MGE detailed information
MGE type: Prophage MGE length: 53586 bp
Accession: NZ_CP097103 Location: 287984..341569 Organism: Pseudomonas sp. NY11382 Replicon: chromosome
Accession: NZ_CP097103 Location: 287984..341569 Organism: Pseudomonas sp. NY11382 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M2J80_RS01210 (M2J80_01210) | 283977..285059 | + | 1083 | WP_161891556.1 | hypothetical protein | - |
| M2J80_RS01215 (M2J80_01215) | 285801..286076 | - | 276 | WP_161891557.1 | hypothetical protein | - |
| M2J80_RS01220 (M2J80_01220) | 286073..287053 | - | 981 | WP_270149156.1 | integrase domain-containing protein | - |
| M2J80_RS01225 (M2J80_01225) | 287984..288345 | - | 362 | Protein_234 | hypothetical protein ; Integrase | Integrase |
| M2J80_RS01230 (M2J80_01230) | 288548..288898 | + | 351 | WP_115293252.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| M2J80_RS01235 (M2J80_01235) | 288895..289218 | - | 324 | WP_009682074.1 | helix-turn-helix transcriptional regulator | - |
| M2J80_RS01240 (M2J80_01240) | 289880..290947 | + | 1068 | WP_181098198.1 | hypothetical protein | - |
| M2J80_RS01245 (M2J80_01245) | 291038..292213 | - | 1176 | WP_270149163.1 | hypothetical protein ; Integrase | Integrase |
| M2J80_RS01250 (M2J80_01250) | 292210..292422 | - | 213 | WP_270149165.1 | hypothetical protein | - |
| M2J80_RS01255 | 292513..292647 | - | 135 | WP_270149167.1 | hypothetical protein | - |
| M2J80_RS01260 (M2J80_01255) | 292651..292935 | - | 285 | WP_270149170.1 | hypothetical protein | - |
| M2J80_RS01265 (M2J80_01260) | 293002..293295 | - | 294 | WP_270149173.1 | hypothetical protein | - |
| M2J80_RS01270 (M2J80_01265) | 293309..296107 | - | 2799 | WP_270151188.1 | toprim domain-containing protein | - |
| M2J80_RS01275 (M2J80_01270) | 296119..296364 | - | 246 | WP_054888407.1 | hypothetical protein | - |
| M2J80_RS01280 (M2J80_01275) | 296441..296809 | - | 369 | WP_212623591.1 | hypothetical protein | - |
| M2J80_RS01285 (M2J80_01280) | 296806..297108 | - | 303 | WP_161891564.1 | ogr/Delta-like zinc finger family protein | - |
| M2J80_RS01290 (M2J80_01285) | 297105..297587 | - | 483 | WP_161891565.1 | YmfL family putative regulatory protein | - |
| M2J80_RS01295 (M2J80_01290) | 297617..297829 | - | 213 | WP_161891566.1 | DNA-binding protein | - |
| M2J80_RS01300 (M2J80_01295) | 297912..298253 | + | 342 | WP_161891567.1 | helix-turn-helix transcriptional regulator | - |
| M2J80_RS01305 (M2J80_01300) | 298331..298999 | + | 669 | WP_270149181.1 | hypothetical protein | - |
| M2J80_RS01310 (M2J80_01305) | 299257..300525 | - | 1269 | WP_270151191.1 | phage late control D family protein | - |
| M2J80_RS01315 (M2J80_01310) | 300531..300971 | - | 441 | WP_161891569.1 | phage tail protein | - |
| M2J80_RS01320 (M2J80_01315) | 300978..304460 | - | 3483 | WP_270149185.1 | phage tail tape measure protein | - |
| M2J80_RS01325 (M2J80_01320) | 304447..304569 | - | 123 | WP_161891571.1 | GpE family phage tail protein | - |
| M2J80_RS01330 (M2J80_01325) | 304578..304877 | - | 300 | WP_232892282.1 | phage tail assembly protein | - |
| M2J80_RS01335 (M2J80_01330) | 304902..305417 | - | 516 | WP_161891573.1 | phage major tail tube protein | - |
| M2J80_RS01340 (M2J80_01335) | 305432..306604 | - | 1173 | WP_232892281.1 | phage tail sheath protein | - |
| M2J80_RS01345 (M2J80_01340) | 306712..307425 | - | 714 | WP_270149194.1 | tail fiber assembly protein | - |
| M2J80_RS01350 (M2J80_01345) | 307433..307969 | - | 537 | WP_225786104.1 | phage tail protein | - |
| M2J80_RS01355 (M2J80_01350) | 310499..311296 | - | 798 | Protein_260 | phage tail protein | - |
| M2J80_RS01360 (M2J80_01355) | 311289..311900 | - | 612 | WP_161891576.1 | phage tail protein I | - |
| M2J80_RS01365 (M2J80_01360) | 311897..312811 | - | 915 | WP_232892279.1 | baseplate J/gp47 family protein | - |
| M2J80_RS01370 (M2J80_01365) | 312808..313152 | - | 345 | WP_161891578.1 | GPW/gp25 family protein | - |
| M2J80_RS01375 (M2J80_01370) | 313149..313688 | - | 540 | WP_232892297.1 | phage baseplate assembly protein V | - |
| M2J80_RS01380 (M2J80_01375) | 313750..314205 | - | 456 | WP_161891579.1 | phage virion morphogenesis protein | - |
