MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 97695 bp
Accession: NZ_CP097252 Location: 4548589..4646283 Organism: Mesorhizobium opportunistum strain WSM1558 Replicon: chromosome
Accession: NZ_CP097252 Location: 4548589..4646283 Organism: Mesorhizobium opportunistum strain WSM1558 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5D98_RS21915 (M5D98_21915) | 4544311..4545195 | + | 885 | WP_023769056.1 | LysR family transcriptional regulator | - |
| M5D98_RS21920 (M5D98_21920) | 4545355..4545768 | + | 414 | WP_023769057.1 | ester cyclase | - |
| M5D98_RS21925 (M5D98_21925) | 4546127..4546294 | + | 168 | WP_224685769.1 | hypothetical protein | - |
| M5D98_RS21930 (M5D98_21930) | 4546429..4546869 | + | 441 | WP_224685768.1 | hypothetical protein | - |
| M5D98_RS21935 (M5D98_21935) | 4547474..4547800 | + | 327 | WP_023731557.1 | DUF736 domain-containing protein | - |
| M5D98_RS21940 (M5D98_21940) | 4547979..4548239 | + | 261 | WP_224685767.1 | DUF2285 domain-containing protein | - |
| M5D98_RS21945 (M5D98_21945) | 4548373..4548621 | + | 249 | WP_224685766.1 | DUF6499 domain-containing protein | - |
| M5D98_RS21950 (M5D98_21950) | 4548593..4549138 | + | 546 | WP_224685765.1 | DUF2285 domain-containing protein | - |
| M5D98_RS21955 (M5D98_21955) | 4549279..4549560 | + | 282 | WP_008877975.1 | helix-turn-helix domain-containing protein | - |
| M5D98_RS21960 (M5D98_21960) | 4549578..4550738 | + | 1161 | WP_224685764.1 | replication initiator protein A | - |
| M5D98_RS21965 (M5D98_21965) | 4550735..4551223 | + | 489 | WP_224685763.1 | DUF2840 domain-containing protein | - |
| M5D98_RS21970 (M5D98_21970) | 4551220..4551765 | + | 546 | WP_224685762.1 | S26 family signal peptidase | - |
| M5D98_RS21975 (M5D98_21975) | 4551836..4552171 | + | 336 | WP_140562169.1 | DUF736 domain-containing protein | - |
| M5D98_RS21980 (M5D98_21980) | 4552175..4552948 | + | 774 | WP_224685761.1 | lytic transglycosylase domain-containing protein | - |
| M5D98_RS21985 (M5D98_21985) | 4553192..4554931 | + | 1740 | WP_224685760.1 | VirD2 family relaxase/mobilization nuclease | - |
| M5D98_RS21990 (M5D98_21990) | 4554959..4556941 | + | 1983 | WP_224685759.1 | Conjugal transfer protein TraG | VF |
| M5D98_RS21995 (M5D98_21995) | 4556949..4557404 | + | 456 | WP_224685758.1 | ribbon-helix-helix protein, CopG family | - |
| M5D98_RS22000 (M5D98_22000) | 4557763..4558137 | + | 375 | WP_224685757.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| M5D98_RS22005 (M5D98_22005) | 4558134..4558451 | + | 318 | WP_023707464.1 | helix-turn-helix transcriptional regulator | - |
| M5D98_RS22010 (M5D98_22010) | 4558667..4559683 | + | 1017 | WP_224685756.1 | hypothetical protein | VF |
| M5D98_RS22015 (M5D98_22015) | 4559719..4560012 | + | 294 | WP_246678489.1 | TrbC/VirB2 family protein | - |
| M5D98_RS22020 (M5D98_22020) | 4560042..4560308 | + | 267 | WP_162256686.1 | VirB3 family type IV secretion system protein | - |
| M5D98_RS22025 (M5D98_22025) | 4560321..4562774 | + | 2454 | WP_224685755.1 | conjugal transfer protein TrbE | - |
| M5D98_RS22030 (M5D98_22030) | 4562771..4563529 | + | 759 | WP_224685754.1 | P-type conjugative transfer protein TrbJ | - |
| M5D98_RS22035 (M5D98_22035) | 4563540..4563935 | + | 396 | WP_224685753.1 | putative entry exclusion protein TrbK-alt | - |
| M5D98_RS22040 (M5D98_22040) | 4563937..4565298 | + | 1362 | WP_224685752.1 | P-type conjugative transfer protein TrbL | - |
