MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 148732 bp
Accession: NZ_CP097105 Location: 1..148732 Organism: Pseudomonas sp. NY11382 Replicon: plasmid pNY11382-NR
Accession: NZ_CP097105 Location: 1..148732 Organism: Pseudomonas sp. NY11382 Replicon: plasmid pNY11382-NR
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M2J80_RS28380 (M2J80_28370) | 151..1275 | + | 1125 | WP_009684356.1 | AAA family ATPase | - |
| M2J80_RS28385 (M2J80_28375) | 1365..2321 | + | 957 | WP_015026520.1 | ParB/RepB/Spo0J family partition protein | - |
| M2J80_RS28390 (M2J80_28380) | 2706..4025 | - | 1320 | WP_009684354.1 | replication initiation protein | - |
| M2J80_RS28395 (M2J80_28385) | 5305..5823 | + | 519 | WP_009684352.1 | hypothetical protein | - |
| M2J80_RS28400 (M2J80_28390) | 5957..6610 | + | 654 | WP_009684351.1 | DotI/IcmL family type IV secretion protein | - |
| M2J80_RS28405 (M2J80_28395) | 6607..7527 | + | 921 | WP_009684350.1 | DotH/IcmK family type IV secretion protein | - |
| M2J80_RS28410 (M2J80_28400) | 7551..8765 | + | 1215 | WP_171021351.1 | DotG/IcmE/VirB10 family protein | - |
| M2J80_RS28415 (M2J80_28405) | 8765..9694 | + | 930 | WP_009684348.1 | hypothetical protein | - |
| M2J80_RS28420 (M2J80_28410) | 9705..10238 | + | 534 | WP_009684347.1 | hypothetical protein | - |
| M2J80_RS28425 (M2J80_28415) | 10256..10648 | + | 393 | WP_009684346.1 | hypothetical protein | - |
| M2J80_RS28430 (M2J80_28420) | 10663..11376 | + | 714 | WP_009684345.1 | HNH endonuclease | - |
| M2J80_RS28435 (M2J80_28425) | 11376..12608 | + | 1233 | WP_009684344.1 | hypothetical protein | - |
| M2J80_RS28440 (M2J80_28430) | 12601..12870 | + | 270 | WP_009684343.1 | hypothetical protein | - |
| M2J80_RS28445 (M2J80_28435) | 12867..15893 | + | 3027 | WP_023118093.1 | hypothetical protein | - |
| M2J80_RS28450 (M2J80_28440) | 15890..16324 | + | 435 | WP_009684340.1 | hypothetical protein | - |
| M2J80_RS28455 (M2J80_28445) | 16504..16761 | + | 258 | WP_009684339.1 | hypothetical protein | - |
| M2J80_RS28460 (M2J80_28450) | 16903..17508 | + | 606 | WP_009684338.1 | hypothetical protein | - |
| M2J80_RS28465 (M2J80_28455) | 17712..18488 | + | 777 | WP_023118091.1 | hypothetical protein | - |
| M2J80_RS28470 (M2J80_28460) | 18500..18910 | + | 411 | WP_009684336.1 | hypothetical protein | - |
| M2J80_RS28475 (M2J80_28465) | 19201..20091 | + | 891 | WP_023118090.1 | hypothetical protein | - |
| M2J80_RS28480 (M2J80_28470) | 20142..20618 | + | 477 | WP_009684334.1 | hypothetical protein | - |
| M2J80_RS28485 (M2J80_28475) | 20750..22264 | + | 1515 | WP_009684333.1 | UvrD-helicase domain-containing protein | - |
| M2J80_RS28490 (M2J80_28480) | 22300..23601 | + | 1302 | WP_009684332.1 | hypothetical protein | - |
| M2J80_RS28495 (M2J80_28485) | 23676..28904 | + | 5229 | WP_009684331.1 | strawberry notch C-terminal domain-containing protein | - |
