MGE detailed information
MGE type: IScluster/Tn MGE length: 40274 bp
Accession: NZ_CP097836 Location: 92527..132800 Organism: Shigella flexneri strain C Replicon: plasmid unnamed2
Accession: NZ_CP097836 Location: 92527..132800 Organism: Shigella flexneri strain C Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9379_RS23715 (M9379_23720) | 88066..88302 | + | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
| M9379_RS23720 (M9379_23725) | 88519..89448 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| M9379_RS23725 (M9379_23730) | 90395..91174 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| M9379_RS23730 (M9379_23735) | 91364..92180 | - | 817 | Protein_110 | IS110 family transposase | - |
| M9379_RS23735 (M9379_23740) | 92527..93531 | + | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| M9379_RS23740 (M9379_23745) | 93723..94919 | + | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| M9379_RS23745 (M9379_23750) | 94969..95806 | - | 838 | Protein_113 | IS21 family transposase ISEc62 | Transposase |
| M9379_RS23750 (M9379_23755) | 95789..96130 | - | 342 | Protein_114 | IS21 family transposase ISEc62 | Transposase |
| M9379_RS23755 (M9379_23760) | 96245..97048 | - | 804 | Protein_115 | IS3 family transposase ISKpn38 | Transposase |
| M9379_RS23760 (M9379_23765) | 97089..98153 | - | 1065 | Protein_116 | IS3 family transposase IS600 | Transposase |
| M9379_RS23765 (M9379_23770) | 98491..99945 | - | 1455 | WP_094169927.1 | hypothetical protein | VF |
| M9379_RS23770 (M9379_23775) | 100517..101191 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| M9379_RS23775 (M9379_23780) | 101188..101538 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| M9379_RS23780 (M9379_23785) | 101535..103136 | + | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| M9379_RS23785 (M9379_23790) | 103390..103554 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| M9379_RS23790 (M9379_23795) | 104456..104740 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| M9379_RS23795 (M9379_23800) | 104728..105213 | + | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| M9379_RS23800 (M9379_23805) | 105386..105667 | - | 282 | Protein_124 | IS4 family transposase ISSfl1 | Transposase |
| M9379_RS23805 (M9379_23810) | 105734..106890 | + | 1157 | WP_134796931.1 | IS3 family transposase IS600 | Transposase |
| M9379_RS23810 (M9379_23815) | 107004..108232 | + | 1229 | WP_094081542.1 | IS3 family transposase IS2 | Transposase |
| M9379_RS23815 (M9379_23820) | 108270..108413 | + | 144 | Protein_127 | DUF3440 domain-containing protein | - |
| M9379_RS23820 (M9379_23825) | 108398..109036 | + | 639 | WP_000502862.1 | ParB N-terminal domain-containing protein | - |
| M9379_RS23825 (M9379_23830) | 109264..109688 | + | 425 | Protein_129 | hypothetical protein | - |
| M9379_RS23830 (M9379_23835) | 109683..110879 | - | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| M9379_RS23835 (M9379_23840) | 111130..111603 | + | 474 | WP_005038443.1 | HTH-type transcriptional activator RhaR | VF |
| M9379_RS23840 (M9379_23845) | 111692..112557 | + | 866 | WP_086020993.1 | IS5 family transposase ISSfl7 | Transposase |
| M9379_RS23845 | 112594..112725 | - | 132 | WP_000124143.1 | hypothetical protein | - |
| M9379_RS23850 (M9379_23850) | 112807..113000 | + | 194 | Protein_134 | HNH endonuclease signature motif containing protein | - |
| M9379_RS23855 (M9379_23855) | 113143..113364 | + | 222 | Protein_135 | IS66 family transposase ISCro1 | Transposase |
| M9379_RS23860 (M9379_23860) | 113385..113447 | - | 63 | Protein_136 | IS66 family transposase ISCro1 | Transposase |
| M9379_RS23865 (M9379_23865) | 113897..115309 | + | 1413 | WP_010921643.1 | hypothetical protein | VF |
| M9379_RS23870 (M9379_23870) | 115413..115562 | - | 150 | Protein_138 | IS1 family transposase | - |
| M9379_RS23875 (M9379_23875) | 115638..117335 | + | 1698 | WP_010921642.1 | hypothetical protein | VF |
| M9379_RS23880 (M9379_23880) | 117452..117571 | + | 120 | Protein_140 | IS66 family transposase ISCro1 | Transposase |
| M9379_RS23885 (M9379_23885) | 117738..118010 | + | 273 | WP_258249732.1 | hypothetical protein | - |
| M9379_RS23890 (M9379_23890) | 117991..119198 | + | 1208 | WP_094096874.1 | IS91 family transposase ISSbo1 | Transposase |
| M9379_RS23895 (M9379_23895) | 119574..120290 | - | 717 | Protein_143 | IS21 family transposase IS100kyp | Transposase |
| M9379_RS23900 (M9379_23900) | 120488..121696 | + | 1209 | Protein_144 | IS3 family transposase | - |
| M9379_RS23905 (M9379_23905) | 121799..122296 | + | 498 | Protein_145 | IS66 family transposase ISEc47 | Transposase |
| M9379_RS23910 (M9379_23910) | 122337..122528 | + | 192 | Protein_146 | IS21 family transposase IS100 | Transposase |
| M9379_RS23915 (M9379_23915) | 122622..122831 | - | 210 | Protein_147 | peptidoglycan-binding protein | - |
| M9379_RS23920 (M9379_23920) | 122881..124246 | - | 1366 | Protein_148 | MFS transporter | - |
| M9379_RS23925 (M9379_23925) | 124444..124650 | - | 207 | WP_001145604.1 | hypothetical protein | - |
| M9379_RS23930 (M9379_23930) | 124994..125206 | + | 213 | Protein_150 | DDE-type integrase/transposase/recombinase | - |
| M9379_RS23935 (M9379_23935) | 125250..126458 | - | 1209 | Protein_151 | IS3 family transposase | - |
| M9379_RS23940 (M9379_23940) | 126510..128234 | - | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| M9379_RS23945 (M9379_23945) | 128662..130359 | - | 1698 | WP_010921637.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| M9379_RS23950 (M9379_23950) | 130688..130867 | + | 180 | Protein_154 | transposase | - |
| M9379_RS23960 (M9379_23960) | 131769..132800 | - | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| M9379_RS23965 (M9379_23965) | 132915..133043 | - | 129 | Protein_157 | IS5/IS1182 family transposase | - |
| M9379_RS23975 (M9379_23975) | 134423..134611 | - | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|