| M5D98_RS22045 (M5D98_22045) | 4565301..4565984 | + | 684 | WP_224685751.1 | conjugal transfer protein TrbF | - |
| M5D98_RS22050 (M5D98_22050) | 4565981..4567120 | + | 1140 | WP_224685750.1 | P-type conjugative transfer protein TrbG | - |
| M5D98_RS22055 (M5D98_22055) | 4567189..4568364 | + | 1176 | WP_224685749.1 | hypothetical protein | VF |
| M5D98_RS22060 (M5D98_22060) | 4568367..4568606 | + | 240 | WP_224685748.1 | DUF2274 domain-containing protein | - |
| M5D98_RS22065 (M5D98_22065) | 4568629..4569588 | - | 960 | WP_224685747.1 | LysR family transcriptional regulator | - |
| M5D98_RS22070 (M5D98_22070) | 4569600..4570592 | - | 993 | WP_224685746.1 | class I SAM-dependent methyltransferase | - |
| M5D98_RS22075 (M5D98_22075) | 4570870..4571757 | + | 888 | WP_224685745.1 | HTH-type transcriptional activator RhaS | VF |
| M5D98_RS22080 (M5D98_22080) | 4571865..4573070 | + | 1206 | WP_224685744.1 | MFS transporter | - |
| M5D98_RS22085 (M5D98_22085) | 4573072..4574472 | + | 1401 | WP_224685743.1 | hypothetical protein | - |
| M5D98_RS22090 (M5D98_22090) | 4574657..4575610 | + | 954 | WP_224685742.1 | DUF1403 family protein | - |
| M5D98_RS22095 (M5D98_22095) | 4575613..4576335 | + | 723 | WP_224685741.1 | SMC-Scp complex subunit ScpB | - |
| M5D98_RS22100 (M5D98_22100) | 4576374..4576898 | - | 525 | WP_224685740.1 | RES family NAD+ phosphorylase | Toxin Detail |
| M5D98_RS22105 (M5D98_22105) | 4576895..4577281 | - | 387 | WP_224685739.1 | hypothetical protein | Antitoxin Detail |
| M5D98_RS22110 (M5D98_22110) | 4578239..4578478 | + | 240 | WP_224685738.1 | hypothetical protein | - |
| M5D98_RS22115 (M5D98_22115) | 4578828..4579226 | + | 399 | WP_224685737.1 | MAPEG family protein | - |
| M5D98_RS22120 (M5D98_22120) | 4579395..4579751 | + | 357 | WP_224685736.1 | VOC family protein | - |
| M5D98_RS22125 (M5D98_22125) | 4580052..4580519 | + | 468 | WP_224685735.1 | class I SAM-dependent methyltransferase | - |
| M5D98_RS22130 (M5D98_22130) | 4580766..4581986 | - | 1221 | WP_224685734.1 | arabinose transporter | - |
| M5D98_RS22135 (M5D98_22135) | 4582035..4582778 | - | 744 | WP_224685733.1 | SDR family oxidoreductase | - |
| M5D98_RS22140 (M5D98_22140) | 4582810..4583205 | - | 396 | WP_224685732.1 | cupin domain-containing protein | - |
| M5D98_RS22145 (M5D98_22145) | 4583225..4583695 | - | 471 | WP_224685731.1 | cyclophilin-like fold protein | - |
| M5D98_RS22150 (M5D98_22150) | 4583692..4584882 | - | 1191 | WP_224685730.1 | MFS transporter | - |
| M5D98_RS22155 (M5D98_22155) | 4585033..4585926 | + | 894 | WP_224685729.1 | HTH-type transcriptional regulator PgrR | VF |
| M5D98_RS22160 (M5D98_22160) | 4586400..4587591 | - | 1192 | Protein_4394 | IS91 family transposase ISMno24 | Transposase |
| M5D98_RS22165 (M5D98_22165) | 4587594..4588502 | - | 909 | WP_224685728.1 | IS91 family transposase ISMno24 | Transposase |
| M5D98_RS22170 (M5D98_22170) | 4588729..4588809 | - | 81 | WP_249491037.1 | hypothetical protein | - |
| M5D98_RS22175 (M5D98_22175) | 4589123..4590001 | - | 879 | WP_224685727.1 | NmrA family NAD(P)-binding protein | - |
| M5D98_RS22180 (M5D98_22180) | 4590035..4591318 | - | 1284 | WP_224685726.1 | serine hydrolase domain-containing protein | - |
| M5D98_RS22185 (M5D98_22185) | 4591505..4592401 | + | 897 | WP_224685725.1 | LysR family transcriptional regulator | - |
| M5D98_RS22190 (M5D98_22190) | 4593820..4594356 | - | 537 | WP_224685723.1 | hypothetical protein | - |
| M5D98_RS22195 (M5D98_22195) | 4594456..4595388 | - | 933 | WP_224685722.1 | NAD(P)H-binding protein | - |
