MGE detailed information
MGE type: Conjugative plasmid MGE length: 87915 bp
Accession: NZ_CP097427 Location: 1..87915 Organism: Escherichia coli strain C289 Replicon: plasmid unnamed1
Accession: NZ_CP097427 Location: 1..87915 Organism: Escherichia coli strain C289 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8Y67_RS22970 (1) | 1..825 | + | 825 | WP_001545755.1 | conjugal transfer protein TraE | - |
| M8Y67_RS22975 (911) | 911..2113 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| M8Y67_RS22980 (2173) | 2173..2757 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| M8Y67_RS22985 (3152) | 3152..3610 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| M8Y67_RS22990 (3607) | 3607..4425 | + | 819 | WP_000646095.1 | hypothetical protein | VF |
| M8Y67_RS22995 (4422) | 4422..5570 | + | 1149 | WP_001024974.1 | putative protein YggR | VF |
| M8Y67_RS23000 (5567) | 5567..5857 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| M8Y67_RS23005 (5872) | 5872..6423 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| M8Y67_RS23010 (6513) | 6513..10280 | + | 3768 | WP_001141537.1 | DUF5710 domain-containing protein | - |
| M8Y67_RS23015 (10298) | 10298..10645 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| M8Y67_RS23020 (10642) | 10642..11334 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| M8Y67_RS23025 (11345) | 11345..12328 | + | 984 | WP_001191879.1 | hypothetical protein | VF |
| M8Y67_RS23030 (12331) | 12331..13620 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| M8Y67_RS23035 (13620) | 13620..14324 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| M8Y67_RS23040 (14324) | 14324..14851 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| M8Y67_RS23045 (14902) | 14902..15306 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| M8Y67_RS23050 (15370) | 15370..15558 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| M8Y67_RS23055 (15542) | 15542..16342 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| M8Y67_RS23060 (16432) | 16432..19476 | + | 3045 | WP_052980399.1 | IncI1-type conjugal transfer protein TraU | - |
| M8Y67_RS23065 (19476) | 19476..20090 | + | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| M8Y67_RS23070 (20057) | 20057..21259 | + | 1203 | WP_052980400.1 | IncI1-type conjugal transfer protein TraW | - |
| M8Y67_RS23075 (21288) | 21288..21872 | + | 585 | WP_001037985.1 | IncI1-type conjugal transfer protein TraX | - |
| M8Y67_RS23080 (21969) | 21969..24137 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| M8Y67_RS23085 (24208) | 24208..24870 | + | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M8Y67_RS23090 (24968) | 24968..25177 | + | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| M8Y67_RS23095 (25386) | 25386..25562 | + | 177 | WP_001054901.1 | hypothetical protein | - |
| M8Y67_RS24430 (25627) | 25627..25722 | - | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| M8Y67_RS23105 (26221) | 26221..26472 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| M8Y67_RS23110 (26544) | 26544..26696 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - (26751) | 26751..26808 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (26751) | 26751..26808 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (26751) | 26751..26808 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (26751) | 26751..26808 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| M8Y67_RS23115 (26972) | 26972..28180 | + | 1209 | WP_052980401.1 | IncI1-type conjugal transfer protein TrbA | - |
| M8Y67_RS23120 (28199) | 28199..29269 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| M8Y67_RS23125 (29262) | 29262..31553 | + | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| M8Y67_RS23130 (31590) | 31590..34289 | - | 2700 | WP_001405892.1 | hypothetical protein | Relaxase |
| M8Y67_RS23135 (34300) | 34300..34632 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| M8Y67_RS23140 (34866) | 34866..35201 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| M8Y67_RS23145 (35287) | 35287..36135 | - | 849 | WP_001077030.1 | DUF4942 domain-containing protein | - |
| M8Y67_RS23150 (36716) | 36716..36967 | + | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| M8Y67_RS23155 (36998) | 36998..37243 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| M8Y67_RS23160 (37243) | 37243..38157 | - | 915 | WP_000038334.1 | ISNCY family transposase ISRor2 | VF |
| M8Y67_RS23165 (38222) | 38222..38488 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| M8Y67_RS23170 (38581) | 38581..39015 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| M8Y67_RS23175 (39744) | 39744..40244 | - | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| M8Y67_RS23180 (40707) | 40707..41303 | - | 597 | WP_000978005.1 | hypothetical protein | - |
| M8Y67_RS23185 (41300) | 41300..42019 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| M8Y67_RS23190 (42016) | 42016..42450 | - | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| M8Y67_RS23195 (42505) | 42505..44463 | - | 1959 | WP_117102583.1 | ParB/RepB/Spo0J family partition protein | - |
| M8Y67_RS23200 (44522) | 44522..44755 | - | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| M8Y67_RS23205 (44813) | 44813..45340 | - | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| M8Y67_RS23210 (46110) | 46110..46301 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| M8Y67_RS23215 (46298) | 46298..46720 | - | 423 | WP_000271741.1 | DUF1380 family protein | - |