| M2J80_RS28500 (M2J80_28490) | 28914..29258 | + | 345 | WP_007975543.1 | hypothetical protein | - |
| M2J80_RS28505 (M2J80_28495) | 29275..29553 | - | 279 | WP_009684330.1 | hypothetical protein | - |
| M2J80_RS28510 (M2J80_28500) | 29651..31798 | + | 2148 | WP_023118088.1 | DNA topoisomerase | - |
| M2J80_RS28515 (M2J80_28505) | 31808..32491 | + | 684 | WP_023118087.1 | hypothetical protein | - |
| M2J80_RS28520 (M2J80_28510) | 32547..33062 | + | 516 | WP_009684326.1 | hypothetical protein | - |
| M2J80_RS28525 (M2J80_28515) | 33090..33803 | + | 714 | WP_009684325.1 | EAL domain-containing protein | - |
| M2J80_RS28530 (M2J80_28520) | 33878..34087 | - | 210 | WP_023118086.1 | hypothetical protein | - |
| M2J80_RS28535 (M2J80_28525) | 34110..35516 | + | 1407 | WP_009684324.1 | hypothetical protein | - |
| M2J80_RS28540 (M2J80_28530) | 35964..36290 | + | 327 | WP_009684322.1 | hypothetical protein | - |
| M2J80_RS28545 (M2J80_28535) | 36479..36943 | + | 465 | WP_031642858.1 | hypothetical protein | - |
| M2J80_RS28550 (M2J80_28540) | 37377..37727 | + | 351 | WP_009684320.1 | hypothetical protein | - |
| M2J80_RS28555 (M2J80_28545) | 37806..39785 | + | 1980 | WP_009684319.1 | DEAD/DEAH box helicase | - |
| M2J80_RS28560 (M2J80_28550) | 39799..40512 | + | 714 | WP_009684318.1 | hypothetical protein | - |
| M2J80_RS28565 (M2J80_28555) | 40605..40922 | + | 318 | WP_110389097.1 | hypothetical protein | - |
| M2J80_RS28570 (M2J80_28560) | 41160..41576 | + | 417 | WP_033690668.1 | hypothetical protein | - |
| M2J80_RS28575 (M2J80_28565) | 41763..43109 | + | 1347 | WP_009684314.1 | replicative DNA helicase | - |
| M2J80_RS28580 (M2J80_28570) | 43136..43585 | + | 450 | WP_015026481.1 | hypothetical protein | - |
| M2J80_RS28585 (M2J80_28575) | 43822..44274 | + | 453 | WP_009684312.1 | hypothetical protein | - |
| M2J80_RS28590 (M2J80_28580) | 44325..45047 | - | 723 | WP_009684311.1 | hypothetical protein | - |
| M2J80_RS28595 (M2J80_28585) | 45044..45397 | - | 354 | WP_023118080.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| M2J80_RS28600 (M2J80_28590) | 45394..45642 | - | 249 | WP_009684309.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| M2J80_RS28605 (M2J80_28595) | 45639..46058 | - | 420 | WP_033690665.1 | hypothetical protein | - |
| M2J80_RS28610 (M2J80_28600) | 46132..46608 | - | 477 | WP_023118079.1 | single-stranded DNA-binding protein | - |
| M2J80_RS28615 (M2J80_28605) | 46637..47056 | - | 420 | WP_009683787.1 | hypothetical protein | - |
| M2J80_RS28620 (M2J80_28610) | 47065..47748 | - | 684 | WP_009683788.1 | hypothetical protein | - |
| M2J80_RS28625 (M2J80_28615) | 47745..48281 | - | 537 | WP_009683789.1 | hypothetical protein | - |
| M2J80_RS28630 (M2J80_28620) | 48278..48508 | - | 231 | WP_009683790.1 | hypothetical protein | - |
| M2J80_RS28635 (M2J80_28625) | 48498..50573 | - | 2076 | WP_009683791.1 | DNA cytosine methyltransferase | - |
