MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 127340 bp
Accession: NZ_CP097689 Location: 1..127340 Organism: Klebsiella pneumoniae strain IR12079_1 Replicon: plasmid unnamed1
Accession: NZ_CP097689 Location: 1..127340 Organism: Klebsiella pneumoniae strain IR12079_1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M3X89_RS27675 (M3X89_27675) | 133..1141 | + | 1009 | Protein_0 | RepB family plasmid replication initiator protein | - |
| M3X89_RS27680 (M3X89_27680) | 1859..2599 | - | 741 | WP_020324066.1 | tyrosine-type recombinase/integrase | - |
| M3X89_RS27685 (M3X89_27685) | 3743..4690 | + | 948 | WP_004182028.1 | sensor domain-containing diguanylate cyclase | - |
| M3X89_RS27690 (M3X89_27690) | 4717..4959 | - | 243 | WP_074428705.1 | EAL domain-containing protein | - |
| M3X89_RS27695 (M3X89_27695) | 5048..6016 | + | 969 | WP_068814619.1 | IS5 family transposase IS903B | Transposase |
| M3X89_RS27700 (M3X89_27700) | 6689..6946 | - | 258 | WP_004197688.1 | hypothetical protein | - |
| M3X89_RS27705 (M3X89_27705) | 7586..8101 | + | 516 | Protein_6 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| M3X89_RS27710 (M3X89_27710) | 8165..9001 | + | 837 | WP_004178087.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| M3X89_RS27715 (M3X89_27715) | 9984..11261 | - | 1278 | WP_004152070.1 | DUF2254 domain-containing protein | - |
| M3X89_RS27720 (M3X89_27720) | 11324..13321 | - | 1998 | WP_004178088.1 | choline BCCT transporter BetT | - |
| M3X89_RS27735 (M3X89_27735) | 15659..16143 | + | 485 | Protein_12 | IS1 family transposase IS1X2 | Transposase |
| M3X89_RS27740 (M3X89_27740) | 16159..16701 | + | 543 | Protein_13 | ISL3 family transposase ISKpn25 | Transposase |
| M3X89_RS27745 (M3X89_27745) | 16997..17428 | - | 432 | WP_004178091.1 | silver-binding protein SilE | - |
| M3X89_RS27750 (M3X89_27750) | 17679..19154 | - | 1476 | WP_003032875.1 | copper/silver sensor histidine kinase SilS | - |
| M3X89_RS27755 (M3X89_27755) | 19147..19827 | - | 681 | WP_001572351.1 | Transcriptional regulatory protein CusR | VF |
| M3X89_RS27760 (M3X89_27760) | 20017..21402 | + | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| M3X89_RS27765 (M3X89_27765) | 21431..21784 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| M3X89_RS27770 (M3X89_27770) | 21898..23190 | + | 1293 | WP_004098959.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| M3X89_RS27775 (M3X89_27775) | 23201..26347 | + | 3147 | WP_004098958.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| M3X89_RS27780 (M3X89_27780) | 26434..26874 | + | 441 | WP_000758228.1 | DUF411 domain-containing protein | - |
| M3X89_RS27785 (M3X89_27785) | 27001..29448 | + | 2448 | WP_004098955.1 | Ag(+)-translocating P-type ATPase SilP | - |
| M3X89_RS27790 (M3X89_27790) | 29489..29686 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| M3X89_RS27795 (M3X89_27795) | 29720..30457 | - | 738 | WP_004118669.1 | Murein DD-endopeptidase MepM | VF |
| M3X89_RS27800 (M3X89_27800) | 30746..31195 | - | 450 | WP_001023257.1 | copper resistance protein | - |
| M3X89_RS27805 (M3X89_27805) | 31429..33246 | + | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| M3X89_RS27810 (M3X89_27810) | 33252..34142 | + | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| M3X89_RS27815 (M3X89_27815) | 34182..34562 | + | 381 | WP_001549790.1 | copper resistance system metallochaperone PcoC | - |
| M3X89_RS27820 (M3X89_27820) | 34567..35496 | + | 930 | WP_004118344.1 | copper resistance inner membrane protein PcoD | - |
| M3X89_RS27825 (M3X89_27825) | 35551..36231 | + | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| M3X89_RS27830 (M3X89_27830) | 36228..37628 | + | 1401 | WP_002436614.1 | copper resistance membrane spanning protein PcoS | - |
| M3X89_RS27835 (M3X89_27835) | 37844..38278 | + | 435 | WP_004118347.1 | hypothetical protein | - |