| M8Y67_RS23220 (46767) | 46767..47192 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| M8Y67_RS23225 (47609) | 47609..48379 | - | 771 | WP_180350029.1 | hypothetical protein | - |
| M8Y67_RS23230 (48430) | 48430..48896 | - | 467 | Protein_52 | DUF1380 family protein | - |
| M8Y67_RS23235 (48877) | 48877..49098 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| M8Y67_RS23240 (49099) | 49099..49782 | - | 684 | WP_000086144.1 | DNA methylase | - |
| M8Y67_RS23245 (49858) | 49858..50163 | - | 306 | WP_015058890.1 | hypothetical protein | - |
| M8Y67_RS23250 (50167) | 50167..51069 | - | 903 | WP_117102582.1 | DUF1281 domain-containing protein | - |
| M8Y67_RS23255 (51487) | 51487..51735 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| M8Y67_RS23260 (51732) | 51732..52169 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| M8Y67_RS23265 (52169) | 52169..53443 | + | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| M8Y67_RS23270 (53445) | 53445..53861 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| M8Y67_RS23275 (53854) | 53854..54834 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| M8Y67_RS23280 (55248) | 55248..55556 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| M8Y67_RS23285 (55643) | 55643..56287 | - | 645 | WP_001144036.1 | ParA family protein | - |
| M8Y67_RS23290 (56467) | 56467..57246 | - | 780 | WP_001164198.1 | site-specific integrase | - |
| M8Y67_RS23295 (57248) | 57248..57628 | - | 381 | WP_000465035.1 | hypothetical protein | - |
| M8Y67_RS23300 (58161) | 58161..58415 | + | 255 | WP_000343106.1 | hypothetical protein | - |
| M8Y67_RS23305 (58415) | 58415..59005 | + | 591 | WP_001401589.1 | hypothetical protein | - |
| M8Y67_RS23310 (59218) | 59218..60270 | + | 1053 | WP_000655519.1 | hypothetical protein | - |
| M8Y67_RS23315 (60446) | 60446..61048 | + | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| M8Y67_RS23320 (61104) | 61104..61598 | + | 495 | WP_015058884.1 | hypothetical protein | - |
| M8Y67_RS23325 (61777) | 61777..62088 | - | 312 | Protein_71 | aminoglycoside phosphotransferase family protein | - |
| M8Y67_RS23330 (62146) | 62146..62385 | - | 240 | Protein_72 | transposase | - |
| M8Y67_RS23335 (62439) | 62439..63143 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| M8Y67_RS23340 (63277) | 63277..64137 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| M8Y67_RS23345 (64214) | 64214..65074 | + | 861 | WP_000557452.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| M8Y67_RS23350 (65087) | 65087..65488 | + | 402 | Protein_76 | AAA family ATPase | - |
| M8Y67_RS23355 (65528) | 65528..66232 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| M8Y67_RS23360 (66295) | 66295..66498 | + | 204 | Protein_78 | Tn3 family transposase TnpA_Tn3 | Transposase |
| M8Y67_RS23365 (66531) | 66531..66749 | + | 219 | Protein_79 | IS1 family transposase | - |
| M8Y67_RS23370 (66789) | 66789..66992 | - | 204 | Protein_80 | hypothetical protein | - |
| M8Y67_RS23375 (67098) | 67098..67373 | - | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M8Y67_RS23380 (67373) | 67373..67657 | - | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| M8Y67_RS23385 (68561) | 68561..69592 | - | 1032 | WP_052980407.1 | plasmid replication initiator RepA | - |
| M8Y67_RS23390 (70550) | 70550..70828 | + | 279 | WP_219065241.1 | ash family protein | - |
| M8Y67_RS23395 (70746) | 70746..71033 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| M8Y67_RS23400 (71475) | 71475..72008 | + | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| M8Y67_RS23405 (72262) | 72262..72945 | + | 684 | WP_000213863.1 | hypothetical protein | - |
| M8Y67_RS23410 (73117) | 73117..73371 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| M8Y67_RS23415 (74123) | 74123..75190 | + | 1068 | WP_001442752.1 | hypothetical protein | VF |
| M8Y67_RS23420 (75190) | 75190..75627 | + | 438 | WP_000539811.1 | hypothetical protein | VF |
| M8Y67_RS23425 (75641) | 75641..77323 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| M8Y67_RS23430 (77316) | 77316..78611 | + | 1296 | WP_052980408.1 | type 4b pilus protein PilO2 | - |
| M8Y67_RS23435 (78598) | 78598..79050 | + | 453 | WP_001247333.1 | hypothetical protein | VF |
| M8Y67_RS23440 (79061) | 79061..80614 | + | 1554 | WP_001697923.1 | hypothetical protein | VF |
| M8Y67_RS23445 (80627) | 80627..81712 | + | 1086 | WP_001208802.1 | hypothetical protein | VF |
| M8Y67_RS23450 (81729) | 81729..82343 | + | 615 | WP_052980409.1 | hypothetical protein | VF |
| M8Y67_RS23455 (82353) | 82353..82913 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| M8Y67_RS23460 (82898) | 82898..83554 | + | 657 | WP_001401940.1 | hypothetical protein | VF |
| M8Y67_RS23465 (83554) | 83554..84846 | + | 1293 | WP_060615641.1 | hypothetical protein | VF |
| M8Y67_RS23470 (84839) | 84839..85090 | - | 252 | WP_114026219.1 | hypothetical protein | - |
| M8Y67_RS23475 (86259) | 86259..86612 | - | 354 | WP_001393368.1 | hypothetical protein | - |
| M8Y67_RS23480 (86611) | 86611..87765 | + | 1155 | WP_001139957.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|