| M2J80_RS28640 (M2J80_28630) | 50579..51511 | - | 933 | WP_023118078.1 | recombination-associated protein RdgC | - |
| M2J80_RS28645 (M2J80_28635) | 51520..51804 | - | 285 | WP_009683793.1 | hypothetical protein | - |
| M2J80_RS28650 (M2J80_28640) | 52223..52510 | + | 288 | WP_131201113.1 | hypothetical protein | - |
| M2J80_RS28655 (M2J80_28645) | 52576..52854 | + | 279 | WP_009683795.1 | HU family DNA-binding protein | - |
| M2J80_RS28660 (M2J80_28650) | 52971..53831 | + | 861 | WP_023118077.1 | SprT-like domain-containing protein | - |
| M2J80_RS28665 (M2J80_28655) | 53856..54236 | + | 381 | WP_031642852.1 | hypothetical protein | - |
| M2J80_RS28670 (M2J80_28660) | 54257..54457 | + | 201 | WP_009683799.1 | hypothetical protein | - |
| M2J80_RS28675 (M2J80_28665) | 54524..56143 | + | 1620 | WP_043092171.1 | DNA sulfur modification protein DndB | - |
| M2J80_RS28680 (M2J80_28670) | 56867..57136 | - | 270 | Protein_60 | transposase | - |
| M2J80_RS28685 (M2J80_28675) | 57229..57978 | - | 750 | WP_003460139.1 | IS21-like element IS1474 family helper ATPase IstB | - |
| M2J80_RS28690 (M2J80_28680) | 57866..59551 | - | 1686 | WP_024360721.1 | IS21 family transposase | - |
| M2J80_RS28695 (M2J80_28685) | 59724..60143 | + | 420 | WP_132579035.1 | hypothetical protein | - |
| M2J80_RS28700 (M2J80_28690) | 60147..60542 | + | 396 | WP_009683805.1 | hypothetical protein | - |
| M2J80_RS28705 (M2J80_28695) | 60635..61363 | + | 729 | WP_009683806.1 | metallophosphoesterase family protein | - |
| M2J80_RS28710 (M2J80_28700) | 61429..61626 | + | 198 | WP_033690579.1 | hypothetical protein | - |
| M2J80_RS28715 (M2J80_28705) | 62068..62238 | - | 171 | WP_157050342.1 | hypothetical protein | - |
| M2J80_RS28720 (M2J80_28710) | 62960..63166 | + | 207 | WP_009683810.1 | hypothetical protein | - |
| M2J80_RS28725 (M2J80_28715) | 63310..63675 | + | 366 | WP_009683811.1 | DNA binding protein | - |
| M2J80_RS28730 (M2J80_28720) | 64125..64808 | + | 684 | WP_009683812.1 | serine acetyltransferase | - |
| M2J80_RS28735 (M2J80_28725) | 64814..66157 | - | 1344 | WP_270152005.1 | aminodeoxychorismate synthase component I | - |
| M2J80_RS28740 (M2J80_28730) | 66201..66764 | - | 564 | WP_009683814.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| M2J80_RS28745 (M2J80_28735) | 66860..68207 | - | 1348 | Protein_73 | gluconate:H+ symporter | - |
| M2J80_RS28750 (M2J80_28740) | 68433..69329 | - | 897 | WP_009683817.1 | formyltetrahydrofolate deformylase | - |
| M2J80_RS28755 (M2J80_28745) | 69341..70243 | - | 903 | WP_029380372.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| M2J80_RS28760 (M2J80_28750) | 70345..71670 | - | 1326 | WP_009683819.1 | D-serine ammonia-lyase | - |
| M2J80_RS28765 (M2J80_28755) | 71729..73000 | - | 1272 | WP_009683820.1 | serine hydroxymethyltransferase | - |
| M2J80_RS28770 (M2J80_28760) | 73134..74033 | + | 900 | WP_029380371.1 | LysR family transcriptional regulator | - |