| M3X89_RS27840 (M3X89_27840) | 38458..38620 | - | 163 | Protein_33 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| M3X89_RS27845 (M3X89_27845) | 38657..38755 | - | 99 | WP_032445197.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| M3X89_RS27850 (M3X89_27850) | 38742..38921 | - | 180 | WP_004118349.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| M3X89_RS27855 (M3X89_27855) | 39234..39497 | + | 264 | WP_009310051.1 | hypothetical protein | - |
| M3X89_RS27860 (M3X89_27860) | 39494..40060 | + | 567 | WP_009310052.1 | hypothetical protein | - |
| M3X89_RS27865 (M3X89_27865) | 40091..40585 | + | 495 | WP_004213594.1 | hypothetical protein | - |
| M3X89_RS27870 (M3X89_27870) | 40646..40849 | + | 204 | WP_004150739.1 | HHA domain-containing protein | - |
| M3X89_RS27875 (M3X89_27875) | 40943..42063 | + | 1121 | WP_249232928.1 | IS3 family transposase ISEc52 | Transposase |
| M3X89_RS27880 (M3X89_27880) | 42109..43077 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| M3X89_RS27885 (M3X89_27885) | 43607..45160 | - | 1554 | WP_020324174.1 | L-lactate permease | - |
| M3X89_RS27890 (M3X89_27890) | 45596..47293 | + | 1698 | WP_047670018.1 | D-lactate dehydrogenase | - |
| M3X89_RS27895 (M3X89_27895) | 47368..48087 | + | 720 | WP_001102107.1 | (Fe-S)-binding protein | - |
| M3X89_RS27900 (M3X89_27900) | 48098..49525 | + | 1428 | WP_000023895.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| M3X89_RS27905 (M3X89_27905) | 49518..50213 | + | 696 | WP_004118595.1 | lactate utilization protein C | - |
| M3X89_RS27910 (M3X89_27910) | 50263..50643 | - | 381 | Protein_47 | gluconate permease | - |
| M3X89_RS27915 (M3X89_27915) | 50854..51165 | + | 312 | WP_004118600.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| M3X89_RS27920 (M3X89_27920) | 51162..51581 | + | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| M3X89_RS27925 (M3X89_27925) | 51618..52820 | - | 1203 | WP_003031541.1 | hypothetical protein | - |
| M3X89_RS27930 (M3X89_27930) | 52813..53142 | - | 330 | WP_004118613.1 | hypothetical protein | - |
| M3X89_RS27935 (M3X89_27935) | 53139..53798 | - | 660 | WP_000078540.1 | hypothetical protein | - |
| M3X89_RS27940 (M3X89_27940) | 54222..54530 | - | 309 | WP_020324596.1 | Ref family recombination enhancement nuclease | - |
| M3X89_RS27945 (M3X89_27945) | 54698..54838 | - | 141 | WP_004118614.1 | hypothetical protein | - |
| M3X89_RS27950 (M3X89_27950) | 55131..55484 | + | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| M3X89_RS27955 (M3X89_27955) | 55532..55894 | + | 363 | WP_020324593.1 | arsenite efflux transporter metallochaperone ArsD | - |
| M3X89_RS27960 (M3X89_27960) | 55912..57663 | + | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| M3X89_RS27965 (M3X89_27965) | 57712..59001 | + | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| M3X89_RS27970 (M3X89_27970) | 59014..59439 | + | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| M3X89_RS27975 (M3X89_27975) | 59470..59763 | - | 294 | Protein_60 | ArsA-related P-loop ATPase | - |
| M3X89_RS27980 (M3X89_27980) | 59919..60232 | - | 314 | Protein_61 | Tn3 family transposase | - |
| M3X89_RS27985 (M3X89_27985) | 60259..61011 | - | 753 | WP_020324592.1 | alpha/beta hydrolase | - |
| M3X89_RS27990 (M3X89_27990) | 61253..62083 | + | 831 | WP_020324597.1 | DMT family transporter | - |
| M3X89_RS27995 (M3X89_27995) | 62214..63437 | + | 1224 | WP_000872613.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| M3X89_RS28000 (M3X89_28000) | 63623..64396 | - | 774 | WP_001091224.1 | SDR family oxidoreductase | - |
| M3X89_RS28005 (M3X89_28005) | 64462..65163 | - | 702 | WP_008502228.1 | DsbA family oxidoreductase | - |
| M3X89_RS28010 (M3X89_28010) | 65229..66335 | - | 1107 | WP_006687059.1 | alkene reductase | - |
