MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 79003 bp
Accession: NZ_CP097269 Location: 3082494..3161496 Organism: Acidovorax sp. GBBC 1281 Replicon: chromosome
Accession: NZ_CP097269 Location: 3082494..3161496 Organism: Acidovorax sp. GBBC 1281 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5C96_RS14305 (M5C96_14320) | 3077537..3077893 | - | 357 | WP_272563834.1 | integration host factor subunit alpha | - |
| M5C96_RS14310 (M5C96_14325) | 3077893..3080334 | - | 2442 | WP_272563835.1 | phenylalanine--tRNA ligase subunit beta | - |
| M5C96_RS14315 (M5C96_14330) | 3080409..3081461 | - | 1053 | WP_272563836.1 | phenylalanine--tRNA ligase subunit alpha | - |
| M5C96_RS14320 (M5C96_14335) | 3081573..3081935 | - | 363 | WP_092745027.1 | 50S ribosomal protein L20 | - |
| M5C96_RS14325 (M5C96_14340) | 3081960..3082163 | - | 204 | WP_092745026.1 | 50S ribosomal protein L35 | - |
| M5C96_RS14330 (M5C96_14345) | 3082352..3082876 | - | 525 | WP_272552311.1 | translation initiation factor IF-3 | - |
| M5C96_RS14335 (M5C96_14350) | 3083029..3084948 | - | 1920 | WP_272563837.1 | threonine--tRNA ligase | - |
| M5C96_RS14340 (M5C96_14355) | 3085222..3086541 | - | 1320 | WP_272563838.1 | Isocitrate lyase | VF |
| M5C96_RS14345 (M5C96_14360) | 3086790..3087218 | - | 429 | WP_272563839.1 | gamma-glutamylcyclotransferase family protein | - |
| M5C96_RS14350 (M5C96_14365) | 3087269..3088249 | + | 981 | WP_272563840.1 | DMT family transporter | - |
| M5C96_RS14355 (M5C96_14370) | 3088271..3088762 | - | 492 | WP_272563841.1 | Lrp/AsnC family transcriptional regulator | - |
| M5C96_RS14360 (M5C96_14375) | 3088856..3089779 | + | 924 | WP_272563842.1 | drug/metabolite exporter YedA | - |
| M5C96_RS14365 (M5C96_14380) | 3090002..3090310 | + | 309 | WP_272552302.1 | SWIB/MDM2 domain-containing protein | - |
| M5C96_RS14370 (M5C96_14385) | 3090524..3090796 | + | 273 | WP_272552300.1 | (2Fe-2S)-binding protein | - |
| M5C96_RS14375 (M5C96_14390) | 3090894..3091595 | + | 702 | WP_272563843.1 | energy transducer TonB | - |
| M5C96_RS14380 (M5C96_14395) | 3091611..3092327 | + | 717 | WP_092745016.1 | MotA/TolQ/ExbB proton channel family protein | - |
| M5C96_RS14385 (M5C96_14400) | 3092333..3092740 | + | 408 | WP_272563844.1 | biopolymer transporter ExbD | - |
| M5C96_RS14390 (M5C96_14405) | 3092831..3093049 | + | 219 | WP_272563845.1 | hemin uptake protein HemP | - |
| M5C96_RS14395 (M5C96_14410) | 3093259..3093666 | - | 408 | WP_272552295.1 | heme-binding protein | - |
| M5C96_RS14400 (M5C96_14415) | 3093889..3094581 | + | 693 | WP_272563846.1 | Bax inhibitor-1/YccA family protein | - |
| M5C96_RS14405 (M5C96_14420) | 3094738..3095118 | + | 381 | WP_272563847.1 | hypothetical protein | - |
| M5C96_RS14410 (M5C96_14425) | 3095153..3096592 | - | 1440 | WP_272563848.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| M5C96_RS14415 (M5C96_14430) | 3096637..3096951 | - | 315 | WP_272563849.1 | hypothetical protein | - |
