MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70300 bp
Accession: NZ_CP096669 Location: 1..70300 Organism: Yersinia pestis EV76-CN Replicon: plasmid unnamed2
Accession: NZ_CP096669 Location: 1..70300 Organism: Yersinia pestis EV76-CN Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M0M60_RS21995 | 294..497 | + | 204 | WP_284438441.1 | hypothetical protein | - |
| M0M60_RS21490 (M0M60_21465) | 499..765 | + | 267 | WP_002212945.1 | hypothetical protein | VF |
| M0M60_RS21495 (M0M60_21470) | 762..1547 | + | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| M0M60_RS21500 (M0M60_21475) | 1547..2609 | + | 1063 | Protein_4 | type III secretion system export apparatus switch protein YscU | - |
| M0M60_RS21505 (M0M60_21480) | 3185..3580 | + | 396 | WP_002222527.1 | Exoenzyme S synthesis protein B | VF |
| M0M60_RS21510 (M0M60_21485) | 3704..4519 | + | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| M0M60_RS21515 (M0M60_21490) | 4598..4696 | + | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| M0M60_RS21520 (M0M60_21495) | 4922..5335 | + | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| M0M60_RS21525 (M0M60_21500) | 5341..7164 | + | 1824 | WP_002212923.1 | Yop proteins translocation protein C | VF |
| M0M60_RS21530 (M0M60_21505) | 7161..8420 | + | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| M0M60_RS21535 (M0M60_21510) | 8417..8617 | + | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| M0M60_RS21540 (M0M60_21515) | 8618..8881 | + | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| M0M60_RS21545 (M0M60_21520) | 8883..9230 | + | 348 | WP_002229801.1 | Putative Yop proteins translocation protein G | VF |
| M0M60_RS21550 (M0M60_21525) | 9227..9724 | + | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| M0M60_RS21555 (M0M60_21530) | 9725..10072 | + | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| M0M60_RS21560 (M0M60_21535) | 10079..10813 | + | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| M0M60_RS21565 (M0M60_21540) | 10813..11442 | + | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| M0M60_RS21570 (M0M60_21545) | 11388..12053 | + | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| M0M60_RS21575 (M0M60_21550) | 12278..12625 | + | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| M0M60_RS21580 (M0M60_21555) | 13173..14202 | + | 1030 | Protein_20 | IS3 family transposase | - |
| M0M60_RS21585 (M0M60_21560) | 14221..14493 | + | 273 | Protein_21 | transposase | - |
| M0M60_RS21590 (M0M60_21565) | 14714..16120 | - | 1407 | WP_002213278.1 | Tyrosine-protein phosphatase YopH | VF |
| M0M60_RS21595 (M0M60_21570) | 16403..16636 | - | 234 | Protein_23 | transposase domain-containing protein | - |
| M0M60_RS21600 (M0M60_21575) | 16639..17217 | + | 579 | Protein_24 | IS3 family transposase ISYpe1 | Transposase |
| M0M60_RS21605 (M0M60_21580) | 17482..17586 | - | 105 | Protein_25 | GNAT family N-acetyltransferase | - |
| M0M60_RS21610 (M0M60_21585) | 17803..18669 | - | 867 | WP_002213287.1 | Effector protein YopJ | VF |
| M0M60_RS21615 (M0M60_21590) | 19065..21263 | - | 2199 | WP_002213290.1 | Protein kinase YpkA | VF |
| M0M60_RS21620 (M0M60_21595) | 21271..21720 | - | 450 | WP_002229809.1 | hypothetical protein | VF |
| M0M60_RS21625 (M0M60_21600) | 21976..22285 | - | 310 | Protein_29 | IS3 family transposase ISKpn37 | Transposase |
| M0M60_RS21630 (M0M60_21605) | 22294..22472 | - | 179 | Protein_30 | IS66 family insertion sequence element accessory protein TnpB | - |
| M0M60_RS21635 (M0M60_21610) | 22466..22705 | - | 240 | WP_002213291.1 | hypothetical protein | - |
