MGE detailed information
MGE type: Prophage MGE length: 55228 bp
Accession: NZ_CP097181 Location: 1846009..1901236 Organism: Escherichia coli strain SH21PTE31 Replicon: chromosome
Accession: NZ_CP097181 Location: 1846009..1901236 Organism: Escherichia coli strain SH21PTE31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M4R35_RS08810 (1841877) | 1841877..1841927 | - | 51 | WP_001364200.1 | his operon leader peptide | - |
| M4R35_RS08815 (1842352) | 1842352..1843176 | + | 825 | WP_000754737.1 | SDR family oxidoreductase | - |
| M4R35_RS08820 (1843222) | 1843222..1844151 | + | 930 | WP_000803351.1 | LysR substrate-binding domain-containing protein | - |
| M4R35_RS08825 (1844366) | 1844366..1844428 | + | 63 | WP_010723108.1 | membrane protein YoeI | - |
| M4R35_RS08830 (1844418) | 1844418..1845776 | + | 1359 | WP_000019197.1 | putrescine/proton symporter PlaP | - |
| M4R35_RS08835 (1845955) | 1845955..1847013 | + | 1059 | WP_064670362.1 | thiosulfate utilization transporter TsuA/YeeE | - |
| M4R35_RS08840 (1847027) | 1847027..1847254 | + | 228 | WP_000985273.1 | thiosulfate utilization sulfurtransferase TsuB/YeeD | - |
| M4R35_RS08845 (1847297) | 1847297..1848721 | - | 1425 | WP_085438546.1 | exodeoxyribonuclease I | - |
| M4R35_RS08850 (1848903) | 1848903..1850081 | + | 1179 | WP_048266533.1 | hypothetical protein ; Integrase | Integrase |
| M4R35_RS08855 (1850062) | 1850062..1850253 | - | 192 | WP_000132739.1 | AlpA family phage regulatory protein | - |
| M4R35_RS08860 (1850593) | 1850593..1850760 | - | 168 | WP_000545720.1 | hypothetical protein | - |
| M4R35_RS08865 (1850861) | 1850861..1851163 | - | 303 | WP_001309625.1 | Lar family restriction alleviation protein | - |
| M4R35_RS08870 (1851160) | 1851160..1851657 | - | 498 | WP_249398383.1 | DUF550 domain-containing protein | - |
| M4R35_RS08875 (1851631) | 1851631..1851756 | - | 126 | Protein_1745 | DUF550 domain-containing protein | - |
| M4R35_RS08880 (1851759) | 1851759..1851950 | - | 192 | WP_212480433.1 | hypothetical protein | - |
| M4R35_RS08885 (1851952) | 1851952..1852404 | - | 453 | Protein_1747 | ead/Ea22-like family protein | - |
| M4R35_RS08890 (1852435) | 1852435..1852644 | - | 210 | Protein_1748 | ead/Ea22-like family protein | - |
| M4R35_RS08895 (1852646) | 1852646..1852945 | - | 300 | WP_000118152.1 | hypothetical protein | - |
| M4R35_RS08900 (1852942) | 1852942..1853109 | - | 168 | WP_130562315.1 | DUF2737 family protein | - |
| M4R35_RS08905 (1853120) | 1853120..1853413 | - | 294 | WP_001111335.1 | DUF2856 family protein | - |
| M4R35_RS08910 (1853427) | 1853427..1853894 | - | 468 | WP_212480442.1 | hypothetical protein | - |
| M4R35_RS08915 (1853910) | 1853910..1854371 | - | 462 | WP_212480443.1 | single-stranded DNA-binding protein | - |
| M4R35_RS08920 (1854372) | 1854372..1855079 | - | 708 | WP_000365277.1 | Rad52/Rad22 family DNA repair protein | - |
| M4R35_RS08925 (1855088) | 1855088..1855258 | - | 171 | WP_000050554.1 | hypothetical protein | - |
| M4R35_RS08930 (1855334) | 1855334..1855504 | - | 171 | WP_001183771.1 | hypothetical protein | - |
| M4R35_RS08935 (1855731) | 1855731..1855982 | - | 252 | WP_212480446.1 | hypothetical protein | - |
| M4R35_RS08940 (1856164) | 1856164..1856469 | - | 306 | WP_212480448.1 | hypothetical protein | - |
| M4R35_RS08945 (1856456) | 1856456..1856872 | + | 417 | WP_249398376.1 | hypothetical protein | - |
| M4R35_RS08950 (1857110) | 1857110..1857406 | - | 297 | WP_113454697.1 | hypothetical protein | - |