| M5C96_RS14420 (M5C96_14435) | 3097064..3097540 | - | 477 | WP_272563850.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| M5C96_RS14425 (M5C96_14440) | 3097645..3101406 | + | 3762 | WP_272563851.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| M5C96_RS14430 (M5C96_14445) | 3101557..3102690 | - | 1134 | WP_272563852.1 | DUF2325 domain-containing protein | - |
| M5C96_RS14435 (M5C96_14450) | 3102769..3105534 | - | 2766 | WP_272563853.1 | Protein ClpV1 | VF |
| M5C96_RS14440 (M5C96_14455) | 3105572..3106702 | - | 1131 | WP_272563854.1 | hypothetical protein | VF |
| M5C96_RS14445 (M5C96_14460) | 3106699..3108573 | - | 1875 | WP_272563855.1 | hypothetical protein | VF |
| M5C96_RS14450 (M5C96_14465) | 3108643..3109167 | - | 525 | WP_272563856.1 | hypothetical protein | VF |
| M5C96_RS14455 (M5C96_14470) | 3109176..3109970 | - | 795 | WP_272563857.1 | hypothetical protein | VF |
| M5C96_RS14460 (M5C96_14475) | 3110166..3111662 | - | 1497 | WP_272563858.1 | hypothetical protein | VF |
| M5C96_RS14465 (M5C96_14480) | 3111681..3112220 | - | 540 | WP_272563859.1 | hypothetical protein | VF |
| M5C96_RS14470 (M5C96_14485) | 3112534..3113541 | - | 1008 | WP_272563860.1 | hypothetical protein | VF |
| M5C96_RS14475 (M5C96_14490) | 3113616..3114335 | - | 720 | WP_272563861.1 | type VI secretion system-associated protein TagF | - |
| M5C96_RS14480 (M5C96_14495) | 3114317..3117943 | - | 3627 | WP_272563862.1 | hypothetical protein | VF |
| M5C96_RS14485 (M5C96_14500) | 3117946..3119286 | - | 1341 | WP_272563863.1 | hypothetical protein | VF |
| M5C96_RS14490 (M5C96_14505) | 3119295..3120629 | - | 1335 | WP_272563864.1 | hypothetical protein | VF |
| M5C96_RS14495 (M5C96_14510) | 3120635..3121204 | - | 570 | WP_272563865.1 | hypothetical protein | VF |
| M5C96_RS14500 (M5C96_14515) | 3121234..3122022 | - | 789 | WP_272563866.1 | Protein phosphatase PrpC | VF |
| M5C96_RS14505 (M5C96_14520) | 3122019..3124202 | - | 2184 | WP_272563867.1 | type VI secretion system-associated FHA domain protein TagH | - |
| M5C96_RS14510 (M5C96_14525) | 3124230..3124712 | - | 483 | WP_272563868.1 | TssQ family T6SS-associated lipoprotein | - |
| M5C96_RS14515 (M5C96_14530) | 3124714..3125532 | - | 819 | WP_272563869.1 | PEGA domain-containing protein | - |
| M5C96_RS14520 (M5C96_14535) | 3125529..3127496 | - | 1968 | WP_272563870.1 | protein kinase | - |
| M5C96_RS14525 (M5C96_14540) | 3128127..3128609 | + | 483 | WP_272563871.1 | Protein hcp1 | VF |
| M5C96_RS14530 (M5C96_14545) | 3128864..3129766 | - | 903 | Protein_2866 | IS5 family transposase ISAte1 | Transposase |
| M5C96_RS14535 (M5C96_14550) | 3129782..3130876 | + | 1095 | WP_272563777.1 | IS630 family transposase ISRso5 | Transposase |
| M5C96_RS14540 (M5C96_14555) | 3130873..3131724 | + | 852 | Protein_2868 | IS5 family transposase ISAte1 | Transposase |
