MGE detailed information
MGE type: Prophage MGE length: 23828 bp
Accession: NZ_CP097528 Location: 4671245..4695072 Organism: Pseudomonas putida strain KT2440 isolate pMBEC6 Replicon: chromosome
Accession: NZ_CP097528 Location: 4671245..4695072 Organism: Pseudomonas putida strain KT2440 isolate pMBEC6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8003_RS21635 (M8003_21610) | 4666251..4668104 | + | 1854 | WP_010954903.1 | NADH-quinone oxidoreductase subunit L | - |
| M8003_RS21640 (M8003_21615) | 4668145..4669677 | + | 1533 | WP_010954904.1 | NADH-quinone oxidoreductase subunit M | - |
| M8003_RS21645 (M8003_21620) | 4669685..4671154 | + | 1470 | WP_010954905.1 | NADH-quinone oxidoreductase subunit NuoN | - |
| M8003_RS21650 (M8003_21625) | 4671245..4671508 | - | 264 | WP_010954906.1 | ogr/Delta-like zinc finger family protein | - |
| M8003_RS21655 (M8003_21630) | 4671688..4672065 | + | 378 | WP_010954907.1 | helix-turn-helix domain-containing protein | - |
| M8003_RS21660 (M8003_21635) | 4672062..4672424 | - | 363 | WP_010954908.1 | hypothetical protein | - |
| M8003_RS21665 (M8003_21640) | 4672417..4672764 | - | 348 | WP_010954909.1 | head completion/stabilization protein | - |
| M8003_RS21670 (M8003_21645) | 4672776..4673024 | - | 249 | WP_003251454.1 | Transcriptional activator protein LasR | VF |
| M8003_RS21675 (M8003_21650) | 4673245..4675317 | + | 2073 | WP_010954910.1 | TonB-dependent receptor | - |
| M8003_RS21680 (M8003_21655) | 4675421..4675981 | - | 561 | WP_003251456.1 | class I chromate reductase ChrR | - |
| M8003_RS21685 (M8003_21660) | 4676138..4676356 | + | 219 | WP_010954911.1 | hypothetical protein | - |
| M8003_RS21690 (M8003_21665) | 4676340..4678589 | - | 2250 | WP_049588234.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| M8003_RS21695 (M8003_21670) | 4678717..4679475 | - | 759 | WP_010954912.1 | DNA polymerase III subunit epsilon | - |
| M8003_RS21700 (M8003_21675) | 4679526..4679972 | - | 447 | WP_003251460.1 | ribonuclease HI | - |
| M8003_RS21705 (M8003_21680) | 4679988..4680761 | - | 774 | WP_003251461.1 | methyltransferase domain-containing protein | - |
| M8003_RS21710 (M8003_21685) | 4680847..4681626 | + | 780 | WP_010954914.1 | hydroxyacylglutathione hydrolase | - |
| M8003_RS21715 (M8003_21690) | 4681727..4683157 | + | 1431 | WP_010954915.1 | Membrane-bound lytic murein transglycosylase D | VF |
| M8003_RS21720 (M8003_21695) | 4683378..4685207 | + | 1830 | WP_010954916.1 | extracellular solute-binding protein | - |
| M8003_RS21725 (M8003_21700) | 4685204..4687039 | + | 1836 | WP_010954917.1 | extracellular solute-binding protein | - |
| M8003_RS21730 (M8003_21705) | 4687041..4688114 | + | 1074 | WP_010954918.1 | microcin C ABC transporter permease YejB | - |
| M8003_RS21735 (M8003_21710) | 4688116..4689135 | + | 1020 | WP_010954919.1 | ABC transporter permease | - |
| M8003_RS21740 (M8003_21715) | 4689137..4690741 | + | 1605 | WP_010954920.1 | putative ABC transporter ATP-binding protein YejF | VF |
| M8003_RS21745 (M8003_21720) | 4690889..4691356 | + | 468 | WP_049588231.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| M8003_RS21750 (M8003_21725) | 4691353..4691928 | + | 576 | WP_010954922.1 | PIN domain-containing protein | Toxin Detail |
| M8003_RS21755 (M8003_21730) | 4692142..4695072 | + | 2931 | WP_049588229.1 | aminotransferase | - |
| M8003_RS21760 (M8003_21735) | 4695076..4696299 | - | 1224 | WP_010954925.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| M8003_RS21765 (M8003_21740) | 4696390..4697295 | + | 906 | WP_010954926.1 | LysR family transcriptional regulator | - |
| M8003_RS21770 (M8003_21745) | 4697357..4698052 | - | 696 | WP_010954927.1 | response regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Pseudomonas putida KT2440 | Prophage | TA313, TA20571 | NC_002947 | 4671229..4695056 | 0 |