| M4R35_RS08955 (1857446) | 1857446..1858153 | - | 708 | WP_000846394.1 | helix-turn-helix transcriptional regulator | - |
| M4R35_RS08960 (1858265) | 1858265..1858489 | + | 225 | WP_001054987.1 | helix-turn-helix domain-containing protein | - |
| M4R35_RS08965 (1858599) | 1858599..1858892 | + | 294 | WP_033546449.1 | lambda phage CII family protein | - |
| M4R35_RS08970 (1858925) | 1858925..1859071 | + | 147 | WP_000166207.1 | DUF2740 family protein | - |
| M4R35_RS08975 (1859064) | 1859064..1859924 | + | 861 | WP_000067068.1 | replication protein | - |
| M4R35_RS08980 (1860032) | 1860032..1861912 | + | 1881 | WP_212480450.1 | toprim domain-containing protein | - |
| M4R35_RS08985 (1861995) | 1861995..1862606 | + | 612 | WP_212480451.1 | HNH endonuclease | - |
| M4R35_RS08990 (1862655) | 1862655..1863095 | + | 441 | WP_000736904.1 | recombination protein NinB | - |
| M4R35_RS08995 (1863092) | 1863092..1863619 | + | 528 | WP_052167194.1 | HNH endonuclease | - |
| M4R35_RS09000 (1863616) | 1863616..1864146 | + | 531 | WP_000589785.1 | phage N-6-adenine-methyltransferase | - |
| M4R35_RS09005 (1864143) | 1864143..1864319 | + | 177 | WP_001254255.1 | NinE family protein | - |
| M4R35_RS09010 (1864322) | 1864322..1864681 | + | 360 | WP_001544373.1 | DUF2591 family protein | - |
| M4R35_RS09015 (1864674) | 1864674..1864850 | + | 177 | WP_000950944.1 | protein NinF | - |
| M4R35_RS09020 (1864843) | 1864843..1865448 | + | 606 | WP_032178589.1 | recombination protein NinG | - |
| M4R35_RS09025 (1865445) | 1865445..1865651 | + | 207 | WP_001404860.1 | phage NinH family protein | - |
| M4R35_RS09030 (1865629) | 1865629..1866300 | + | 672 | WP_212480453.1 | serine/threonine protein phosphatase | - |
| M4R35_RS09035 (1866291) | 1866291..1866809 | + | 519 | WP_212480455.1 | antiterminator Q family protein | - |
| M4R35_RS09040 (1867317) | 1867317..1867640 | + | 324 | WP_000783734.1 | phage holin, lambda family | - |
| M4R35_RS09045 (1867624) | 1867624..1868100 | + | 477 | WP_000229392.1 | glycoside hydrolase family protein | - |
| M4R35_RS09050 (1868097) | 1868097..1868534 | + | 438 | WP_021571391.1 | lysis protein | - |
| M4R35_RS09055 (1868522) | 1868522..1868674 | + | 153 | WP_001139680.1 | hypothetical protein | - |
| M4R35_RS09060 (1868914) | 1868914..1869294 | + | 381 | WP_000999674.1 | Gp49 family protein | - |
| M4R35_RS09065 (1869398) | 1869398..1869640 | + | 243 | WP_000807788.1 | DUF2560 family protein | - |
| M4R35_RS09070 (1869643) | 1869643..1870083 | + | 441 | WP_000113732.1 | hypothetical protein | - |
| M4R35_RS09075 (1870080) | 1870080..1871495 | + | 1416 | WP_212480457.1 | PBSX family phage terminase large subunit | - |
| M4R35_RS09080 (1871497) | 1871497..1873695 | + | 2199 | WP_212480459.1 | portal protein | - |
| M4R35_RS09085 (1873786) | 1873786..1874679 | + | 894 | WP_021560734.1 | phage scaffold protein | - |
| M4R35_RS09090 (1874698) | 1874698..1875951 | + | 1254 | WP_032284932.1 | P22 phage major capsid protein family protein | - |
| M4R35_RS09095 (1875993) | 1875993..1876181 | + | 189 | WP_001389518.1 | hypothetical protein | - |
| M4R35_RS09100 (1876162) | 1876162..1876623 | + | 462 | WP_032216290.1 | packaged DNA stabilization gp4 family protein | - |
| M4R35_RS09105 (1876633) | 1876633..1878051 | + | 1419 | WP_212480461.1 | packaged DNA stabilization protein gp10 | - |
| M4R35_RS09110 (1878051) | 1878051..1878899 | + | 849 | WP_097492995.1 | tail needle knob protein | - |
| M4R35_RS09115 (1878899) | 1878899..1879354 | + | 456 | WP_000614042.1 | DUF2824 family protein | - |
