MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 98382 bp
Accession: NZ_CP097560 Location: 5968758..6067139 Organism: Pseudomonas aeruginosa strain C4.2 Replicon: chromosome
Accession: NZ_CP097560 Location: 5968758..6067139 Organism: Pseudomonas aeruginosa strain C4.2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PAC42_RS28625 (PAC42_28550) | 5964330..5968529 | + | 4200 | WP_023108752.1 | two-partner secretion system exoprotein TpsA4 | - |
| PAC42_RS28635 (PAC42_28560) | 5968895..5969761 | + | 867 | WP_003120956.1 | ParA family protein | - |
| PAC42_RS28640 (PAC42_28565) | 5969763..5970500 | + | 738 | WP_016852973.1 | hypothetical protein | - |
| PAC42_RS28645 (PAC42_28570) | 5970497..5970988 | + | 492 | WP_016852972.1 | hypothetical protein | - |
| PAC42_RS28650 (PAC42_28575) | 5970985..5971647 | + | 663 | WP_023082646.1 | hypothetical protein | - |
| PAC42_RS28655 (PAC42_28580) | 5971644..5972327 | + | 684 | WP_016852970.1 | hypothetical protein | - |
| PAC42_RS28660 (PAC42_28585) | 5972327..5973028 | + | 702 | WP_016852969.1 | DUF2786 domain-containing protein | - |
| PAC42_RS28665 (PAC42_28590) | 5973025..5973732 | + | 708 | WP_016852968.1 | HNH endonuclease signature motif containing protein | - |
| PAC42_RS28670 (PAC42_28595) | 5973716..5973934 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| PAC42_RS28675 (PAC42_28600) | 5973931..5975274 | + | 1344 | WP_016852967.1 | replicative DNA helicase | - |
| PAC42_RS28680 (PAC42_28605) | 5975713..5976159 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| PAC42_RS28685 (PAC42_28610) | 5976337..5976522 | + | 186 | WP_016852966.1 | hypothetical protein | - |
| PAC42_RS28690 (PAC42_28615) | 5976512..5977039 | + | 528 | WP_016852965.1 | hypothetical protein | - |
| PAC42_RS28695 (PAC42_28620) | 5977036..5977293 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| PAC42_RS28700 (PAC42_28625) | 5977286..5977525 | + | 240 | WP_016852964.1 | hypothetical protein | - |
| PAC42_RS28705 (PAC42_28630) | 5977518..5977751 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| PAC42_RS28710 (PAC42_28635) | 5977751..5978773 | + | 1023 | WP_019416389.1 | nucleoid-associated protein YejK | - |
| PAC42_RS28715 (PAC42_28640) | 5978770..5979660 | + | 891 | WP_016851600.1 | DNA adenine methylase | - |
| PAC42_RS28720 (PAC42_28645) | 5979681..5979950 | + | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| PAC42_RS28725 (PAC42_28650) | 5979947..5981683 | + | 1737 | WP_023464346.1 | ParB family protein | - |
| PAC42_RS28730 (PAC42_28655) | 5981711..5982478 | + | 768 | WP_016851602.1 | DUF2857 domain-containing protein | - |
| PAC42_RS28735 (PAC42_28660) | 5982475..5983779 | + | 1305 | WP_023101569.1 | STY4528 family pathogenicity island replication protein | - |
| PAC42_RS28740 (PAC42_28665) | 5983785..5984804 | - | 1020 | WP_024100015.1 | hypothetical protein | - |
| PAC42_RS28745 (PAC42_28670) | 5984832..5985029 | + | 198 | WP_019396765.1 | hypothetical protein | - |
| PAC42_RS28750 (PAC42_28675) | 5985186..5985914 | + | 729 | WP_016851605.1 | TIGR03761 family integrating conjugative element protein | - |
| PAC42_RS28755 (PAC42_28680) | 5985920..5986468 | + | 549 | WP_016851606.1 | DUF3158 family protein | - |
| PAC42_RS28760 (PAC42_28685) | 5986516..5987346 | + | 831 | WP_012076855.1 | phage regulatory protein | - |
| PAC42_RS28765 (PAC42_28690) | 5987376..5987834 | + | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| PAC42_RS28770 (PAC42_28695) | 5987940..5988134 | + | 195 | WP_016851608.1 | hypothetical protein | - |
| PAC42_RS28775 (PAC42_28700) | 5988349..5988546 | + | 198 | WP_071533909.1 | CrpP family ICE-associated protein | - |
| PAC42_RS28780 (PAC42_28705) | 5988662..5990581 | + | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| PAC42_RS28785 (PAC42_28710) | 5990888..5991097 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| PAC42_RS28790 (PAC42_28715) | 5991319..5993208 | + | 1890 | WP_016851610.1 | hypothetical protein | - |
| PAC42_RS28795 (PAC42_28720) | 5993205..5995181 | + | 1977 | WP_268173976.1 | DEAD/DEAH box helicase | - |
| PAC42_RS28800 (PAC42_28725) | 5995322..5995666 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| PAC42_RS28805 (PAC42_28730) | 5995737..5996027 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| PAC42_RS28810 (PAC42_28735) | 5996024..5996323 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PAC42_RS28815 (PAC42_28740) | 5996525..5997649 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| PAC42_RS28820 (PAC42_28745) | 5997649..5999358 | + | 1710 | WP_012076860.1 | hypothetical protein | VF |
