MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 156521 bp
Accession: NZ_CP096976 Location: 809836..966356 Organism: Escherichia coli strain 17-07187 Replicon: chromosome
Accession: NZ_CP096976 Location: 809836..966356 Organism: Escherichia coli strain 17-07187 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M2894_RS03900 (805822) | 805822..807255 | + | 1434 | WP_000869178.1 | bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE | - |
| M2894_RS03905 (807375) | 807375..807434 | - | 60 | WP_001387082.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (807335) | 807335..807476 | + | 142 | NuclAT_6 | - | - |
| - (807335) | 807335..807476 | + | 142 | NuclAT_6 | - | - |
| - (807335) | 807335..807476 | + | 142 | NuclAT_6 | - | - |
| - (807335) | 807335..807476 | + | 142 | NuclAT_6 | - | - |
| M2894_RS03910 (807751) | 807751..807810 | - | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - (807711) | 807711..807852 | + | 142 | NuclAT_1 | - | - |
| - (807711) | 807711..807852 | + | 142 | NuclAT_1 | - | - |
| - (807711) | 807711..807852 | + | 142 | NuclAT_1 | - | - |
| - (807711) | 807711..807852 | + | 142 | NuclAT_1 | - | - |
| - (807711) | 807711..807852 | + | 142 | NuclAT_7 | - | - |
| - (807711) | 807711..807852 | + | 142 | NuclAT_7 | - | - |
| - (807711) | 807711..807852 | + | 142 | NuclAT_7 | - | - |
| - (807711) | 807711..807852 | + | 142 | NuclAT_7 | - | - |
| M2894_RS03915 (808049) | 808049..809710 | - | 1662 | WP_000341046.1 | flotillin family protein | - |
| M2894_RS03920 (809737) | 809737..810366 | - | 630 | WP_000599947.1 | DUF1449 family protein | - |
| M2894_RS03925 (810635) | 810635..810835 | + | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| M2894_RS03930 (810878) | 810878..811942 | - | 1065 | WP_001269793.1 | fimbrial protein | - |
| M2894_RS03935 (811944) | 811944..812693 | - | 750 | WP_001387080.1 | Chaperone protein PapD | VF |
| M2894_RS03940 (812709) | 812709..815213 | - | 2505 | WP_000277116.1 | Outer membrane usher protein PapC | VF |
| M2894_RS03945 (815273) | 815273..815824 | - | 552 | WP_001272149.1 | putative fimbrial-like protein YbgD | VF |
| M2894_RS03950 (816107) | 816107..816397 | - | 291 | WP_001297598.1 | IS1182 family transposase ISBusp4 | Transposase |
| M2894_RS03955 (816771) | 816771..817424 | + | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| M2894_RS03960 (817685) | 817685..817855 | + | 171 | WP_000469266.1 | protein YqiD | - |
| M2894_RS03965 (817913) | 817913..818686 | - | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| M2894_RS03970 (818829) | 818829..819617 | + | 789 | WP_001299419.1 | 4,5-DOPA dioxygenase extradiol | - |
| M2894_RS03975 (819655) | 819655..820815 | - | 1161 | WP_000442859.1 | glutathionylspermidine synthase family protein | - |
| M2894_RS03980 (820821) | 820821..821492 | - | 672 | WP_000831543.1 | DUF1190 family protein | - |
| M2894_RS03985 (821640) | 821640..823121 | - | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| M2894_RS03990 (823326) | 823326..823955 | + | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| M2894_RS03995 (823956) | 823956..824378 | + | 423 | WP_000833393.1 | DUF1249 family protein | - |
| M2894_RS04000 (824403) | 824403..825230 | + | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| M2894_RS04005 (825230) | 825230..825811 | + | 582 | WP_000105733.1 | esterase YqiA | - |
| M2894_RS04010 (825840) | 825840..827732 | + | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| M2894_RS04015 (827780) | 827780..828094 | - | 315 | WP_000958598.1 | putative quinol monooxygenase | - |