| M3X89_RS28015 (M3X89_28015) | 66548..66877 | + | 330 | WP_008502229.1 | thioredoxin family protein | - |
| M3X89_RS28020 (M3X89_28020) | 66907..67245 | - | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| M3X89_RS28025 (M3X89_28025) | 67250..67831 | - | 582 | WP_008502230.1 | HTH-type transcriptional repressor NemR | VF |
| M3X89_RS28030 (M3X89_28030) | 67973..68530 | - | 558 | WP_032445547.1 | OsmC family protein | - |
| M3X89_RS28035 (M3X89_28035) | 68717..69085 | - | 369 | Protein_72 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| M3X89_RS28040 (M3X89_28040) | 69150..69854 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3X89_RS28045 (M3X89_28045) | 69907..70047 | + | 141 | Protein_74 | IS6 family transposase IS15DI | Transposase |
| M3X89_RS28050 (M3X89_28050) | 70269..71273 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| M3X89_RS28055 (M3X89_28055) | 71455..71992 | - | 538 | Protein_76 | DUF2913 family protein | - |
| M3X89_RS28060 (M3X89_28060) | 72684..72860 | - | 177 | WP_227599551.1 | creatininase family protein | - |
| M3X89_RS28065 (M3X89_28065) | 72833..72994 | - | 162 | WP_023157916.1 | creatininase family protein | - |
| M3X89_RS28070 (M3X89_28070) | 73136..73459 | - | 324 | WP_048255496.1 | DUF1380 family protein | - |
| M3X89_RS28075 (M3X89_28075) | 73544..73780 | - | 237 | WP_086556679.1 | hypothetical protein | - |
| M3X89_RS28080 (M3X89_28080) | 74079..74309 | - | 231 | WP_032440563.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| M3X89_RS28085 (M3X89_28085) | 74407..74745 | - | 339 | WP_004187354.1 | hypothetical protein | - |
| M3X89_RS28090 (M3X89_28090) | 74935..75795 | - | 861 | WP_032440562.1 | DUF4942 domain-containing protein | - |
| M3X89_RS28095 (M3X89_28095) | 75868..76047 | - | 180 | WP_023285836.1 | hypothetical protein | - |
| M3X89_RS28100 (M3X89_28100) | 76690..76956 | - | 267 | WP_023285835.1 | helix-turn-helix transcriptional regulator | - |
| M3X89_RS28105 (M3X89_28105) | 77001..77450 | - | 450 | WP_032440561.1 | JAB domain-containing protein | - |
| M3X89_RS28110 (M3X89_28110) | 77568..78065 | - | 498 | WP_032440560.1 | hypothetical protein | - |
| M3X89_RS28115 (M3X89_28115) | 78058..78564 | - | 507 | WP_223174614.1 | hypothetical protein | - |
| M3X89_RS28120 (M3X89_28120) | 78745..79188 | - | 444 | WP_032440559.1 | plasmid partitioning/stability family protein | - |
| M3X89_RS28125 (M3X89_28125) | 79191..80165 | - | 975 | WP_032440558.1 | plasmid segregation protein ParM | - |
| M3X89_RS28130 (M3X89_28130) | 80406..81146 | - | 741 | WP_032440557.1 | tyrosine-type recombinase/integrase | - |
| M3X89_RS28135 (M3X89_28135) | 81213..81698 | - | 486 | WP_032440556.1 | hypothetical protein | - |
| M3X89_RS28140 (M3X89_28140) | 81783..82031 | - | 249 | WP_032440555.1 | helix-turn-helix domain-containing protein | - |
| M3X89_RS28145 (M3X89_28145) | 82816..83874 | + | 1059 | WP_032440554.1 | hypothetical protein | - |
| M3X89_RS28150 (M3X89_28150) | 83867..84076 | + | 210 | WP_032440553.1 | hypothetical protein | - |
| M3X89_RS28155 (M3X89_28155) | 84148..84432 | + | 285 | WP_015344981.1 | hypothetical protein | - |
| M3X89_RS28160 (M3X89_28160) | 84572..85213 | - | 642 | WP_032440552.1 | hypothetical protein | - |
| M3X89_RS28165 (M3X89_28165) | 85449..85778 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| M3X89_RS28170 (M3X89_28170) | 85759..86040 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| M3X89_RS28175 (M3X89_28175) | 86187..86663 | - | 477 | WP_194164765.1 | DUF4113 domain-containing protein | - |