| M2J80_RS28775 (M2J80_28765) | 74416..75897 | + | 1482 | WP_016715859.1 | APC family permease | - |
| M2J80_RS28780 (M2J80_28770) | 75952..77451 | + | 1500 | WP_047150111.1 | aldehyde dehydrogenase | - |
| M2J80_RS28785 (M2J80_28775) | 77465..79147 | + | 1683 | WP_016715857.1 | choline dehydrogenase | - |
| M2J80_RS28790 (M2J80_28780) | 79193..80215 | + | 1023 | WP_110676717.1 | Ldh family oxidoreductase | - |
| M2J80_RS28795 (M2J80_28785) | 80411..81091 | + | 681 | WP_004574802.1 | cupin domain-containing protein | - |
| M2J80_RS28800 (M2J80_28790) | 81088..81672 | + | 585 | WP_004574803.1 | TetR/AcrR family transcriptional regulator | - |
| M2J80_RS28805 (M2J80_28795) | 81732..82508 | + | 777 | WP_004574804.1 | SDR family oxidoreductase | - |
| M2J80_RS28810 (M2J80_28800) | 82523..83089 | + | 567 | WP_004574805.1 | OsmC family protein | - |
| M2J80_RS28815 (M2J80_28805) | 83384..83944 | + | 561 | WP_009681541.1 | recombinase family protein | - |
| M2J80_RS28820 (M2J80_28810) | 83948..84354 | + | 407 | Protein_88 | DUF4158 domain-containing protein | - |
| M2J80_RS28825 (M2J80_28815) | 84394..84864 | + | 471 | WP_033690059.1 | Tn3 family transposase | - |
| M2J80_RS28830 (M2J80_28820) | 85101..85334 | + | 234 | WP_009681542.1 | hypothetical protein | - |
| M2J80_RS28835 (M2J80_28825) | 85376..91456 | - | 6081 | WP_009681543.1 | hypothetical protein | - |
| M2J80_RS28840 (M2J80_28830) | 91477..92097 | - | 621 | WP_009681544.1 | hypothetical protein | - |
| M2J80_RS28845 (M2J80_28835) | 92162..93103 | - | 942 | WP_009681545.1 | tyrosine-type recombinase/integrase | - |
| M2J80_RS28850 (M2J80_28840) | 93226..93390 | + | 165 | WP_009681546.1 | hypothetical protein | - |
| M2J80_RS28855 (M2J80_28845) | 93494..94219 | - | 726 | WP_270151917.1 | hypothetical protein | - |
| M2J80_RS28860 (M2J80_28850) | 94326..95075 | - | 750 | WP_003460139.1 | IS21-like element IS1474 family helper ATPase IstB | - |
| M2J80_RS28865 (M2J80_28855) | 94963..96648 | - | 1686 | WP_024360721.1 | IS21 family transposase | - |
| M2J80_RS28870 (M2J80_28860) | 96835..97314 | - | 480 | WP_270151919.1 | hypothetical protein | - |
| M2J80_RS28875 (M2J80_28865) | 97330..98952 | - | 1623 | WP_009681548.1 | zincin-like metallopeptidase domain-containing protein | - |
| M2J80_RS28880 (M2J80_28870) | 98958..99116 | - | 159 | WP_009681549.1 | hypothetical protein | - |
| M2J80_RS28885 (M2J80_28875) | 99312..99713 | - | 402 | WP_009681550.1 | hypothetical protein | - |
| M2J80_RS28890 (M2J80_28880) | 99796..100590 | - | 795 | WP_009681551.1 | thiol:disulfide interchange protein DsbG | - |
| M2J80_RS28895 (M2J80_28885) | 100578..101198 | - | 621 | WP_009681552.1 | DUF882 domain-containing protein | - |
| M2J80_RS28900 (M2J80_28890) | 101195..103723 | - | 2529 | WP_023118070.1 | hypothetical protein | - |
| M2J80_RS28905 (M2J80_28895) | 103738..104529 | - | 792 | WP_023118069.1 | hypothetical protein | - |