| M2894_RS04020 (828125) | 828125..828706 | - | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| M2894_RS04025 (829025) | 829025..829357 | + | 333 | WP_000912120.1 | DUF2645 family protein | - |
| M2894_RS04030 (829403) | 829403..830752 | - | 1350 | WP_000673354.1 | quorum sensing histidine kinase QseC | - |
| M2894_RS04035 (830749) | 830749..831408 | - | 660 | WP_001221502.1 | Transcriptional regulatory protein QseB | VF |
| M2894_RS04040 (831560) | 831560..831952 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| M2894_RS04045 (832005) | 832005..832487 | + | 483 | WP_000183494.1 | GyrI-like domain-containing protein | - |
| M2894_RS04050 (833033) | 833033..835291 | + | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| M2894_RS04055 (835524) | 835524..836261 | + | 738 | WP_000965703.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| M2894_RS04060 (836336) | 836336..837748 | + | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| M2894_RS04065 (837859) | 837859..840078 | + | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| M2894_RS04070 (840121) | 840121..840378 | - | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| M2894_RS04075 (840429) | 840429..841355 | - | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| M2894_RS04080 (841555) | 841555..842382 | - | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| M2894_RS04085 (842487) | 842487..843650 | - | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| M2894_RS04090 (843844) | 843844..844743 | + | 900 | WP_024174618.1 | DNA-binding transcriptional regulator YqhC | - |
| M2894_RS04095 (844783) | 844783..845442 | - | 660 | WP_000268419.1 | DedA family general envelope maintenance protein YghB | - |
| M2894_RS04100 (845582) | 845582..846769 | - | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| M2894_RS04105 (847021) | 847021..847755 | + | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| M2894_RS04110 (847762) | 847762..848187 | + | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| M2894_RS04115 (848226) | 848226..849110 | - | 885 | WP_000018758.1 | putative oxidoreductase YghA | VF |
| M2894_RS04120 (849301) | 849301..849795 | + | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| M2894_RS04125 (849835) | 849835..850875 | - | 1041 | WP_000262151.1 | L-glyceraldehyde 3-phosphate reductase | - |
| M2894_RS04130 (851032) | 851032..851919 | + | 888 | WP_001297303.1 | YghX family hydrolase | - |
| M2894_RS04135 (852038) | 852038..852325 | + | 288 | WP_001059136.1 | DUF2623 family protein YghW | - |
| M2894_RS04140 (852514) | 852514..853632 | + | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| M2894_RS04145 (853635) | 853635..854621 | + | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| M2894_RS04150 (854611) | 854611..855789 | + | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| M2894_RS04155 (855786) | 855786..857489 | + | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| M2894_RS04160 (857489) | 857489..857983 | + | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| M2894_RS04165 (857976) | 857976..858464 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| M2894_RS04170 (858457) | 858457..858798 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| M2894_RS04175 (858811) | 858811..859059 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| M2894_RS04180 (859181) | 859181..860162 | - | 982 | Protein_816 | IS110 family transposase IS621 | Transposase |
| M2894_RS04185 (860462) | 860462..861328 | - | 867 | WP_001387074.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| M2894_RS04190 (861533) | 861533..863392 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| M2894_RS04195 (863684) | 863684..865183 | + | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| M2894_RS04200 (865232) | 865232..865924 | - | 693 | WP_001190780.1 | dTMP kinase | - |
