MGE detailed information
MGE type: Genomic_island MGE length: 49305 bp
Accession: NZ_CP096821 Location: 1714585..1763889 Organism: Pectobacterium sp. 21LCBS03 Replicon: chromosome
Accession: NZ_CP096821 Location: 1714585..1763889 Organism: Pectobacterium sp. 21LCBS03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYB54_RS07615 (MYB54_07615) | 1710068..1711900 | + | 1833 | WP_010279371.1 | excinuclease ABC subunit UvrC | - |
| MYB54_RS07620 (MYB54_07620) | 1711959..1712507 | + | 549 | WP_039285745.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| MYB54_RS07640 (MYB54_07640) | 1713146..1714408 | + | 1263 | WP_248721755.1 | integrase arm-type DNA-binding domain-containing protein | - |
| MYB54_RS07645 (MYB54_07645) | 1714585..1715091 | - | 507 | WP_248721756.1 | hypothetical protein | - |
| MYB54_RS07650 (MYB54_07650) | 1715172..1718042 | - | 2871 | WP_248721757.1 | DEAD/DEAH box helicase family protein | - |
| MYB54_RS07655 (MYB54_07655) | 1718039..1719808 | - | 1770 | WP_248721758.1 | site-specific DNA-methyltransferase | - |
| MYB54_RS07660 (MYB54_07660) | 1719818..1722205 | - | 2388 | WP_248721759.1 | S8 family peptidase | - |
| MYB54_RS07665 (MYB54_07665) | 1722215..1723195 | - | 981 | WP_248721760.1 | ATP-binding protein | - |
| MYB54_RS07670 (MYB54_07670) | 1723221..1726070 | - | 2850 | WP_248721761.1 | SNF2-related protein | - |
| MYB54_RS07675 (MYB54_07675) | 1726273..1726860 | - | 588 | WP_248721762.1 | hypothetical protein | - |
| MYB54_RS07680 (MYB54_07680) | 1726857..1727525 | - | 669 | WP_248721763.1 | hypothetical protein | - |
| MYB54_RS07685 (MYB54_07685) | 1727995..1728909 | - | 915 | WP_248721764.1 | hypothetical protein | - |
| MYB54_RS07690 (MYB54_07690) | 1728962..1732249 | - | 3288 | WP_248721765.1 | ATP-binding protein | - |
| MYB54_RS07695 (MYB54_07695) | 1732428..1733303 | - | 876 | WP_248721959.1 | HNH endonuclease | - |
| MYB54_RS07700 (MYB54_07700) | 1733392..1733937 | - | 546 | WP_248721766.1 | LuxR C-terminal-related transcriptional regulator | - |
| MYB54_RS07705 (MYB54_07705) | 1733987..1734286 | - | 300 | WP_248721960.1 | hypothetical protein | VF |
| MYB54_RS07710 (MYB54_07710) | 1735094..1735441 | - | 348 | Protein_1493 | hypothetical protein | VF |
| MYB54_RS07715 (MYB54_07715) | 1735704..1736285 | - | 582 | WP_248721767.1 | hypothetical protein | - |
| MYB54_RS07720 (MYB54_07720) | 1736439..1736864 | - | 426 | WP_248721768.1 | zinc-ribbon domain-containing protein | - |
| MYB54_RS07725 (MYB54_07725) | 1736957..1737169 | - | 213 | WP_248721769.1 | AlpA family transcriptional regulator | - |
| MYB54_RS07730 (MYB54_07730) | 1737271..1737858 | - | 588 | WP_248721770.1 | inovirus-type Gp2 protein | - |
| MYB54_RS07735 (MYB54_07735) | 1738233..1738901 | + | 669 | WP_248721771.1 | hypothetical protein | - |
| MYB54_RS07740 (MYB54_07740) | 1738996..1739883 | + | 888 | WP_248721772.1 | 50S ribosome-binding GTPase | - |
| MYB54_RS07745 (MYB54_07745) | 1740067..1740225 | + | 159 | WP_155242703.1 | hypothetical protein | - |
| MYB54_RS07750 (MYB54_07750) | 1740372..1741205 | + | 834 | WP_248721773.1 | hypothetical protein | - |
| MYB54_RS07755 (MYB54_07755) | 1741262..1741612 | + | 351 | WP_116238250.1 | hypothetical protein | - |