| M2J80_RS01385 (M2J80_01380) | 314198..314731 | - | 534 | WP_161891580.1 | phage tail protein | - |
| M2J80_RS01390 (M2J80_01385) | 314715..314981 | - | 267 | WP_232892278.1 | Rz1-like lysis system protein LysC | - |
| M2J80_RS01395 (M2J80_01390) | 314869..315270 | - | 402 | Protein_268 | LysB family phage lysis regulatory protein | - |
| M2J80_RS01400 (M2J80_01395) | 315270..316103 | - | 834 | WP_161891582.1 | N-acetylmuramidase family protein | - |
| M2J80_RS01405 (M2J80_01400) | 316100..316417 | - | 318 | WP_232892277.1 | phage holin, lambda family | - |
| M2J80_RS01410 (M2J80_01405) | 316454..316666 | - | 213 | WP_232892276.1 | tail protein X | - |
| M2J80_RS01415 (M2J80_01410) | 316666..317142 | - | 477 | WP_232892275.1 | head completion/stabilization protein | - |
| M2J80_RS01420 (M2J80_01415) | 317240..317941 | - | 702 | WP_232892274.1 | phage terminase small subunit | - |
| M2J80_RS01425 (M2J80_01420) | 317945..318955 | - | 1011 | WP_232892273.1 | phage major capsid protein, P2 family | - |
| M2J80_RS01430 (M2J80_01425) | 318995..319843 | - | 849 | WP_232892272.1 | GPO family capsid scaffolding protein | - |
| M2J80_RS01435 (M2J80_01430) | 319996..321747 | + | 1752 | WP_232892271.1 | terminase ATPase subunit family protein | - |
| M2J80_RS01440 (M2J80_01435) | 321747..322790 | + | 1044 | WP_232892270.1 | phage portal protein | - |
| M2J80_RS01445 (M2J80_01440) | 322849..323490 | - | 642 | WP_232892269.1 | hypothetical protein | - |
| M2J80_RS01450 (M2J80_01445) | 323491..324471 | - | 981 | WP_232892268.1 | ImmA/IrrE family metallo-endopeptidase | - |
| M2J80_RS01460 (M2J80_01455) | 325489..325737 | - | 249 | WP_009682865.1 | hypothetical protein | - |
| M2J80_RS01465 (M2J80_01460) | 326238..326513 | + | 276 | WP_161891595.1 | DUF3077 domain-containing protein | - |
| M2J80_RS01470 (M2J80_01465) | 326744..327949 | - | 1206 | WP_110678167.1 | methyltransferase | - |
| M2J80_RS01475 (M2J80_01470) | 328078..328767 | - | 690 | WP_161891596.1 | ABC transporter permease | - |
| M2J80_RS01480 (M2J80_01475) | 328767..329459 | - | 693 | WP_270149252.1 | ABC transporter permease | - |
| M2J80_RS01485 (M2J80_01480) | 329514..330266 | - | 753 | WP_110678165.1 | ABC transporter substrate-binding protein | - |
| M2J80_RS01490 (M2J80_01485) | 330278..331051 | - | 774 | WP_009682872.1 | Octopine permease ATP-binding protein P | VF |
| M2J80_RS01495 (M2J80_01490) | 331693..333078 | + | 1386 | WP_029887657.1 | GABA permease | - |
| M2J80_RS01500 (M2J80_01495) | 333356..333796 | - | 441 | WP_009682874.1 | hypothetical protein | - |
| M2J80_RS01505 (M2J80_01500) | 334011..334253 | + | 243 | WP_255326884.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M2J80_RS01510 (M2J80_01505) | 334263..334565 | + | 303 | WP_029887656.1 | putative addiction module antidote protein | Antitoxin Detail |
| M2J80_RS01520 (M2J80_01515) | 334867..335139 | - | 273 | WP_009682876.1 | oxidative damage protection protein | - |
| M2J80_RS01525 (M2J80_01520) | 335139..336203 | - | 1065 | WP_009682877.1 | A/G-specific adenine glycosylase | - |
| M2J80_RS01530 (M2J80_01525) | 336200..338446 | - | 2247 | WP_161891597.1 | AsmA family protein | - |
| M2J80_RS01535 (M2J80_01530) | 338699..340360 | + | 1662 | WP_047150101.1 | OFA family MFS transporter | - |
| M2J80_RS01540 (M2J80_01535) | 340976..341569 | + | 594 | WP_009682881.1 | imidazoleglycerol-phosphate dehydratase HisB | - |
| M2J80_RS01545 (M2J80_01540) | 341570..342208 | + | 639 | WP_009682882.1 | imidazole glycerol phosphate synthase subunit HisH | - |
| M2J80_RS01550 (M2J80_01545) | 342209..342469 | + | 261 | WP_009682883.1 | DUF2164 domain-containing protein | - |
| M2J80_RS01555 (M2J80_01550) | 342584..343315 | + | 732 | WP_009682884.1 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | - |
| M2J80_RS01560 (M2J80_01555) | 343425..344195 | + | 771 | WP_029886410.1 | imidazole glycerol phosphate synthase subunit HisF | - |
| M2J80_RS01565 (M2J80_01560) | 344299..345477 | - | 1179 | WP_009682886.1 | choline ABC transporter ATP-binding protein | - |
| M2J80_RS01570 (M2J80_01565) | 345474..346322 | - | 849 | WP_172828412.1 | choline ABC transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|