| PAC42_RS28825 (PAC42_28750) | 5999362..6000687 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| PAC42_RS28830 (PAC42_28755) | 6000677..6001210 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| PAC42_RS28835 (PAC42_28760) | 6001219..6002799 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| PAC42_RS28840 (PAC42_28765) | 6002799..6003878 | + | 1080 | WP_003099764.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PAC42_RS28845 (PAC42_28770) | 6003900..6004430 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| PAC42_RS28850 (PAC42_28775) | 6004427..6005383 | + | 957 | WP_003117051.1 | Twitching mobility protein | VF |
| PAC42_RS28855 (PAC42_28780) | 6005376..6006755 | + | 1380 | WP_003117053.1 | hypothetical protein | VF |
| PAC42_RS28860 (PAC42_28785) | 6006773..6007210 | + | 438 | WP_003117054.1 | hypothetical protein | VF |
| PAC42_RS28865 (PAC42_28790) | 6008129..6008518 | + | 390 | WP_003158173.1 | hypothetical protein | - |
| PAC42_RS28870 (PAC42_28795) | 6008593..6008766 | + | 174 | WP_003158172.1 | hypothetical protein | - |
| PAC42_RS28875 | 6008768..6008902 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| PAC42_RS28880 (PAC42_28800) | 6009227..6009706 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| PAC42_RS28885 (PAC42_28805) | 6009844..6010002 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| PAC42_RS28890 (PAC42_28810) | 6010076..6010273 | + | 198 | WP_003117057.1 | hypothetical protein | - |
| PAC42_RS28895 (PAC42_28815) | 6010758..6011465 | + | 708 | WP_003117058.1 | hypothetical protein | - |
| PAC42_RS28900 (PAC42_28820) | 6011701..6012051 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| PAC42_RS28905 (PAC42_28825) | 6012108..6012740 | + | 633 | WP_003158170.1 | DUF3275 family protein | - |
| PAC42_RS28910 (PAC42_28830) | 6012737..6013012 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| PAC42_RS28915 (PAC42_28835) | 6013082..6013444 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| PAC42_RS28920 (PAC42_28840) | 6013522..6013815 | + | 294 | WP_012077888.1 | IS3 family transposase ISHor1 | Transposase |
| PAC42_RS28925 (PAC42_28845) | 6013812..6014678 | + | 867 | WP_004352797.1 | IS3 family transposase ISAeca4 | Transposase |
| PAC42_RS28930 (PAC42_28850) | 6014766..6015020 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| PAC42_RS28935 (PAC42_28855) | 6015113..6015718 | + | 606 | WP_003158169.1 | hypothetical protein | - |
| PAC42_RS28940 (PAC42_28860) | 6015748..6017193 | + | 1446 | WP_003158168.1 | DUF6094 domain-containing protein | - |
| PAC42_RS28945 (PAC42_28865) | 6017161..6017493 | - | 333 | WP_003158167.1 | hypothetical protein | - |
| PAC42_RS28950 (PAC42_28870) | 6017486..6017916 | - | 431 | Protein_5727 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PAC42_RS28955 (PAC42_28875) | 6018021..6018704 | + | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| PAC42_RS28960 (PAC42_28880) | 6019568..6019942 | + | 375 | WP_003158163.1 | hypothetical protein | - |
| PAC42_RS28965 (PAC42_28885) | 6019967..6020551 | + | 585 | WP_044265603.1 | hypothetical protein | - |
| PAC42_RS28970 (PAC42_28890) | 6020536..6021132 | + | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| PAC42_RS28975 (PAC42_28895) | 6021684..6022076 | + | 393 | WP_003158160.1 | hypothetical protein | - |
| PAC42_RS28980 (PAC42_28900) | 6022095..6022418 | + | 324 | WP_003158159.1 | hypothetical protein | - |
| PAC42_RS28985 (PAC42_28905) | 6023245..6023517 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| PAC42_RS28990 (PAC42_28910) | 6023735..6024433 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| PAC42_RS28995 (PAC42_28915) | 6024444..6025199 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| PAC42_RS29000 (PAC42_28920) | 6025184..6025765 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| PAC42_RS29005 (PAC42_28925) | 6025762..6026262 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| PAC42_RS29010 (PAC42_28930) | 6026271..6026540 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| PAC42_RS29015 (PAC42_28935) | 6026544..6028775 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| PAC42_RS29020 (PAC42_28940) | 6028775..6029521 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PAC42_RS29025 (PAC42_28945) | 6029539..6030030 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| PAC42_RS29030 (PAC42_28950) | 6030272..6031753 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| PAC42_RS29035 (PAC42_28955) | 6031885..6032994 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| PAC42_RS29040 (PAC42_28960) | 6033040..6033306 | - | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| PAC42_RS29045 (PAC42_28965) | 6033619..6036585 | - | 2967 | WP_011005944.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| PAC42_RS29050 (PAC42_28970) | 6036589..6037149 | - | 561 | WP_014003957.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| PAC42_RS29055 (PAC42_28975) | 6037152..6037760 | - | 609 | WP_014003956.1 | hypothetical protein | - |
