MGE detailed information
MGE type: Genomic_island MGE length: 47034 bp
Accession: NZ_CP096902 Location: 3834612..3881645 Organism: Escherichia coli strain RSHH22 Replicon: chromosome
Accession: NZ_CP096902 Location: 3834612..3881645 Organism: Escherichia coli strain RSHH22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1Y13_RS18945 (3830166) | 3830166..3830753 | + | 588 | WP_001295527.1 | transcriptional regulator BetI | - |
| M1Y13_RS18950 (3830767) | 3830767..3832239 | + | 1473 | WP_242386731.1 | betaine-aldehyde dehydrogenase | - |
| M1Y13_RS18955 (3832253) | 3832253..3833923 | + | 1671 | WP_001159102.1 | choline dehydrogenase | - |
| M1Y13_RS18960 (3834619) | 3834619..3834752 | - | 134 | Protein_3722 | hypothetical protein | - |
| M1Y13_RS18965 (3834998) | 3834998..3835561 | + | 564 | WP_001295805.1 | hypothetical protein | VF |
| M1Y13_RS18970 (3835891) | 3835891..3836685 | + | 795 | WP_001315275.1 | LuxR family transcriptional regulator HyxR | - |
| M1Y13_RS18975 (3836682) | 3836682..3836822 | + | 141 | WP_001406335.1 | hypothetical protein | - |
| M1Y13_RS18980 (3836839) | 3836839..3837600 | + | 762 | WP_001406334.1 | protein HyxA | - |
| M1Y13_RS18985 (3837642) | 3837642..3839939 | + | 2298 | WP_000798060.1 | outer membrane autotransporter HyxB | - |
| M1Y13_RS18990 (3840123) | 3840123..3840788 | + | 666 | WP_001209104.1 | protein YkgH | - |
| M1Y13_RS18995 (3841034) | 3841034..3841729 | - | 696 | WP_000370311.1 | lactate utilization protein C | - |
| M1Y13_RS19000 (3841722) | 3841722..3843149 | - | 1428 | WP_000023907.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| M1Y13_RS19005 (3843160) | 3843160..3843879 | - | 720 | WP_129541719.1 | (Fe-S)-binding protein | - |
| M1Y13_RS19010 (3844405) | 3844405..3845259 | - | 855 | WP_000339583.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| M1Y13_RS19015 (3845485) | 3845485..3846810 | + | 1326 | WP_001046293.1 | reactive chlorine resistance oxidoreductase RclA | - |
| M1Y13_RS19020 (3846919) | 3846919..3847155 | + | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| M1Y13_RS19025 (3847167) | 3847167..3847760 | + | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| M1Y13_RS19030 (3847920) | 3847920..3848789 | - | 870 | WP_001299025.1 | aldo/keto reductase | - |
| M1Y13_RS19035 (3849038) | 3849038..3849895 | + | 858 | WP_000621018.1 | hypothetical protein | VF |
| M1Y13_RS19040 (3850016) | 3850016..3854269 | - | 4254 | WP_000092611.1 | hypothetical protein | VF |
| M1Y13_RS19045 (3854822) | 3854822..3854911 | + | 90 | Protein_3739 | hypothetical protein | - |
| M1Y13_RS19050 (3855385) | 3855385..3855486 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| M1Y13_RS19055 (3855849) | 3855849..3856112 | + | 264 | WP_000803999.1 | type B 50S ribosomal protein L31 | - |
| M1Y13_RS19060 (3856112) | 3856112..3856252 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| M1Y13_RS19065 (3856287) | 3856287..3856514 | - | 228 | WP_001147277.1 | protein YkgL | - |
| M1Y13_RS19070 (3857337) | 3857337..3857879 | + | 543 | WP_001296902.1 | hypothetical protein | VF |
| M1Y13_RS19075 (3857954) | 3857954..3858541 | + | 588 | WP_000730974.1 | hypothetical protein | VF |
| M1Y13_RS19080 (3858599) | 3858599..3859267 | + | 669 | WP_000716392.1 | hypothetical protein | VF |
