522 | porin | - |
| M9380_RS12995 () | 2538296..2538993 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| M9380_RS13000 () | 2539005..2539952 | - | 948 | Protein_2524 | two-component system sensor histidine kinase HprS | - |
| M9380_RS13005 () | 2539952..2540623 | - | 672 | WP_001347103.1 | Transcriptional regulatory protein HprR | VF |
| M9380_RS13010 () | 2540756..2541169 | + | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| M9380_RS13015 () | 2541278..2542282 | + | 1005 | Protein_2527 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| M9380_RS13020 () | 2542283..2542918 | + | 636 | WP_001240061.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| M9380_RS13025 () | 2543176..2543826 | + | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| M9380_RS13030 () | 2544904..2545173 | - | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| M9380_RS13035 () | 2545230..2545898 | + | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| M9380_RS13040 () | 2546214..2547857 | + | 1644 | WP_011110600.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| M9380_RS13045 () | 2548037..2548516 | - | 480 | Protein_2533 | DUF4376 domain-containing protein | - |
| M9380_RS13050 () | 2548557..2549414 | - | 858 | Protein_2534 | IS3 family transposase IS600 | Transposase |
| M9380_RS13055 () | 2549472..2550169 | + | 698 | WP_232046035.1 | IS1 family transposase IS1X2 | Transposase |
| M9380_RS13060 () | 2550262..2550744 | - | 483 | WP_000594909.1 | hypothetical protein | - |
| M9380_RS13065 () | 2550812..2551465 | - | 654 | Protein_2537 | phage tail tape measure protein | - |
| M9380_RS13070 () | 2551527..2552683 | + | 1157 | WP_094081518.1 | IS3 family transposase IS600 | Transposase |
| M9380_RS13075 () | 2552727..2554028 | - | 1302 | Protein_2539 | phage tail tape measure protein | - |
| M9380_RS13080 () | 2554113..2554448 | - | 336 | WP_001251340.1 | phage tail assembly protein | - |
| M9380_RS13085 () | 2554448..2554804 | - | 357 | WP_001062338.1 | phage tail tube protein | - |
| M9380_RS13090 () | 2554804..2556300 | - | 1497 | WP_000155744.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| M9380_RS13095 () | 2556297..2556458 | - | 162 | WP_000497744.1 | DUF2635 domain-containing protein | - |
| M9380_RS13100 () | 2556468..2556827 | - | 360 | Protein_2544 | hypothetical protein | - |
| M9380_RS13110 () | 2558074..2558298 | - | 225 | Protein_2546 | hypothetical protein | - |
| M9380_RS13115 () | 2558295..2558819 | - | 525 | WP_001076765.1 | hypothetical protein | - |
| M9380_RS13120 () | 2558785..2559201 | - | 417 | WP_000702444.1 | phage head closure protein | - |
| M9380_RS13125 () | 2559198..2559521 | - | 324 | WP_000924704.1 | head-tail connector protein | - |
| M9380_RS13130 () | 2559675..2560487 | - | 813 | Protein_2550 | IS66 family transposase ISSfl3 | Transposase |
| M9380_RS13135 () | 2560484..2560834 | - | 351 | WP_005049241.1 | IS66 family transposase ISSfl3 | Transposase |
| M9380_RS13140 () | 2560831..2561505 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| M9380_RS13145 () | 2561604..2561819 | - | 216 | WP_000839572.1 | class II holin family protein | - |
| M9380_RS13170 () | 2562615..2563303 | - | 689 | Protein_2554 | bacteriophage antitermination protein Q | - |
| M9380_RS13175 () | 2563300..2563665 | - | 366 | WP_000140017.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M9380_RS13180 () | 2563666..2564724 | - | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| M9380_RS13185 () | 2564726..2565004 | - | 279 | WP_011069426.1 | hypothetical protein | - |
| M9380_RS13190 () | 2565172..2565327 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 2565339..2565397 | + | 59 | - | - | Antitoxin Detail |
| M9380_RS13195 () | 2565979..2566395 | - | 417 | WP_005069274.1 | hypothetical protein | - |
| M9380_RS13200 () | 2566422..2566562 | + | 141 | Protein_2560 | DUF4224 domain-containing protein | - |
| M9380_RS13205 () | 2566562..2567602 | + | 1041 | WP_005096324.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| M9380_RS13215 () | 2567813..2568610 | + | 798 | WP_024260703.1 | DgsA anti-repressor MtfA | - |
| M9380_RS13225 () | 2568948..2570210 | + | 1263 | Protein_2563 | Prophage integrase IntA ; Integrase | Integrase |
| M9380_RS13235 () | 2571559..2572047 | + | 489 | Protein_2565 | MFS transporter | - |
| M9380_RS13240 () | 2572112..2573311 | + | 1200 | Protein_2566 | IS3 family transposase IS600 | Transposase |
| M9380_RS13245 () | 2573312..2573518 | + | 207 | WP_000466572.1 | hypothetical protein | - |
| M9380_RS13250 () | 2573620..2575074 | + | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| M9380_RS13255 () | 2575417..2576133 | + | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| M9380_RS13265 () | 2576765..2578392 | - | 1628 | Protein_2570 | toxic metabolite efflux MATE transporter YeeO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|