| MYB54_RS07760 (MYB54_07760) | 1741735..1742208 | + | 474 | WP_248721774.1 | DNA repair protein RadC | - |
| MYB54_RS07765 (MYB54_07765) | 1742248..1742583 | + | 336 | WP_248721775.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| MYB54_RS07770 (MYB54_07770) | 1742653..1742973 | + | 321 | WP_039311757.1 | TA system toxin CbtA family protein | Toxin Detail |
| MYB54_RS07775 (MYB54_07775) | 1743091..1743924 | + | 834 | WP_248721776.1 | DUF4942 domain-containing protein | - |
| MYB54_RS07780 (MYB54_07780) | 1744018..1744248 | + | 231 | WP_248721777.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| MYB54_RS07785 (MYB54_07785) | 1744248..1744652 | + | 405 | WP_198339801.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| MYB54_RS07790 (MYB54_07790) | 1745131..1746144 | - | 1014 | WP_248721778.1 | CAR family subclass B3 metallo-beta-lactamase | - |
| MYB54_RS07795 (MYB54_07795) | 1746256..1747155 | + | 900 | WP_205563835.1 | HTH-type transcriptional regulator ArgP | VF |
| MYB54_RS07800 (MYB54_07800) | 1747210..1747566 | - | 357 | WP_052235227.1 | hypothetical protein | - |
| MYB54_RS07805 (MYB54_07805) | 1747791..1748009 | - | 219 | WP_010279476.1 | KTSC domain-containing protein | - |
| MYB54_RS07810 (MYB54_07810) | 1748285..1749700 | - | 1416 | WP_040033970.1 | diguanylate cyclase | - |
| MYB54_RS07815 (MYB54_07815) | 1749910..1750113 | + | 204 | WP_014915927.1 | protein DsrB | - |
| MYB54_RS07820 (MYB54_07820) | 1750270..1751991 | - | 1722 | WP_248721779.1 | hypothetical protein | VF |
| MYB54_RS07825 (MYB54_07825) | 1752271..1753233 | + | 963 | WP_165572422.1 | DMT family transporter | - |
| MYB54_RS07830 (MYB54_07830) | 1754053..1754403 | + | 351 | WP_014915924.1 | Flagellar transcriptional regulator FlhD | VF |
| MYB54_RS07835 (MYB54_07835) | 1754407..1754985 | + | 579 | WP_005970730.1 | Flagellar transcriptional regulator FlhC | VF |
| MYB54_RS07840 (MYB54_07840) | 1755120..1756007 | + | 888 | WP_014915923.1 | hypothetical protein | VF |
| MYB54_RS07845 (MYB54_07845) | 1756004..1757059 | + | 1056 | WP_014915922.1 | hypothetical protein | VF |
| MYB54_RS07850 (MYB54_07850) | 1757099..1759102 | + | 2004 | WP_205542181.1 | hypothetical protein | VF |
| MYB54_RS07855 (MYB54_07855) | 1759134..1759631 | + | 498 | WP_010279509.1 | hypothetical protein | VF |
| MYB54_RS07860 (MYB54_07860) | 1759767..1761452 | + | 1686 | WP_248721780.1 | hypothetical protein | VF |
| MYB54_RS07865 (MYB54_07865) | 1761965..1762837 | + | 873 | WP_014915918.1 | hypothetical protein | VF |
| MYB54_RS07870 (MYB54_07870) | 1762837..1763889 | + | 1053 | WP_039273419.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| MYB54_RS07875 (MYB54_07875) | 1763928..1764317 | + | 390 | WP_010279519.1 | chemotaxis response regulator CheY | - |
| MYB54_RS07880 (MYB54_07880) | 1764327..1764971 | + | 645 | WP_014915916.1 | protein phosphatase CheZ | - |
| MYB54_RS07885 (MYB54_07885) | 1765216..1766367 | + | 1152 | WP_248721781.1 | flagellar biosynthesis protein FlhB | - |
| MYB54_RS07890 (MYB54_07890) | 1766360..1768444 | + | 2085 | WP_039285772.1 | flagellar biosynthesis protein FlhA | - |
| MYB54_RS07895 (MYB54_07895) | 1768453..1768860 | + | 408 | WP_219606189.1 | flagellar protein FlhE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|