| M5D98_RS22200 (M5D98_22200) | 4595744..4596484 | - | 741 | WP_224685721.1 | DUF4336 domain-containing protein | - |
| M5D98_RS22205 (M5D98_22205) | 4596619..4597062 | - | 444 | WP_224685720.1 | DUF3224 domain-containing protein | - |
| M5D98_RS22210 (M5D98_22210) | 4597094..4597759 | - | 666 | WP_224685719.1 | carboxymuconolactone decarboxylase family protein | - |
| M5D98_RS22215 (M5D98_22215) | 4598008..4598325 | + | 318 | WP_181180447.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| M5D98_RS22220 (M5D98_22220) | 4598322..4598804 | + | 483 | WP_224685718.1 | SRPBCC family protein | - |
| M5D98_RS22225 (M5D98_22225) | 4598826..4599239 | + | 414 | WP_224685717.1 | MAPEG family protein | - |
| M5D98_RS22230 (M5D98_22230) | 4599498..4600211 | + | 714 | WP_224685716.1 | HTH-type transcriptional regulator BetI | VF |
| M5D98_RS22235 (M5D98_22235) | 4600394..4601512 | - | 1119 | WP_224685715.1 | Gfo/Idh/MocA family oxidoreductase | - |
| M5D98_RS22240 (M5D98_22240) | 4601930..4603459 | - | 1530 | WP_224685714.1 | FAD-binding oxidoreductase | - |
| M5D98_RS22245 (M5D98_22245) | 4604591..4604841 | - | 251 | Protein_4411 | LysR family transcriptional regulator | - |
| M5D98_RS22250 (M5D98_22250) | 4605365..4605568 | + | 204 | Protein_4412 | TetR/AcrR family transcriptional regulator | - |
| M5D98_RS22255 (M5D98_22255) | 4605623..4606519 | - | 897 | WP_224685713.1 | HTH-type transcriptional regulator DmlR | VF |
| M5D98_RS22260 (M5D98_22260) | 4606665..4607702 | + | 1038 | WP_224685712.1 | NADH:flavin oxidoreductase | - |
| M5D98_RS22265 (M5D98_22265) | 4607817..4608308 | + | 492 | WP_224685711.1 | hypothetical protein | - |
| M5D98_RS22270 (M5D98_22270) | 4608424..4608630 | - | 207 | WP_224685710.1 | hypothetical protein | - |
| M5D98_RS22275 (M5D98_22275) | 4608871..4609503 | + | 633 | WP_224685709.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| M5D98_RS22280 (M5D98_22280) | 4609704..4610042 | - | 339 | WP_224685708.1 | YnfA family protein | - |
| M5D98_RS22285 (M5D98_22285) | 4610057..4610764 | - | 708 | WP_224685707.1 | cytochrome c biogenesis CcdA family protein | - |
| M5D98_RS22290 (M5D98_22290) | 4610766..4611155 | - | 390 | WP_224685706.1 | thioredoxin family protein | - |
| M5D98_RS22295 (M5D98_22295) | 4611157..4611765 | - | 609 | WP_224685705.1 | hypothetical protein | - |
| M5D98_RS22300 (M5D98_22300) | 4611842..4612285 | + | 444 | WP_224685704.1 | helix-turn-helix domain-containing protein | - |
| M5D98_RS22305 (M5D98_22305) | 4612309..4613123 | - | 815 | Protein_4423 | sulfite exporter TauE/SafE family protein | - |
| M5D98_RS22310 (M5D98_22310) | 4613174..4613755 | - | 582 | WP_224685813.1 | cation transporter | - |
| M5D98_RS22315 (M5D98_22315) | 4614770..4615042 | - | 273 | WP_224685703.1 | hypothetical protein | - |
| M5D98_RS22320 (M5D98_22320) | 4615075..4615287 | + | 213 | WP_224685702.1 | hypothetical protein | - |
| M5D98_RS22325 (M5D98_22325) | 4615653..4615955 | + | 303 | WP_224685701.1 | hypothetical protein | - |
| M5D98_RS22330 (M5D98_22330) | 4616023..4617509 | - | 1487 | Protein_4428 | Colistin resistance protein EmrB | VF |
| M5D98_RS22335 (M5D98_22335) | 4617680..4618918 | - | 1239 | WP_224685700.1 | Colistin resistance protein EmrA | VF |
| M5D98_RS22340 (M5D98_22340) | 4620174..4623971 | + | 3798 | WP_224685699.1 | PAS domain-containing protein | - |
| M5D98_RS22345 (M5D98_22345) | 4623968..4624615 | + | 648 | WP_023767341.1 | Response regulator protein TmoT | VF |
