MGE detailed information
MGE type: IScluster/Tn MGE length: 40274 bp
Accession: NZ_CP097829 Location: 10345..50618 Organism: Shigella flexneri strain E Replicon: plasmid unnamed1
Accession: NZ_CP097829 Location: 10345..50618 Organism: Shigella flexneri strain E Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9383_RS22825 (M9383_22835) | 5884..6120 | + | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
| M9383_RS22830 (M9383_22840) | 6337..7266 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| M9383_RS22835 (M9383_22845) | 8213..8992 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| M9383_RS22840 (M9383_22850) | 9182..9998 | - | 817 | Protein_8 | IS110 family transposase | - |
| M9383_RS22845 (M9383_22855) | 10345..11349 | + | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| M9383_RS22850 (M9383_22860) | 11541..12737 | + | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| M9383_RS22855 (M9383_22865) | 12787..13624 | - | 838 | Protein_11 | IS21 family transposase ISEc62 | Transposase |
| M9383_RS22860 (M9383_22870) | 13607..13948 | - | 342 | Protein_12 | IS21 family transposase ISEc62 | Transposase |
| M9383_RS22865 (M9383_22875) | 14063..14866 | - | 804 | Protein_13 | IS3 family transposase ISKpn38 | Transposase |
| M9383_RS22870 (M9383_22880) | 14907..15971 | - | 1065 | Protein_14 | IS3 family transposase IS600 | Transposase |
| M9383_RS22875 (M9383_22885) | 16309..17763 | - | 1455 | WP_094169927.1 | hypothetical protein | VF |
| M9383_RS22880 (M9383_22890) | 18335..19009 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| M9383_RS22885 (M9383_22895) | 19006..19356 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| M9383_RS22890 (M9383_22900) | 19353..20954 | + | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| M9383_RS22895 (M9383_22905) | 21208..21372 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| M9383_RS22900 (M9383_22910) | 22274..22558 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| M9383_RS22905 (M9383_22915) | 22546..23031 | + | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| M9383_RS22910 (M9383_22920) | 23204..23485 | - | 282 | Protein_22 | IS4 family transposase ISSfl1 | Transposase |
| M9383_RS22915 (M9383_22925) | 23552..24708 | + | 1157 | WP_134796931.1 | IS3 family transposase IS600 | Transposase |
| M9383_RS22920 (M9383_22930) | 24822..26050 | + | 1229 | WP_094081542.1 | IS3 family transposase IS2 | Transposase |
| M9383_RS22925 (M9383_22935) | 26088..26231 | + | 144 | Protein_25 | DUF3440 domain-containing protein | - |
| M9383_RS22930 (M9383_22940) | 26216..26854 | + | 639 | WP_000502862.1 | ParB N-terminal domain-containing protein | - |
| M9383_RS22935 (M9383_22945) | 27082..27506 | + | 425 | Protein_27 | hypothetical protein | - |
| M9383_RS22940 (M9383_22950) | 27501..28697 | - | 1197 | WP_005063228.1 | IS110 family transposase ISSfl4 | Transposase |
| M9383_RS22945 (M9383_22955) | 28948..29421 | + | 474 | WP_005038443.1 | HTH-type transcriptional activator RhaR | VF |
| M9383_RS22950 (M9383_22960) | 29510..30375 | + | 866 | WP_086020993.1 | IS5 family transposase ISSfl7 | Transposase |
| M9383_RS22955 | 30412..30543 | - | 132 | WP_000124143.1 | hypothetical protein | - |
| M9383_RS22960 (M9383_22965) | 30625..30818 | + | 194 | Protein_32 | HNH endonuclease signature motif containing protein | - |
| M9383_RS22965 (M9383_22970) | 30961..31182 | + | 222 | Protein_33 | IS66 family transposase ISCro1 | Transposase |
| M9383_RS22970 (M9383_22975) | 31203..31265 | - | 63 | Protein_34 | IS66 family transposase ISCro1 | Transposase |
| M9383_RS22975 (M9383_22980) | 31715..33127 | + | 1413 | WP_010921643.1 | hypothetical protein | VF |
| M9383_RS22980 (M9383_22985) | 33231..33380 | - | 150 | Protein_36 | IS1 family transposase | - |
| M9383_RS22985 (M9383_22990) | 33456..35153 | + | 1698 | WP_010921642.1 | hypothetical protein | VF |
| M9383_RS22990 (M9383_22995) | 35270..35389 | + | 120 | Protein_38 | IS66 family insertion sequence element accessory protein TnpB | - |
| M9383_RS22995 (M9383_23000) | 35556..35828 | + | 273 | WP_258249732.1 | hypothetical protein | - |
| M9383_RS23000 (M9383_23005) | 35809..37016 | + | 1208 | WP_094096874.1 | IS91 family transposase ISSbo1 | Transposase |
| M9383_RS23005 (M9383_23010) | 37392..38108 | - | 717 | Protein_41 | IS21 family transposase IS100kyp | Transposase |
| M9383_RS23010 (M9383_23015) | 38306..39514 | + | 1209 | Protein_42 | IS3 family transposase | - |
| M9383_RS23015 (M9383_23020) | 39617..40114 | + | 498 | Protein_43 | IS66 family transposase ISEc47 | Transposase |
| M9383_RS23020 (M9383_23025) | 40155..40346 | + | 192 | Protein_44 | IS21 family transposase IS100 | Transposase |
| M9383_RS23025 (M9383_23030) | 40440..40649 | - | 210 | Protein_45 | peptidoglycan-binding protein | - |
| M9383_RS23030 (M9383_23035) | 40699..42064 | - | 1366 | Protein_46 | MFS transporter | - |
| M9383_RS23035 (M9383_23040) | 42262..42468 | - | 207 | WP_001145604.1 | hypothetical protein | - |
| M9383_RS23040 (M9383_23045) | 42812..43024 | + | 213 | Protein_48 | DDE-type integrase/transposase/recombinase | - |
| M9383_RS23045 (M9383_23050) | 43068..44276 | - | 1209 | Protein_49 | IS3 family transposase | - |
| M9383_RS23050 (M9383_23055) | 44328..46052 | - | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| M9383_RS23055 (M9383_23060) | 46480..48177 | - | 1698 | WP_010921637.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| M9383_RS23060 (M9383_23065) | 48506..48685 | + | 180 | Protein_52 | transposase | - |
| M9383_RS23070 (M9383_23075) | 49587..50618 | - | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| M9383_RS23075 (M9383_23080) | 50733..50861 | - | 129 | Protein_55 | IS5/IS1182 family transposase | - |
| M9383_RS23085 (M9383_23090) | 52241..52429 | - | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|