| M1Y13_RS19085 (3859293) | 3859293..3861818 | + | 2526 | WP_001131077.1 | hypothetical protein | VF |
| M1Y13_RS19090 (3861808) | 3861808..3863451 | + | 1644 | WP_001323478.1 | hypothetical protein | VF |
| M1Y13_RS19095 (3863420) | 3863420..3864130 | + | 711 | WP_001305432.1 | hypothetical protein | VF |
| M1Y13_RS19100 (3864443) | 3864443..3864772 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| M1Y13_RS19105 (3865020) | 3865020..3865634 | - | 615 | WP_001019920.1 | YagU family protein | - |
| M1Y13_RS19110 (3866052) | 3866052..3866741 | + | 690 | WP_000070694.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| M1Y13_RS19115 (3866738) | 3866738..3867694 | + | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| M1Y13_RS19120 (3867691) | 3867691..3869889 | + | 2199 | WP_000667065.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| M1Y13_RS19125 (3869900) | 3869900..3870856 | + | 957 | WP_000121356.1 | molybdenum cofactor insertion chaperone PaoD | - |
| M1Y13_RS19130 (3870907) | 3870907..3871245 | + | 339 | Protein_3756 | LysR substrate-binding domain-containing protein | - |
| M1Y13_RS19135 (3871583) | 3871583..3872902 | + | 1320 | WP_000144688.1 | hypothetical protein ; Integrase | Integrase |
| M1Y13_RS19140 (3872995) | 3872995..3873843 | - | 849 | WP_129541718.1 | DUF4942 domain-containing protein | - |
| M1Y13_RS19145 (3873940) | 3873940..3874137 | - | 198 | WP_000772024.1 | DUF957 domain-containing protein | - |
| M1Y13_RS19150 (3874157) | 3874157..3874645 | - | 489 | WP_032215286.1 | DUF5983 family protein | - |
| M1Y13_RS19155 (3874642) | 3874642..3875019 | - | 378 | WP_079399123.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| M1Y13_RS19160 (3875108) | 3875108..3875476 | - | 369 | WP_129541717.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M1Y13_RS19165 (3875556) | 3875556..3875777 | - | 222 | WP_129541716.1 | DUF987 domain-containing protein | - |
| M1Y13_RS19170 (3875840) | 3875840..3876316 | - | 477 | WP_001186726.1 | RadC family protein | - |
| M1Y13_RS19175 (3876332) | 3876332..3876817 | - | 486 | WP_000849574.1 | antirestriction protein | - |
| M1Y13_RS19180 (3876908) | 3876908..3877690 | - | 783 | WP_129541715.1 | DUF932 domain-containing protein | - |
| M1Y13_RS19185 (3877790) | 3877790..3878023 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| M1Y13_RS19190 (3878102) | 3878102..3878557 | - | 456 | WP_000581502.1 | IrmA family protein | - |
| M1Y13_RS19195 (3878633) | 3878633..3880204 | - | 1572 | Protein_3769 | hypothetical protein | - |
| M1Y13_RS19200 (3880308) | 3880308..3881645 | - | 1338 | WP_115425395.1 | group II intron reverse transcriptase/maturase | - |
| M1Y13_RS19205 (3882210) | 3882210..3882476 | - | 267 | Protein_3771 | hypothetical protein | - |
| M1Y13_RS19210 (3882507) | 3882507..3884120 | - | 1614 | WP_000080195.1 | IS66-like element ISEc23 family transposase | - |
| M1Y13_RS19215 (3884151) | 3884151..3884501 | - | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| M1Y13_RS19220 (3884498) | 3884498..3884923 | - | 426 | WP_000422741.1 | transposase | - |
| M1Y13_RS19225 (3885008) | 3885008..3885697 | - | 690 | Protein_3775 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|