MGE detailed information
MGE type: Prophage MGE length: 23828 bp
Accession: NZ_CP097527 Location: 4671242..4695069 Organism: Pseudomonas putida strain KT2440 isolate pnCas9-BEC6-C Replicon: chromosome
Accession: NZ_CP097527 Location: 4671242..4695069 Organism: Pseudomonas putida strain KT2440 isolate pnCas9-BEC6-C Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8001_RS21635 (M8001_21610) | 4666248..4668101 | + | 1854 | WP_010954903.1 | NADH-quinone oxidoreductase subunit L | - |
| M8001_RS21640 (M8001_21615) | 4668142..4669674 | + | 1533 | WP_010954904.1 | NADH-quinone oxidoreductase subunit M | - |
| M8001_RS21645 (M8001_21620) | 4669682..4671151 | + | 1470 | WP_010954905.1 | NADH-quinone oxidoreductase subunit NuoN | - |
| M8001_RS21650 (M8001_21625) | 4671242..4671505 | - | 264 | WP_010954906.1 | ogr/Delta-like zinc finger family protein | - |
| M8001_RS21655 (M8001_21630) | 4671685..4672062 | + | 378 | WP_010954907.1 | helix-turn-helix domain-containing protein | - |
| M8001_RS21660 (M8001_21635) | 4672059..4672421 | - | 363 | WP_010954908.1 | hypothetical protein | - |
| M8001_RS21665 (M8001_21640) | 4672414..4672761 | - | 348 | WP_010954909.1 | head completion/stabilization protein | - |
| M8001_RS21670 (M8001_21645) | 4672773..4673021 | - | 249 | WP_003251454.1 | Transcriptional activator protein LasR | VF |
| M8001_RS21675 (M8001_21650) | 4673242..4675314 | + | 2073 | WP_010954910.1 | TonB-dependent receptor | - |
| M8001_RS21680 (M8001_21655) | 4675418..4675978 | - | 561 | WP_003251456.1 | class I chromate reductase ChrR | - |
| M8001_RS21685 (M8001_21660) | 4676135..4676353 | + | 219 | WP_010954911.1 | hypothetical protein | - |
| M8001_RS21690 (M8001_21665) | 4676337..4678586 | - | 2250 | WP_049588234.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| M8001_RS21695 (M8001_21670) | 4678714..4679472 | - | 759 | WP_010954912.1 | DNA polymerase III subunit epsilon | - |
| M8001_RS21700 (M8001_21675) | 4679523..4679969 | - | 447 | WP_003251460.1 | ribonuclease HI | - |
| M8001_RS21705 (M8001_21680) | 4679985..4680758 | - | 774 | WP_003251461.1 | methyltransferase domain-containing protein | - |
| M8001_RS21710 (M8001_21685) | 4680844..4681623 | + | 780 | WP_010954914.1 | hydroxyacylglutathione hydrolase | - |
| M8001_RS21715 (M8001_21690) | 4681724..4683154 | + | 1431 | WP_010954915.1 | Membrane-bound lytic murein transglycosylase D | VF |
| M8001_RS21720 (M8001_21695) | 4683375..4685204 | + | 1830 | WP_010954916.1 | extracellular solute-binding protein | - |
| M8001_RS21725 (M8001_21700) | 4685201..4687036 | + | 1836 | WP_010954917.1 | extracellular solute-binding protein | - |
| M8001_RS21730 (M8001_21705) | 4687038..4688111 | + | 1074 | WP_010954918.1 | microcin C ABC transporter permease YejB | - |
| M8001_RS21735 (M8001_21710) | 4688113..4689132 | + | 1020 | WP_010954919.1 | ABC transporter permease | - |
| M8001_RS21740 (M8001_21715) | 4689134..4690738 | + | 1605 | WP_010954920.1 | putative ABC transporter ATP-binding protein YejF | VF |
| M8001_RS21745 (M8001_21720) | 4690886..4691353 | + | 468 | WP_049588231.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| M8001_RS21750 (M8001_21725) | 4691350..4691925 | + | 576 | WP_010954922.1 | PIN domain-containing protein | Toxin Detail |
| M8001_RS21755 (M8001_21730) | 4692139..4695069 | + | 2931 | WP_049588229.1 | aminotransferase | - |
| M8001_RS21760 (M8001_21735) | 4695073..4696296 | - | 1224 | WP_010954925.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| M8001_RS21765 (M8001_21740) | 4696387..4697292 | + | 906 | WP_010954926.1 | LysR family transcriptional regulator | - |
| M8001_RS21770 (M8001_21745) | 4697354..4698049 | - | 696 | WP_010954927.1 | response regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Pseudomonas putida KT2440 | Prophage | TA313, TA20571 | NC_002947 | 4671229..4695056 | 0 |