| M5C96_RS14545 (M5C96_14560) | 3131954..3132559 | - | 606 | WP_272563872.1 | hypothetical protein | - |
| M5C96_RS14550 (M5C96_14565) | 3132556..3132948 | - | 393 | WP_272563873.1 | hypothetical protein | - |
| M5C96_RS14555 (M5C96_14570) | 3133119..3135107 | - | 1989 | WP_272563874.1 | hypothetical protein | - |
| M5C96_RS14560 (M5C96_14575) | 3135104..3135721 | - | 618 | WP_272563875.1 | hypothetical protein | - |
| M5C96_RS14565 (M5C96_14580) | 3135734..3136339 | - | 606 | WP_272563876.1 | STY4526/YPO1902 family pathogenicity island replication protein | - |
| M5C96_RS14570 (M5C96_14585) | 3136343..3136588 | - | 246 | WP_272563877.1 | hypothetical protein | - |
| M5C96_RS14575 (M5C96_14590) | 3136588..3137040 | - | 453 | WP_272563878.1 | hypothetical protein | - |
| M5C96_RS14580 (M5C96_14595) | 3137117..3138925 | - | 1809 | WP_272563879.1 | hypothetical protein | - |
| M5C96_RS14585 (M5C96_14600) | 3138947..3139897 | - | 951 | WP_272563880.1 | ParA family protein | - |
| M5C96_RS14590 (M5C96_14605) | 3140128..3140508 | + | 381 | WP_272563881.1 | helix-turn-helix domain-containing protein | - |
| M5C96_RS14595 (M5C96_14610) | 3140569..3140724 | - | 156 | WP_272563882.1 | hypothetical protein | - |
| M5C96_RS14600 | 3140721..3140855 | - | 135 | WP_272563883.1 | hypothetical protein | - |
| M5C96_RS14605 (M5C96_14615) | 3140842..3141015 | - | 174 | WP_272563884.1 | hypothetical protein | - |
| M5C96_RS14610 (M5C96_14620) | 3141035..3141427 | - | 393 | WP_272563885.1 | hypothetical protein | - |
| M5C96_RS14615 (M5C96_14625) | 3141439..3141870 | - | 432 | WP_272563886.1 | hypothetical protein | - |
| M5C96_RS14620 (M5C96_14630) | 3141876..3142277 | - | 402 | WP_272563887.1 | hypothetical protein | - |
| M5C96_RS14625 (M5C96_14635) | 3142274..3142696 | - | 423 | WP_272569723.1 | glycoside hydrolase family 104 protein | - |
| M5C96_RS14630 (M5C96_14640) | 3142954..3143241 | - | 288 | WP_272563888.1 | hypothetical protein | - |
| M5C96_RS14635 (M5C96_14645) | 3143284..3143874 | - | 591 | WP_272563889.1 | hypothetical protein | - |
| M5C96_RS14640 (M5C96_14650) | 3143871..3144506 | - | 636 | WP_272563890.1 | hypothetical protein | - |
| M5C96_RS14645 (M5C96_14655) | 3144496..3144900 | - | 405 | WP_272563891.1 | hypothetical protein | - |
| M5C96_RS14650 (M5C96_14660) | 3144879..3145136 | - | 258 | WP_272563892.1 | hypothetical protein | - |
| M5C96_RS14655 (M5C96_14665) | 3145140..3145424 | - | 285 | WP_272563893.1 | hypothetical protein | - |
| M5C96_RS14660 (M5C96_14670) | 3145427..3146248 | - | 822 | WP_272563894.1 | major capsid protein P2 | - |
| M5C96_RS14665 (M5C96_14675) | 3146279..3146434 | - | 156 | WP_272563895.1 | hypothetical protein | - |
| M5C96_RS14670 (M5C96_14680) | 3146542..3147180 | - | 639 | WP_272563896.1 | AAA family ATPase | - |
| M5C96_RS14675 (M5C96_14685) | 3147191..3147622 | - | 432 | WP_272563897.1 | hypothetical protein | - |