| M2894_RS04205 (866098) | 866098..866811 | + | 714 | WP_001076097.1 | dTMP kinase | - |
| M2894_RS04210 (866843) | 866843..867601 | + | 759 | WP_000339532.1 | hypothetical protein | - |
| M2894_RS04215 (867647) | 867647..868996 | + | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| M2894_RS04220 (868996) | 868996..869820 | + | 825 | WP_000984978.1 | hypothetical protein | - |
| M2894_RS04225 (869832) | 869832..870392 | + | 561 | WP_001299422.1 | YtfJ family protein | - |
| M2894_RS04230 (870423) | 870423..871493 | + | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| M2894_RS04235 (871490) | 871490..872569 | + | 1080 | WP_001387073.1 | LPS export ABC transporter permease LptG | - |
| M2894_RS04240 (872604) | 872604..873776 | - | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| M2894_RS04245 (873776) | 873776..874024 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| M2894_RS04250 (874056) | 874056..874970 | - | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| M2894_RS04255 (874967) | 874967..876688 | - | 1722 | WP_001390306.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| M2894_RS04260 (877059) | 877059..878201 | + | 1143 | WP_000388786.1 | protein YghO | - |
| M2894_RS04265 (878208) | 878208..878972 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| M2894_RS04270 (879223) | 879223..880722 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| M2894_RS04275 (880722) | 880722..881774 | + | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| M2894_RS04280 (881785) | 881785..883008 | + | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| M2894_RS04285 (883013) | 883013..883417 | + | 405 | WP_000853256.1 | GlcG family protein | - |
| M2894_RS04290 (883439) | 883439..885610 | + | 2172 | WP_000084080.1 | malate synthase G | - |
| M2894_RS04295 (885966) | 885966..887648 | + | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| M2894_RS04300 (888134) | 888134..892699 | + | 4566 | WP_001034494.1 | hypothetical protein | VF |
| M2894_RS04305 (892839) | 892839..893648 | + | 810 | WP_001365924.1 | Prepilin peptidase PppA | VF |
| M2894_RS04310 (893714) | 893714..894124 | + | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| M2894_RS04315 (894142) | 894142..895101 | + | 960 | WP_000135063.1 | Type II secretion system protein C 2 | VF |
| M2894_RS04320 (895131) | 895131..897191 | + | 2061 | WP_000498829.1 | Secretin GspD 2 | VF |
| M2894_RS04325 (897191) | 897191..898684 | + | 1494 | WP_000249348.1 | Type II secretion system protein E | VF |
| M2894_RS04330 (898684) | 898684..899907 | + | 1224 | WP_001173453.1 | Type II secretion system protein F | VF |
| M2894_RS04335 (899924) | 899924..900379 | + | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| M2894_RS04340 (900383) | 900383..900946 | + | 564 | WP_001115140.1 | Type II secretion system protein H | VF |
| M2894_RS04345 (900943) | 900943..901314 | + | 372 | WP_000820125.1 | hypothetical protein | VF |
| M2894_RS04350 (901311) | 901311..901910 | + | 600 | WP_001255040.1 | Type II secretion system protein J | VF |
| M2894_RS04355 (901913) | 901913..902890 | + | 978 | WP_000633238.1 | Putative type II secretion system protein K | VF |
| M2894_RS04360 (902887) | 902887..904065 | + | 1179 | WP_000094962.1 | hypothetical protein | VF |
| M2894_RS04365 (904067) | 904067..904603 | + | 537 | WP_000942795.1 | Type II secretion system protein M | VF |