| PAC42_RS29060 (PAC42_28980) | 6038057..6038623 | - | 567 | WP_004574805.1 | OsmC family protein | - |
| PAC42_RS29065 (PAC42_28985) | 6038638..6039414 | - | 777 | WP_004574804.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| PAC42_RS29070 (PAC42_28990) | 6039474..6040058 | - | 585 | WP_004574803.1 | hypothetical protein | VF |
| PAC42_RS29075 (PAC42_28995) | 6040055..6040735 | - | 681 | WP_004574802.1 | cupin domain-containing protein | - |
| PAC42_RS29080 (PAC42_29000) | 6040892..6041143 | + | 252 | WP_046095042.1 | hypothetical protein | - |
| PAC42_RS29085 (PAC42_29005) | 6041237..6041575 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| PAC42_RS29090 (PAC42_29010) | 6041813..6043327 | + | 1515 | WP_038410324.1 | IS21 family transposase ISPsy40 | Transposase |
| PAC42_RS29095 (PAC42_29015) | 6043348..6044103 | + | 756 | WP_038410325.1 | IS21 family transposase ISPsy40 | Transposase |
| PAC42_RS29100 (PAC42_29020) | 6044219..6044461 | + | 243 | WP_268173979.1 | TIGR03758 family integrating conjugative element protein | - |
| PAC42_RS29105 (PAC42_29025) | 6044479..6044835 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PAC42_RS29110 (PAC42_29030) | 6044846..6045232 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| PAC42_RS29115 (PAC42_29035) | 6045229..6045888 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| PAC42_RS29120 (PAC42_29040) | 6045885..6046769 | + | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| PAC42_RS29125 (PAC42_29045) | 6046753..6048258 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| PAC42_RS29130 (PAC42_29050) | 6048236..6048679 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PAC42_RS29135 (PAC42_29055) | 6048679..6051621 | + | 2943 | WP_031299041.1 | conjugative transfer ATPase | - |
| PAC42_RS29140 (PAC42_29060) | 6051618..6051902 | + | 285 | WP_003099860.1 | hypothetical protein | - |
| PAC42_RS29145 (PAC42_29065) | 6051899..6052558 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| PAC42_RS29150 (PAC42_29070) | 6052555..6052773 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| PAC42_RS29155 (PAC42_29075) | 6054915..6055346 | + | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| PAC42_RS29160 (PAC42_29080) | 6055346..6056284 | + | 939 | WP_016851627.1 | TIGR03756 family integrating conjugative element protein | - |
| PAC42_RS29165 (PAC42_29085) | 6056302..6057684 | + | 1383 | WP_023122674.1 | integrating conjugative element protein | - |
| PAC42_RS29170 (PAC42_29090) | 6057684..6058031 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| PAC42_RS29175 (PAC42_29095) | 6058028..6059542 | + | 1515 | WP_016851630.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PAC42_RS29180 (PAC42_29100) | 6059568..6059891 | - | 324 | WP_071536355.1 | hypothetical protein | - |
| PAC42_RS29185 (PAC42_29105) | 6060010..6060282 | + | 273 | WP_003111730.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PAC42_RS29190 (PAC42_29110) | 6060286..6060639 | + | 354 | WP_003111729.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PAC42_RS29195 (PAC42_29115) | 6060666..6061580 | - | 915 | WP_003119431.1 | hypothetical protein | - |
| PAC42_RS29200 (PAC42_29120) | 6061606..6061845 | - | 240 | WP_010792230.1 | hypothetical protein | - |
| PAC42_RS29210 (PAC42_29130) | 6063528..6065447 | + | 1920 | WP_016852953.1 | MobH family relaxase | - |
| PAC42_RS29215 (PAC42_29135) | 6065444..6066724 | + | 1281 | WP_016852952.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PAC42_RS29235 (PAC42_29155) | 6067577..6070141 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| PAC42_RS29240 (PAC42_29160) | 6070297..6071025 | - | 729 | WP_019682292.1 | peptidoglycan editing factor PgeF | - |
| PAC42_RS29245 (PAC42_29165) | 6071022..6071984 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|