| M5C96_RS14680 (M5C96_14690) | 3147622..3147912 | - | 291 | WP_272563898.1 | hypothetical protein | - |
| M5C96_RS14685 (M5C96_14695) | 3147916..3148092 | - | 177 | WP_272563899.1 | hypothetical protein | - |
| M5C96_RS14690 (M5C96_14700) | 3148092..3150113 | - | 2022 | WP_272563900.1 | replication endonuclease | - |
| M5C96_RS14695 (M5C96_14705) | 3150110..3150352 | - | 243 | WP_272563901.1 | hypothetical protein | - |
| M5C96_RS14700 (M5C96_14710) | 3150349..3150540 | - | 192 | WP_272563902.1 | hypothetical protein | - |
| M5C96_RS14705 (M5C96_14715) | 3150533..3150760 | - | 228 | WP_272563903.1 | hypothetical protein | - |
| M5C96_RS14710 (M5C96_14720) | 3150850..3151206 | + | 357 | WP_272563904.1 | hypothetical protein | - |
| M5C96_RS14715 (M5C96_14725) | 3151436..3151864 | + | 429 | WP_272563905.1 | DUF3693 domain-containing protein | - |
| M5C96_RS14720 (M5C96_14730) | 3152046..3154649 | - | 2604 | WP_272563906.1 | MobH family relaxase | - |
| M5C96_RS14725 (M5C96_14735) | 3154646..3155233 | - | 588 | WP_272563907.1 | hypothetical protein | - |
| M5C96_RS14730 (M5C96_14740) | 3155362..3155781 | + | 420 | WP_272563908.1 | XRE family transcriptional regulator | - |
| M5C96_RS14735 (M5C96_14745) | 3155819..3156085 | + | 267 | WP_272563909.1 | hypothetical protein | - |
| M5C96_RS14740 (M5C96_14750) | 3156151..3156471 | + | 321 | WP_272563910.1 | hypothetical protein | - |
| M5C96_RS14745 (M5C96_14755) | 3156477..3156767 | + | 291 | WP_272563911.1 | hypothetical protein | - |
| M5C96_RS14750 (M5C96_14760) | 3156859..3157944 | - | 1086 | WP_272569564.1 | IS5 family transposase ISAzo41 | Transposase |
| M5C96_RS14755 (M5C96_14765) | 3158134..3158376 | + | 243 | WP_272563912.1 | hypothetical protein | Antitoxin Detail |
| M5C96_RS14760 (M5C96_14770) | 3158376..3158720 | + | 345 | WP_272563913.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| M5C96_RS14765 (M5C96_14775) | 3159054..3159155 | + | 102 | Protein_2913 | IS5/IS1182 family transposase | - |
| M5C96_RS14770 (M5C96_14780) | 3159153..3160247 | - | 1095 | WP_272563777.1 | IS630 family transposase ISRso5 | Transposase |
| M5C96_RS14775 (M5C96_14785) | 3160263..3161165 | + | 903 | Protein_2915 | IS5 family transposase ISAte1 | Transposase |
| M5C96_RS14780 (M5C96_14790) | 3161184..3161387 | - | 204 | WP_272563914.1 | hypothetical protein | - |
| M5C96_RS14785 (M5C96_14795) | 3161429..3162379 | - | 951 | WP_272563915.1 | IS5 family transposase | - |
| M5C96_RS14790 (M5C96_14805) | 3163037..3163732 | - | 696 | WP_272563916.1 | ABC transporter ATP-binding protein | - |
| M5C96_RS14795 (M5C96_14810) | 3163736..3164530 | - | 795 | WP_272563917.1 | ABC transporter ATP-binding protein | - |
| M5C96_RS14800 (M5C96_14815) | 3164527..3165837 | - | 1311 | WP_272563918.1 | branched-chain amino acid ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|