| M2894_RS04370 (904884) | 904884..905726 | - | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| M2894_RS04375 (905811) | 905811..906008 | - | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| M2894_RS04380 (906036) | 906036..906233 | - | 198 | Protein_856 | DUF5983 family protein | - |
| M2894_RS04385 (906230) | 906230..906607 | - | 378 | WP_001094429.1 | TA system toxin CbtA family protein | Toxin Detail |
| M2894_RS04390 (906654) | 906654..907031 | - | 378 | WP_001285616.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M2894_RS04395 (907111) | 907111..907332 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| M2894_RS04400 (907419) | 907419..907895 | - | 477 | WP_001388380.1 | RadC family protein | - |
| M2894_RS04405 (907911) | 907911..908384 | - | 474 | WP_000855081.1 | antirestriction protein | - |
| M2894_RS04410 (908686) | 908686..909504 | - | 819 | WP_001234603.1 | DUF932 domain-containing protein | - |
| M2894_RS04415 (909604) | 909604..909837 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| M2894_RS04420 (909916) | 909916..910371 | - | 456 | WP_000581502.1 | IrmA family protein | - |
| M2894_RS04425 (910447) | 910447..912963 | - | 2517 | WP_001387066.1 | membrane protein | - |
| M2894_RS04430 (913084) | 913084..916203 | - | 3120 | WP_000820379.1 | autotransporter adhesin Ag43 | - |
| M2894_RS04435 (916537) | 916537..917409 | - | 873 | WP_001069724.1 | GTPase family protein | - |
| M2894_RS04440 (917519) | 917519..918538 | - | 1020 | WP_001388379.1 | hypothetical protein | - |
| M2894_RS04445 (919717) | 919717..919824 | - | 108 | Protein_869 | IS1 family transposase | - |
| M2894_RS04450 (920033) | 920033..920605 | - | 573 | WP_001170560.1 | hypothetical protein | - |
| M2894_RS04455 (920691) | 920691..920897 | - | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| M2894_RS04460 (921596) | 921596..921808 | + | 213 | WP_000453331.1 | hemolysin expression modulator Hha | - |
| M2894_RS04465 (922048) | 922048..922221 | - | 174 | WP_001387062.1 | hypothetical protein | - |
| M2894_RS04470 (922425) | 922425..922994 | + | 570 | WP_000220727.1 | inovirus Gp2 family protein | - |
| M2894_RS04475 (923032) | 923032..923190 | + | 159 | WP_000493525.1 | hypothetical protein | - |
| M2894_RS04480 (923162) | 923162..923545 | + | 384 | WP_000271022.1 | putative zinc ribbon protein | - |
| M2894_RS04485 (923542) | 923542..923954 | + | 413 | Protein_877 | putative zinc ribbon protein | - |
| M2894_RS04490 (923960) | 923960..924142 | + | 183 | WP_001216313.1 | hypothetical protein | - |
| M2894_RS04495 (924263) | 924263..924886 | + | 624 | WP_001260266.1 | hypothetical protein | - |
| M2894_RS04500 (924982) | 924982..925215 | + | 234 | WP_000124181.1 | hypothetical protein | - |
| M2894_RS04505 (925268) | 925268..925459 | - | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| M2894_RS04510 (925966) | 925966..926463 | + | 498 | WP_000098939.1 | hypothetical protein | VF |
| M2894_RS04515 (926485) | 926485..927846 | + | 1362 | WP_000930193.1 | hypothetical protein | VF |
| M2894_RS04520 (927948) | 927948..929192 | + | 1245 | WP_000897032.1 | GIY-YIG nuclease family protein | - |
| M2894_RS04525 (929428) | 929428..931173 | + | 1746 | WP_001390303.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| M2894_RS04530 (931238) | 931238..931543 | + | 306 | WP_001420595.1 | hypothetical protein | - |
| M2894_RS04535 (931658) | 931658..931825 | + | 168 | Protein_887 | transcriptional regulator | - |
| M2894_RS04540 (931904) | 931904..932173 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| M2894_RS04545 (932194) | 932194..932838 | + | 645 | WP_001387055.1 | hypothetical protein | - |
| M2894_RS04550 (932904) | 932904..933227 | + | 324 | WP_001387054.1 | hypothetical protein | - |
