MGE detailed information
MGE type: Prophage MGE length: 21638 bp
Accession: NZ_CP097828 Location: 4171811..4193448 Organism: Shigella flexneri strain E Replicon: chromosome
Accession: NZ_CP097828 Location: 4171811..4193448 Organism: Shigella flexneri strain E Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9383_RS20970 (4167657) | 4167657..4168421 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| M9383_RS20975 (4168737) | 4168737..4169216 | + | 480 | Protein_4075 | cupin domain-containing protein | - |
| M9383_RS20980 (4169271) | 4169271..4169968 | + | 698 | WP_223368647.1 | IS1 family transposase | - |
| M9383_RS20985 (4169962) | 4169962..4170129 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| M9383_RS20990 (4170531) | 4170531..4171292 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| M9383_RS20995 (4171360) | 4171360..4171563 | - | 204 | WP_000543383.1 | two-component system connector SafA | - |
| M9383_RS21000 (4171811) | 4171811..4174090 | - | 2280 | WP_000726665.1 | acid resistance putative oxidoreductase YdeP | - |
| M9383_RS21005 (4174424) | 4174424..4174852 | - | 429 | Protein_4081 | Type 1 fimbrin D-mannose specific adhesin | VF |
| M9383_RS21010 (4174909) | 4174909..4175606 | + | 698 | WP_232046037.1 | IS1 family transposase IS1X2 | Transposase |
| M9383_RS21015 (4175624) | 4175624..4176502 | + | 879 | Protein_4083 | IS3 family transposase ISSd1 | Transposase |
| M9383_RS21020 (4176499) | 4176499..4176804 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| M9383_RS21025 (4176829) | 4176829..4177068 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| M9383_RS21030 (4177068) | 4177068..4177355 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| M9383_RS21035 (4177427) | 4177427..4177582 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| M9383_RS21040 (4177800) | 4177800..4178015 | + | 216 | WP_000980986.1 | hypothetical protein | - |
| M9383_RS21045 (4178118) | 4178118..4178396 | + | 279 | Protein_4089 | hypothetical protein | - |
| M9383_RS21050 (4178398) | 4178398..4179447 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| M9383_RS21055 (4179460) | 4179460..4179816 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M9383_RS21060 (4179831) | 4179831..4180652 | + | 822 | WP_000762884.1 | antitermination protein | - |
| M9383_RS21075 (4181573) | 4181573..4181681 | + | 109 | Protein_4093 | DUF3927 family protein | - |
| M9383_RS21080 (4181962) | 4181962..4182297 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| M9383_RS21085 (4182557) | 4182557..4182742 | + | 186 | Protein_4095 | DUF1737 domain-containing protein | - |
| M9383_RS21090 (4182742) | 4182742..4182903 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| M9383_RS21095 (4183053) | 4183053..4183232 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| M9383_RS21105 (4184475) | 4184475..4185494 | + | 1020 | Protein_4099 | MHS family MFS transporter YdfJ | - |
| M9383_RS21110 (4185583) | 4185583..4187043 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| M9383_RS21115 (4187079) | 4187079..4187282 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| M9383_RS21120 (4187460) | 4187460..4188146 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| M9383_RS21125 (4188235) | 4188235..4188981 | - | 747 | WP_005050098.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| M9383_RS21130 (4189118) | 4189118..4191163 | + | 2046 | WP_005062627.1 | peptidyl-dipeptidase Dcp | - |
| M9383_RS21135 (4191208) | 4191208..4191726 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| M9383_RS21140 (4192002) | 4192002..4192226 | + | 225 | Protein_4106 | YdeI family stress tolerance OB fold protein | - |
| M9383_RS21145 (4192292) | 4192292..4193448 | + | 1157 | WP_094081518.1 | IS3 family transposase IS600 | Transposase |
| M9383_RS21150 (4193593) | 4193593..4193696 | - | 104 | Protein_4108 | protein MgtT | - |
| M9383_RS21155 (4193696) | 4193696..4193791 | - | 96 | WP_000901367.1 | protein MgtS | - |
| M9383_RS21160 (4193918) | 4193918..4195033 | - | 1116 | Protein_4110 | efflux MFS transporter YdeE | - |
| M9383_RS21170 (4195300) | 4195300..4196199 | + | 900 | WP_000087223.1 | O-acetylserine/cysteine exporter | - |
| M9383_RS21175 (4196230) | 4196230..4196448 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| M9383_RS21180 (4196480) | 4196480..4196863 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| M9383_RS21185 (4196883) | 4196883..4197317 | - | 435 | WP_000843421.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| M9383_RS21190 (4197529) | 4197529..4198194 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|