MGE detailed information
MGE type: Prophage MGE length: 42914 bp
Accession: NZ_CP097831 Location: 2721132..2764045 Organism: Shigella flexneri strain D Replicon: chromosome
Accession: NZ_CP097831 Location: 2721132..2764045 Organism: Shigella flexneri strain D Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9381_RS13185 () | 2716258..2717885 | + | 1628 | Protein_2566 | toxic metabolite efflux MATE transporter YeeO | - |
| M9381_RS13195 () | 2718517..2719233 | - | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| M9381_RS13200 () | 2719576..2721030 | - | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| M9381_RS13205 () | 2721132..2721338 | - | 207 | WP_000466572.1 | hypothetical protein | - |
| M9381_RS13210 () | 2721339..2722538 | - | 1200 | Protein_2570 | IS3 family transposase IS600 | Transposase |
| M9381_RS13215 () | 2722603..2723091 | - | 489 | Protein_2571 | MFS transporter | - |
| M9381_RS13220 () | 2723165..2724333 | + | 1169 | WP_128599161.1 | IS3 family transposase ISLad1 | Transposase |
| M9381_RS13225 () | 2724440..2725702 | - | 1263 | Protein_2573 | Prophage integrase IntA ; Integrase | Integrase |
| M9381_RS13235 () | 2726040..2726837 | - | 798 | WP_024260703.1 | DgsA anti-repressor MtfA | - |
| M9381_RS13245 () | 2727048..2728088 | - | 1041 | WP_005096324.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| M9381_RS13250 () | 2728088..2728228 | - | 141 | Protein_2576 | DUF4224 domain-containing protein | - |
| M9381_RS13255 () | 2728255..2728671 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - | 2729253..2729311 | - | 59 | - | - | Antitoxin Detail |
| M9381_RS13260 () | 2729323..2729478 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| M9381_RS13265 () | 2729646..2729924 | + | 279 | WP_011069426.1 | hypothetical protein | - |
| M9381_RS13270 () | 2729926..2730984 | + | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| M9381_RS13275 () | 2730985..2731350 | + | 366 | WP_000140017.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M9381_RS13280 () | 2731347..2732035 | + | 689 | Protein_2582 | bacteriophage antitermination protein Q | - |
| M9381_RS13305 () | 2732831..2733046 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| M9381_RS13310 () | 2733145..2733819 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| M9381_RS13315 () | 2733816..2734166 | + | 351 | WP_005049241.1 | IS66 family transposase ISSfl3 | Transposase |
| M9381_RS13320 () | 2734163..2734975 | + | 813 | Protein_2586 | IS66 family transposase ISSfl3 | Transposase |
| M9381_RS13325 () | 2735129..2735452 | + | 324 | WP_000924704.1 | head-tail connector protein | - |
| M9381_RS13330 () | 2735449..2735865 | + | 417 | WP_000702444.1 | phage head closure protein | - |
| M9381_RS13335 () | 2735831..2736355 | + | 525 | WP_001076765.1 | hypothetical protein | - |
| M9381_RS13340 () | 2736352..2736576 | + | 225 | Protein_2590 | hypothetical protein | - |
| M9381_RS13345 () | 2736642..2737798 | + | 1157 | WP_094081558.1 | IS3 family transposase IS600 | Transposase |
| M9381_RS13350 () | 2737823..2738182 | + | 360 | Protein_2592 | hypothetical protein | - |
| M9381_RS13355 () | 2738192..2738353 | + | 162 | WP_000497744.1 | DUF2635 domain-containing protein | - |
| M9381_RS13360 () | 2738350..2739846 | + | 1497 | WP_000155744.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| M9381_RS13365 () | 2739846..2740202 | + | 357 | WP_001062338.1 | phage tail tube protein | - |
| M9381_RS13370 () | 2740202..2740537 | + | 336 | WP_001251340.1 | phage tail assembly protein | - |
| M9381_RS13375 () | 2740622..2741923 | + | 1302 | Protein_2597 | phage tail tape measure protein | - |
| M9381_RS13385 () | 2743185..2743838 | + | 654 | Protein_2599 | phage tail tape measure protein | - |
| M9381_RS13390 () | 2743906..2744388 | + | 483 | WP_000594909.1 | hypothetical protein | - |
| M9381_RS13400 () | 2745236..2746093 | + | 858 | Protein_2602 | IS3 family transposase IS600 | Transposase |
| M9381_RS13405 () | 2746134..2746613 | + | 480 | Protein_2603 | DUF4376 domain-containing protein | - |
| M9381_RS13410 () | 2746793..2748436 | - | 1644 | WP_011110600.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| M9381_RS13415 () | 2748752..2749420 | - | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| M9381_RS13420 () | 2749477..2749746 | + | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| M9381_RS13425 () | 2750824..2751474 | - | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| M9381_RS13430 () | 2751732..2752367 | - | 636 | WP_001240061.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| M9381_RS13435 () | 2752368..2753372 | - | 1005 | Protein_2609 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| M9381_RS13440 () | 2753481..2753894 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| M9381_RS13445 () | 2754027..2754698 | + | 672 | WP_001347103.1 | Transcriptional regulatory protein HprR | VF |
| M9381_RS13450 () | 2754698..2755645 | + | 948 | Protein_2612 | two-component system sensor histidine kinase HprS | - |
| M9381_RS13460 () | 2756982..2757161 | - | 180 | Protein_2614 | porin | - |
| M9381_RS13465 () | 2757255..2758483 | + | 1229 | WP_111778310.1 | IS3 family transposase IS2 | Transposase |
| M9381_RS13470 () | 2758492..2759256 | - | 765 | Protein_2616 | porin | - |
| M9381_RS13475 () | 2759322..2759432 | + | 111 | Protein_2617 | IS3 family transposase ISEhe3 | Transposase |
| M9381_RS13480 () | 2759501..2760669 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| M9381_RS13485 () | 2760626..2761722 | + | 1097 | WP_232046048.1 | IS3 family transposase ISEhe3 | Transposase |
| M9381_RS13490 () | 2761723..2761980 | + | 258 | WP_032155863.1 | cell division protein DrpB | - |
| M9381_RS13495 () | 2762020..2762560 | + | 541 | Protein_2621 | phosphohydrolase | - |
| M9381_RS13500 () | 2762627..2764045 | + | 1419 | WP_001157215.1 | DNA-cytosine methyltransferase | - |
| M9381_RS13505 () | 2764026..2764496 | + | 471 | WP_000228688.1 | VSPR family DNA mismatch endonuclease | - |
| M9381_RS13510 () | 2764485..2765405 | - | 921 | WP_001212270.1 | drug/metabolite exporter YedA | - |
| M9381_RS13515 () | 2765578..2766495 | + | 918 | WP_000922688.1 | DUF808 domain-containing protein | - |
| M9381_RS13520 () | 2766574..2766756 | + | 183 | WP_000009302.1 | DUF2158 domain-containing protein | - |
| M9381_RS13525 () | 2766927..2768621 | + | 1695 | Protein_2627 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|