| M3X89_RS28180 (M3X89_28180) | 86753..88504 | - | 1752 | Protein_101 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| M3X89_RS28185 (M3X89_28185) | 88508..88900 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| M3X89_RS28190 (M3X89_28190) | 89038..89922 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| M3X89_RS28195 (M3X89_28195) | 89954..91153 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| M3X89_RS28200 (M3X89_28200) | 91259..91909 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| M3X89_RS28205 (M3X89_28205) | 91941..92183 | - | 243 | WP_000844627.1 | transposase | - |
| M3X89_RS28210 (M3X89_28210) | 92386..92859 | + | 474 | WP_000777554.1 | Dihydrofolate reductase type 1 | ARG |
| M3X89_RS28215 (M3X89_28215) | 93563..93910 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| M3X89_RS28220 (M3X89_28220) | 93904..94743 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| M3X89_RS28225 (M3X89_28225) | 94871..95371 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| M3X89_RS28230 (M3X89_28230) | 95692..95760 | + | 69 | Protein_111 | EAL domain-containing protein | - |
| M3X89_RS28235 (M3X89_28235) | 95878..96642 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| M3X89_RS28240 (M3X89_28240) | 97135..97719 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| M3X89_RS28245 (M3X89_28245) | 97719..98957 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| M3X89_RS28250 (M3X89_28250) | 98954..99859 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| M3X89_RS28255 (M3X89_28255) | 99981..100685 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3X89_RS28260 (M3X89_28260) | 100836..101651 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| M3X89_RS28265 (M3X89_28265) | 101841..102545 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3X89_RS28270 (M3X89_28270) | 102570..104126 | + | 1557 | WP_108458839.1 | Aerotaxis receptor | VF |
| M3X89_RS28275 (M3X89_28275) | 104454..105215 | + | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| M3X89_RS28280 (M3X89_28280) | 105236..106096 | - | 861 | WP_002904004.1 | Beta-lactamase SHV-2 | ARG |
| M3X89_RS28285 (M3X89_28285) | 106233..106937 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M3X89_RS28290 (M3X89_28290) | 107090..109408 | - | 2319 | Protein_123 | Multifunctional conjugation protein TraI | Relaxase |
| M3X89_RS28295 (M3X89_28295) | 109451..110155 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| M3X89_RS28300 (M3X89_28300) | 110319..110636 | - | 318 | WP_004118473.1 | hypothetical protein | - |
| M3X89_RS28305 (M3X89_28305) | 110671..110925 | - | 255 | WP_004152754.1 | DNA polymerase III subunit theta | - |
| M3X89_RS28310 (M3X89_28310) | 111162..111587 | - | 426 | WP_004118478.1 | antirestriction protein | - |
| M3X89_RS28315 (M3X89_28315) | 112107..112337 | - | 231 | WP_004118481.1 | hypothetical protein | - |
| M3X89_RS28320 (M3X89_28320) | 112571..114082 | - | 1512 | WP_162224963.1 | hypothetical protein | VF |
| M3X89_RS28325 (M3X89_28325) | 114484..114909 | + | 426 | WP_004182047.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| M3X89_RS28330 (M3X89_28330) | 114909..116180 | + | 1272 | WP_023157784.1 | Y-family DNA polymerase | - |
| M3X89_RS28335 (M3X89_28335) | 116259..116510 | + | 252 | WP_004182043.1 | hypothetical protein | - |
| M3X89_RS28340 (M3X89_28340) | 116755..118707 | - | 1953 | WP_000037308.1 | DUF262 domain-containing protein | - |
| M3X89_RS28345 (M3X89_28345) | 118704..119984 | - | 1281 | WP_004182042.1 | DUF262 domain-containing protein | - |
| M3X89_RS28350 (M3X89_28350) | 120494..120910 | - | 417 | WP_023157785.1 | hypothetical protein | - |
| M3X89_RS28355 (M3X89_28355) | 120952..121647 | + | 696 | Protein_136 | IS1 family transposase | - |
| M3X89_RS28360 (M3X89_28360) | 122422..123541 | - | 1120 | Protein_137 | IS3 family transposase ISSen4 | Transposase |
| M3X89_RS28365 (M3X89_28365) | 124584..125555 | - | 972 | WP_004182039.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| M3X89_RS28370 (M3X89_28370) | 125555..126721 | - | 1167 | WP_004182032.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|