| M2J80_RS28910 (M2J80_28900) | 104510..105652 | - | 1143 | WP_009681556.1 | hypothetical protein | - |
| M2J80_RS28915 (M2J80_28905) | 105649..106077 | - | 429 | WP_009681557.1 | lytic transglycosylase domain-containing protein | - |
| M2J80_RS28920 (M2J80_28910) | 106074..106541 | - | 468 | WP_009681558.1 | hypothetical protein | - |
| M2J80_RS28925 (M2J80_28915) | 106534..107706 | - | 1173 | WP_009681559.1 | hypothetical protein | - |
| M2J80_RS28930 (M2J80_28920) | 107706..108083 | - | 378 | WP_023118068.1 | hypothetical protein | - |
| M2J80_RS28935 (M2J80_28925) | 108214..108522 | - | 309 | WP_223813025.1 | hypothetical protein | - |
| M2J80_RS28940 (M2J80_28930) | 108494..110071 | - | 1578 | WP_110676739.1 | toprim domain-containing protein | - |
| M2J80_RS28945 (M2J80_28935) | 110084..110662 | - | 579 | WP_065861622.1 | hypothetical protein | - |
| M2J80_RS28950 (M2J80_28940) | 110677..110937 | - | 261 | WP_009681564.1 | hypothetical protein | - |
| M2J80_RS28955 (M2J80_28945) | 110939..112042 | - | 1104 | WP_023118066.1 | hypothetical protein | - |
| M2J80_RS28960 (M2J80_28950) | 112058..113440 | - | 1383 | WP_033955280.1 | hypothetical protein | - |
| M2J80_RS28965 (M2J80_28955) | 113608..114039 | + | 432 | WP_023118063.1 | type IV pilus biogenesis protein PilM | - |
| M2J80_RS28970 (M2J80_28960) | 114260..114793 | + | 534 | WP_009685680.1 | hypothetical protein | - |
| M2J80_RS28975 (M2J80_28965) | 114798..115181 | + | 384 | WP_009685679.1 | hypothetical protein | - |
| M2J80_RS28980 (M2J80_28970) | 115281..115799 | - | 519 | WP_009685678.1 | hypothetical protein | - |
| M2J80_RS28985 (M2J80_28975) | 115780..116292 | - | 513 | WP_015026433.1 | DUF6036 family nucleotidyltransferase | - |
| M2J80_RS28990 (M2J80_28980) | 116494..117141 | - | 648 | WP_023118060.1 | hypothetical protein | - |
| M2J80_RS28995 (M2J80_28985) | 117152..117664 | - | 513 | WP_009685675.1 | hypothetical protein | - |
| M2J80_RS29000 (M2J80_28990) | 118045..119136 | - | 1092 | WP_023118059.1 | hypothetical protein | - |
| M2J80_RS29005 (M2J80_28995) | 119136..120266 | - | 1131 | WP_110389093.1 | hypothetical protein | - |
| M2J80_RS29010 (M2J80_29000) | 120282..120773 | - | 492 | WP_009685668.1 | hypothetical protein | - |
| M2J80_RS29015 (M2J80_29005) | 120766..121263 | - | 498 | WP_015026427.1 | hypothetical protein | - |
| M2J80_RS29020 (M2J80_29010) | 121576..123840 | + | 2265 | WP_009685665.1 | DotA/TraY family protein | - |
| M2J80_RS29025 (M2J80_29015) | 123949..124284 | - | 336 | WP_009685664.1 | hypothetical protein | - |
| M2J80_RS29030 (M2J80_29020) | 124437..124718 | + | 282 | WP_009685663.1 | helix-turn-helix transcriptional regulator | - |
| M2J80_RS29035 (M2J80_29025) | 124690..125859 | + | 1170 | WP_023118056.1 | tyrosine-type recombinase/integrase | - |