| M2894_RS04555 (933258) | 933258..933837 | - | 580 | Protein_891 | integrase core domain-containing protein | - |
| M2894_RS04560 (933833) | 933833..934515 | + | 683 | Protein_892 | hypothetical protein | - |
| M2894_RS04565 (934542) | 934542..935558 | - | 1017 | Protein_893 | IS630 family transposase | - |
| M2894_RS04570 (935953) | 935953..936429 | + | 477 | WP_000072549.1 | hypothetical protein | VF |
| M2894_RS04575 (936432) | 936432..937910 | + | 1479 | WP_000215053.1 | hypothetical protein | VF |
| M2894_RS04580 (937920) | 937920..938426 | + | 507 | WP_000233190.1 | type VI secretion system protein AaiC/Hcp2 | - |
| M2894_RS04585 (938436) | 938436..938858 | + | 423 | WP_000555547.1 | hypothetical protein | - |
| M2894_RS04590 (938851) | 938851..940653 | + | 1803 | WP_001390300.1 | type VI secretion system baseplate subunit TssF | - |
| M2894_RS04595 (940644) | 940644..941576 | + | 933 | WP_001173975.1 | type VI secretion system baseplate subunit TssG | - |
| M2894_RS04600 (941589) | 941589..943571 | + | 1983 | WP_000198270.1 | type VI secretion system tip protein TssI/VgrG | - |
| M2894_RS04605 (943582) | 943582..944049 | + | 468 | WP_000005080.1 | hypothetical protein | - |
| M2894_RS04610 (944059) | 944059..944358 | + | 300 | WP_001390299.1 | PAAR domain-containing protein | - |
| M2894_RS04615 (944362) | 944362..945438 | + | 1077 | WP_001033155.1 | hypothetical protein | VF |
| M2894_RS04620 (945446) | 945446..945997 | + | 552 | WP_170903195.1 | type VI secretion lipoprotein TssJ | - |
| M2894_RS04625 (946016) | 946016..947428 | + | 1413 | WP_001154665.1 | type VI secretion system baseplate subunit TssK | - |
| M2894_RS04630 (947767) | 947767..948357 | + | 591 | WP_001028113.1 | hypothetical protein | VF |
| M2894_RS04635 (948363) | 948363..951767 | + | 3405 | WP_000914956.1 | type VI secretion protein IcmF/TssM N-terminal domain-containing protein | - |
| M2894_RS04640 (951771) | 951771..954320 | + | 2550 | WP_000029846.1 | Protein ClpV1 | VF |
| M2894_RS04645 (954517) | 954517..955254 | + | 738 | Protein_909 | IS3 family transposase IS1203 | Transposase |
| M2894_RS04650 (955929) | 955929..957439 | + | 1511 | Protein_910 | group II intron reverse transcriptase/maturase | - |
| M2894_RS04655 (957523) | 957523..958002 | + | 480 | Protein_911 | IS3 family transposase IS629 | Transposase |
| M2894_RS04660 (958395) | 958395..958588 | + | 194 | Protein_912 | hypothetical protein | - |
| M2894_RS04665 (959760) | 959760..960326 | + | 567 | WP_000587872.1 | hypothetical protein | - |
| M2894_RS04670 (960391) | 960391..960671 | + | 281 | Protein_914 | transposase | - |
| M2894_RS04675 (960805) | 960805..961959 | + | 1155 | WP_000359994.1 | VasL domain-containing protein | - |
| M2894_RS04680 (962825) | 962825..962995 | - | 171 | Protein_916 | ATP-dependent helicase | - |
| M2894_RS04685 (963025) | 963025..963213 | - | 189 | Protein_917 | IS66 family transposase IS682 | Transposase |
| M2894_RS04690 (963274) | 963274..964305 | + | 1032 | Protein_918 | IS110 family transposase ISEc45 | Transposase |
| M2894_RS04695 (964390) | 964390..964956 | + | 567 | Protein_919 | IS3 family transposase | - |
| M2894_RS04700 (965142) | 965142..966755 | - | 1614 | WP_000080172.1 | IS66-like element ISEc43 family transposase | - |
| M2894_RS04705 (966786) | 966786..967136 | - | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| M2894_RS04710 (967084) | 967084..967566 | - | 483 | WP_248910686.1 | transposase | - |
| M2894_RS04715 (967654) | 967654..968106 | + | 453 | Protein_923 | transposase | - |
| M2894_RS04720 (968145) | 968145..968387 | + | 243 | Protein_924 | IS256 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|