| M5D98_RS22350 (M5D98_22350) | 4624612..4624974 | + | 363 | WP_224685698.1 | Response regulator protein TodT | VF |
| M5D98_RS22355 (M5D98_22355) | 4624991..4625719 | + | 729 | WP_031258038.1 | Response regulator protein TodT | VF |
| M5D98_RS22360 (M5D98_22360) | 4625959..4626924 | - | 966 | WP_224685697.1 | alpha/beta hydrolase | - |
| M5D98_RS22365 (M5D98_22365) | 4627647..4628468 | + | 822 | WP_181180397.1 | alpha/beta hydrolase | - |
| M5D98_RS22370 (M5D98_22370) | 4628645..4629394 | + | 750 | WP_013896615.1 | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX | VF |
| M5D98_RS22375 (M5D98_22375) | 4629599..4629826 | - | 228 | WP_013896614.1 | DUF680 domain-containing protein | - |
| M5D98_RS22380 (M5D98_22380) | 4630245..4631015 | + | 771 | WP_085984582.1 | alpha/beta hydrolase | - |
| M5D98_RS22385 (M5D98_22385) | 4631081..4631839 | + | 759 | WP_224685696.1 | SDR family oxidoreductase | - |
| M5D98_RS22390 (M5D98_22390) | 4631911..4632312 | + | 402 | WP_013896611.1 | cupin domain-containing protein | - |
| M5D98_RS22395 (M5D98_22395) | 4632381..4633028 | + | 648 | WP_140523156.1 | hypothetical protein | - |
| M5D98_RS22400 (M5D98_22400) | 4633087..4633524 | + | 438 | WP_013896609.1 | CBS domain-containing protein | - |
| M5D98_RS22405 (M5D98_22405) | 4633731..4634465 | + | 735 | WP_224685695.1 | Blue-light-activated protein | VF |
| M5D98_RS22410 (M5D98_22410) | 4634517..4634798 | + | 282 | WP_224685694.1 | GNAT family N-acetyltransferase | - |
| M5D98_RS22415 (M5D98_22415) | 4634911..4634973 | + | 63 | Protein_4445 | DUF1810 domain-containing protein | - |
| M5D98_RS22420 (M5D98_22420) | 4635066..4635983 | - | 918 | WP_224685693.1 | pirin family protein | - |
| M5D98_RS22425 (M5D98_22425) | 4635980..4637548 | - | 1569 | WP_224685692.1 | mechanosensitive ion channel family protein | - |
| M5D98_RS22430 (M5D98_22430) | 4637653..4639002 | - | 1350 | WP_224685691.1 | cytochrome b N-terminal domain-containing protein | - |
| M5D98_RS22435 (M5D98_22435) | 4639018..4639443 | - | 426 | Protein_4449 | ubiquinol-cytochrome c reductase iron-sulfur subunit | - |
| M5D98_RS22440 (M5D98_22440) | 4639957..4640541 | + | 585 | WP_013896601.1 | glutathione binding-like protein | - |
| M5D98_RS22445 (M5D98_22445) | 4640925..4641986 | + | 1062 | WP_224685812.1 | alpha/beta hydrolase | - |
| M5D98_RS22450 (M5D98_22450) | 4642110..4643090 | + | 981 | WP_224685690.1 | Dyp-type peroxidase | - |
| M5D98_RS22455 (M5D98_22455) | 4644197..4644433 | - | 237 | WP_224685811.1 | helix-turn-helix domain-containing protein | - |
| M5D98_RS22460 (M5D98_22460) | 4644601..4645110 | + | 510 | WP_224685689.1 | helix-turn-helix transcriptional regulator | - |
| M5D98_RS22465 (M5D98_22465) | 4645127..4646380 | - | 1254 | WP_224685688.1 | CapA family protein | - |
| M5D98_RS22470 (M5D98_22470) | 4646455..4647303 | - | 849 | WP_224685687.1 | transporter substrate-binding domain-containing protein | - |
| M5D98_RS22475 (M5D98_22475) | 4647355..4648104 | - | 750 | WP_224685686.1 | ABC transporter permease subunit | - |
| M5D98_RS22480 (M5D98_22480) | 4648118..4648777 | - | 660 | WP_224685685.1 | ABC transporter permease subunit | - |
| M5D98_RS22485 (M5D98_22485) | 4649048..4650010 | + | 963 | WP_224685684.1 | LysR family transcriptional regulator | - |
| M5D98_RS22490 (M5D98_22490) | 4650168..4651262 | - | 1095 | WP_224685683.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|