| M2J80_RS29040 (M2J80_29030) | 125905..126138 | + | 234 | Protein_132 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| M2J80_RS29045 (M2J80_29035) | 128345..129769 | - | 1425 | WP_132579000.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| M2J80_RS29050 (M2J80_29040) | 129766..130743 | - | 978 | WP_009684382.1 | ATPase, T2SS/T4P/T4SS family | - |
| M2J80_RS29055 (M2J80_29045) | 130770..131336 | - | 567 | WP_023118099.1 | type 4 pilus major pilin | - |
| M2J80_RS29060 (M2J80_29050) | 131369..132451 | - | 1083 | WP_009684380.1 | type II secretion system F family protein | - |
| M2J80_RS29065 (M2J80_29055) | 132453..134015 | - | 1563 | WP_009684379.1 | ATPase, T2SS/T4P/T4SS family | - |
| M2J80_RS29070 (M2J80_29060) | 134035..134556 | - | 522 | WP_270151955.1 | type IV pilus biogenesis protein PilP | - |
| M2J80_RS29075 (M2J80_29065) | 134543..135886 | - | 1344 | WP_023118098.1 | type 4b pilus protein PilO2 | - |
| M2J80_RS29080 (M2J80_29070) | 135889..137580 | - | 1692 | WP_015026533.1 | PilN family type IVB pilus formation outer membrane protein | - |
| M2J80_RS29085 (M2J80_29075) | 137583..138425 | - | 843 | WP_052960512.1 | toxin co-regulated pilus biosynthesis Q family protein | - |
| M2J80_RS29090 (M2J80_29080) | 138453..138899 | - | 447 | WP_009684372.1 | hypothetical protein | - |
| M2J80_RS29095 (M2J80_29085) | 138903..140036 | - | 1134 | WP_009684371.1 | ParM/StbA family protein | - |
| M2J80_RS29100 (M2J80_29090) | 140047..140316 | - | 270 | WP_009684370.1 | IcmT/TraK family protein | - |
| M2J80_RS29105 (M2J80_29095) | 140309..141514 | - | 1206 | WP_009684369.1 | ATPase, T2SS/T4P/T4SS family | - |
| M2J80_RS29110 (M2J80_29100) | 141511..142320 | - | 810 | WP_023118096.1 | type IV secretory system conjugative DNA transfer family protein | - |
| M2J80_RS29115 (M2J80_29105) | 142307..142795 | - | 489 | WP_009684367.1 | DotD/TraH family lipoprotein | - |
| M2J80_RS29120 (M2J80_29110) | 143322..144293 | + | 972 | WP_009684366.1 | site-specific integrase | - |
| M2J80_RS29125 (M2J80_29115) | 144352..144714 | - | 363 | WP_009684365.1 | DNA binding protein | - |
| M2J80_RS29130 (M2J80_29120) | 144827..145588 | - | 762 | WP_009684364.1 | hypothetical protein | - |
| M2J80_RS29135 (M2J80_29125) | 145608..145913 | - | 306 | WP_009684363.1 | hypothetical protein | - |
| M2J80_RS29140 (M2J80_29130) | 145955..146149 | - | 195 | WP_131201116.1 | hypothetical protein | - |
| M2J80_RS29145 (M2J80_29135) | 146162..146503 | - | 342 | WP_009684362.1 | hypothetical protein | - |
| M2J80_RS29150 (M2J80_29140) | 146513..146746 | - | 234 | WP_009684361.1 | hypothetical protein | - |
| M2J80_RS29155 (M2J80_29145) | 146806..147333 | - | 528 | WP_009684360.1 | hypothetical protein | - |
| M2J80_RS29160 (M2J80_29150) | 147388..148311 | - | 924 | WP_023118095.1 | hypothetical protein | - |
| M2J80_RS29165 (M2J80_29155) | 148311..148583 | - | 273 | WP_009684357.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|