MGE detailed information
MGE type: Prophage MGE length: 33755 bp
Accession: NZ_CP097828 Location: 4474550..4508304 Organism: Shigella flexneri strain E Replicon: chromosome
Accession: NZ_CP097828 Location: 4474550..4508304 Organism: Shigella flexneri strain E Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9383_RS22525 () | 4470120..4470935 | + | 816 | WP_000156575.1 | helix-turn-helix transcriptional regulator | - |
| M9383_RS22530 () | 4471109..4471325 | - | 217 | Protein_4381 | LysR family transcriptional regulator | - |
| M9383_RS22535 () | 4471325..4471468 | + | 144 | Protein_4382 | AbgT family transporter | - |
| M9383_RS22540 () | 4471479..4471994 | + | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| M9383_RS22545 () | 4472189..4472941 | + | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| M9383_RS22550 () | 4473093..4474043 | + | 951 | WP_001262146.1 | universal stress protein UspE | - |
| M9383_RS22555 () | 4474093..4474350 | - | 258 | Protein_4386 | DUF2534 family protein | - |
| M9383_RS22560 () | 4474550..4475362 | - | 813 | Protein_4387 | IS3 family transposase ISLad1 | Transposase |
| M9383_RS22565 () | 4475447..4475812 | + | 366 | WP_000124119.1 | hypothetical protein | - |
| M9383_RS22570 () | 4475812..4476999 | + | 1188 | WP_000937573.1 | IS91 family transposase ISEc37 | Transposase |
| M9383_RS22575 () | 4477183..4477547 | - | 365 | Protein_4390 | IS3 family transposase IS911 | Transposase |
| M9383_RS22580 () | 4477675..4478706 | + | 1032 | WP_258248015.1 | low conductance mechanosensitive channel YnaI | - |
| M9383_RS22585 () | 4478757..4480370 | - | 1614 | WP_000683016.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| M9383_RS22590 () | 4480707..4481174 | - | 468 | Protein_4393 | DNA-binding transcriptional regulator PgrR | - |
| M9383_RS22595 () | 4481238..4481548 | + | 311 | Protein_4394 | IS3 family transposase ISSfl10 | Transposase |
| M9383_RS22600 () | 4481591..4482800 | - | 1210 | Protein_4395 | IS3 family transposase IS629 | Transposase |
| M9383_RS22605 () | 4482855..4483703 | + | 849 | Protein_4396 | IS3 family transposase ISSd1 | Transposase |
| M9383_RS22610 () | 4483820..4484101 | + | 282 | WP_005127484.1 | excisionase | - |
| M9383_RS22615 () | 4484067..4485143 | + | 1077 | Protein_4398 | hypothetical protein ; Integrase | Integrase |
| - | 4485274..4485508 | + | 235 | - | - | Antitoxin Detail |
| - | 4485275..4485378 | - | 104 | - | - | Toxin Detail |
| M9383_RS22620 () | 4485536..4485877 | - | 342 | WP_000976476.1 | YebY family protein | - |
| M9383_RS22625 () | 4485890..4486762 | - | 873 | Protein_4400 | copper homeostasis membrane protein CopD | - |
| M9383_RS22630 () | 4486766..4487140 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| M9383_RS22635 () | 4487279..4487509 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| M9383_RS22640 () | 4487611..4488267 | + | 657 | Protein_4403 | carbon-nitrogen hydrolase family protein YobB | - |
| M9383_RS22645 () | 4488291..4488953 | + | 663 | WP_000944271.1 | exodeoxyribonuclease X | - |
| M9383_RS22650 () | 4488950..4491010 | - | 2061 | WP_000936980.1 | oligopeptidase B | - |
| M9383_RS22655 () | 4491220..4491879 | - | 660 | WP_000024751.1 | tellurite resistance TerB family protein | - |
| M9383_RS22660 () | 4492206..4492562 | - | 357 | WP_005062375.1 | protein YebF | - |
| M9383_RS22665 () | 4492629..4492871 | - | 243 | Protein_4408 | YebG family protein | - |
| M9383_RS22670 () | 4493053..4494231 | + | 1179 | WP_000173488.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| M9383_RS22675 () | 4494287..4494928 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| M9383_RS22680 () | 4494965..4496167 | - | 1203 | Protein_4411 | phosphogluconate dehydratase | - |
| M9383_RS22690 () | 4496936..4497553 | - | 618 | Protein_4413 | dihydroxy-acid dehydratase | - |
| M9383_RS22695 () | 4497788..4499263 | - | 1476 | WP_000301736.1 | glucose-6-phosphate dehydrogenase | - |
| M9383_RS22700 () | 4499600..4500469 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| M9383_RS22705 () | 4500597..4502039 | + | 1443 | WP_000044415.1 | pyruvate kinase | - |
| M9383_RS22710 () | 4502170..4503141 | - | 972 | WP_000448385.1 | Lipid A biosynthesis myristoyltransferase 1 | VF |
| M9383_RS22715 () | 4503261..4504583 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| M9383_RS22720 () | 4504599..4505531 | - | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| M9383_RS22725 () | 4505610..4506365 | + | 756 | WP_000202992.1 | Zinc import ATP-binding protein ZnuC | VF |
| M9383_RS22730 () | 4506362..4507147 | + | 786 | WP_000571470.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| M9383_RS22735 () | 4507294..4508304 | - | 1011 | WP_000568525.1 | Holliday junction branch migration DNA helicase RuvB | - |
| M9383_RS22740 () | 4508313..4508924 | - | 612 | WP_000580324.1 | Holliday junction branch migration protein RuvA | - |
| M9383_RS22745 () | 4509063..4509128 | - | 66 | WP_001386853.1 | stress response small protein YobI | - |
| M9383_RS22750 () | 4509197..4509799 | + | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| M9383_RS22755 () | 4509801..4510322 | - | 522 | WP_000974712.1 | crossover junction endodeoxyribonuclease RuvC | - |
| M9383_RS22760 () | 4510357..4511097 | - | 741 | WP_258248021.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| M9383_RS22765 () | 4511126..4511578 | - | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|