| M4R35_RS09120 (1879357) | 1879357..1880049 | + | 693 | WP_212480463.1 | DNA transfer protein | - |
| M4R35_RS09125 (1880059) | 1880059..1881390 | + | 1332 | WP_212480465.1 | phage DNA ejection protein | - |
| M4R35_RS09130 (1881391) | 1881391..1883784 | + | 2394 | WP_212480467.1 | lytic transglycosylase domain-containing protein | - |
| M4R35_RS09135 (1883949) | 1883949..1885985 | + | 2037 | WP_249398377.1 | phage tailspike protein | - |
| M4R35_RS09140 (1886046) | 1886046..1887077 | + | 1032 | WP_104726698.1 | acyltransferase | - |
| M4R35_RS09145 (1887181) | 1887181..1887570 | + | 390 | WP_154205255.1 | S24 family peptidase | - |
| M4R35_RS09150 (1887914) | 1887914..1889080 | + | 1167 | WP_016247321.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| M4R35_RS09155 (1889199) | 1889199..1889672 | + | 474 | WP_001105415.1 | DNA gyrase inhibitor SbmC | - |
| M4R35_RS09160 (1889870) | 1889870..1890928 | + | 1059 | WP_064670363.1 | FUSC family protein | - |
| M4R35_RS09165 (1891100) | 1891100..1891429 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| M4R35_RS09170 (1891530) | 1891530..1891664 | - | 135 | WP_001297944.1 | EutP/PduV family microcompartment system protein | - |
| M4R35_RS09175 (1891784) | 1891784..1891912 | + | 129 | Protein_1805 | transposase domain-containing protein | - |
| M4R35_RS09180 (1892201) | 1892201..1892281 | - | 81 | Protein_1806 | hypothetical protein | - |
| M4R35_RS09185 (1892327) | 1892327..1892521 | - | 195 | WP_000988600.1 | DUF5983 family protein | - |
| M4R35_RS09190 (1892518) | 1892518..1892892 | - | 375 | WP_000854814.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| M4R35_RS09195 (1892981) | 1892981..1893349 | - | 369 | WP_001285585.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| M4R35_RS09200 (1893423) | 1893423..1893644 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| M4R35_RS09205 (1893707) | 1893707..1894183 | - | 477 | WP_001186773.1 | RadC family protein | - |
| M4R35_RS09210 (1894199) | 1894199..1894678 | - | 480 | WP_000860076.1 | antirestriction protein | - |
| M4R35_RS09215 (1894760) | 1894760..1895581 | - | 822 | WP_064670364.1 | DUF932 domain-containing protein | - |
| M4R35_RS09220 (1895802) | 1895802..1896212 | - | 411 | WP_000846713.1 | hypothetical protein | - |
| M4R35_RS09225 (1896228) | 1896228..1896911 | - | 684 | WP_000775500.1 | hypothetical protein | - |
| M4R35_RS09230 (1897047) | 1897047..1898117 | - | 1071 | WP_000102643.1 | patatin-like phospholipase family protein | - |
| M4R35_RS09235 (1898114) | 1898114..1898725 | - | 612 | Protein_1817 | diguanylate cyclase regulator RdcB family protein | - |
| M4R35_RS09240 (1898774) | 1898774..1899175 | + | 402 | WP_000270974.1 | putative zinc ribbon protein | - |
| M4R35_RS09245 (1899163) | 1899163..1899573 | + | 411 | WP_001221617.1 | zinc-ribbon domain-containing protein | - |
| M4R35_RS09250 (1899857) | 1899857..1901476 | + | 1620 | Protein_1820 | ISL3 family transposase ISEc38 | Transposase |
| M4R35_RS09255 (1901556) | 1901556..1901848 | + | 293 | Protein_1821 | gamma-glutamyltransferase | - |
| M4R35_RS09260 (1901888) | 1901888..1902922 | - | 1035 | WP_000656352.1 | phosphotriesterase | - |
| M4R35_RS09265 (1902925) | 1902925..1903890 | - | 966 | Protein_1823 | DMT family transporter | - |
| M4R35_RS09270 (1903947) | 1903947..1904705 | - | 759 | WP_001066368.1 | glutamine amidotransferase | - |
| M4R35_RS09275 (1904719) | 1904719..1905932 | - | 1214 | Protein_1825 | PfkB family carbohydrate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|