| M0M60_RS21640 (M0M60_21615) | 23878..24756 | - | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| M0M60_RS21645 (M0M60_21620) | 24737..24811 | - | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| M0M60_RS21655 (M0M60_21630) | 25053..25307 | - | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| M0M60_RS21660 (M0M60_21635) | 25445..25693 | - | 249 | Protein_35 | Phospholipase D | VF |
| M0M60_RS21665 (M0M60_21640) | 25713..25893 | - | 181 | Protein_36 | Phospholipase D | VF |
| M0M60_RS21670 (M0M60_21645) | 25819..26127 | + | 309 | Protein_37 | DDE-type integrase/transposase/recombinase | - |
| M0M60_RS21675 (M0M60_21650) | 26122..26858 | - | 737 | Protein_38 | IS3 family transposase ISKpn37 | Transposase |
| M0M60_RS21680 (M0M60_21655) | 27030..27488 | - | 459 | WP_002213246.1 | hypothetical protein | - |
| M0M60_RS21685 (M0M60_21660) | 27557..27933 | + | 377 | Protein_40 | transposase | - |
| M0M60_RS21690 (M0M60_21665) | 27891..28007 | - | 117 | WP_002213250.1 | hypothetical protein | - |
| M0M60_RS21695 (M0M60_21670) | 28152..29252 | - | 1101 | WP_231847522.1 | Adhesin YadA | VF |
| M0M60_RS21700 (M0M60_21675) | 29204..29455 | - | 252 | WP_002356450.1 | Adhesin YadA | VF |
| M0M60_RS21705 (M0M60_21680) | 30067..30399 | + | 333 | Protein_44 | IS3 family transposase IS1351 | Transposase |
| M0M60_RS21710 (M0M60_21685) | 30438..32753 | - | 2316 | WP_002213256.1 | Tn3 family transposase ISEc63 | Transposase |
| M0M60_RS21715 (M0M60_21690) | 32917..33468 | + | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| M0M60_RS21720 (M0M60_21695) | 33487..33951 | + | 465 | WP_002224338.1 | hypothetical protein | - |
| M0M60_RS21725 (M0M60_21700) | 34090..34419 | + | 330 | WP_002229829.1 | hypothetical protein | - |
| M0M60_RS21730 (M0M60_21705) | 34519..35618 | + | 1100 | WP_086016640.1 | IS3 family transposase ISYpe1 | Transposase |
| M0M60_RS21735 (M0M60_21710) | 35766..36191 | - | 426 | WP_002213267.1 | hypothetical protein | VF |
| M0M60_RS21740 (M0M60_21715) | 36567..36965 | - | 399 | Protein_51 | IS21 family transposase IS21 | Transposase |
| M0M60_RS21745 (M0M60_21720) | 36965..37891 | - | 927 | Protein_52 | IS21 family transposase IS21 | Transposase |
| M0M60_RS21750 (M0M60_21725) | 37980..39002 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| M0M60_RS21755 (M0M60_21730) | 38999..39781 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| M0M60_RS21760 (M0M60_21735) | 39848..40096 | - | 249 | Protein_55 | IS21 family transposase IS21 | Transposase |
| M0M60_RS21765 (M0M60_21740) | 40199..40843 | + | 645 | Protein_56 | IS3 family transposase ISYen3 | Transposase |
| M0M60_RS21770 (M0M60_21745) | 40906..41298 | - | 393 | WP_002213403.1 | YopE regulator | VF |
| M0M60_RS21775 (M0M60_21750) | 41492..42151 | + | 660 | WP_002229754.1 | Outer membrane virulence protein YopE | VF |
| M0M60_RS21780 (M0M60_21755) | 42291..42590 | - | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M0M60_RS21785 (M0M60_21760) | 42583..42825 | - | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| M0M60_RS21790 (M0M60_21765) | 42991..43283 | - | 293 | Protein_61 | IS6 family transposase ISEas1 | Transposase |
| M0M60_RS21795 (M0M60_21770) | 43369..43542 | + | 174 | WP_002213357.1 | hypothetical protein | - |
| M0M60_RS21800 (M0M60_21775) | 43691..43927 | - | 237 | WP_154020274.1 | hypothetical protein | - |
| M0M60_RS21805 (M0M60_21780) | 44087..45052 | - | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| M0M60_RS21810 (M0M60_21785) | 45049..46215 | - | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| M0M60_RS21815 (M0M60_21790) | 46683..46896 | + | 214 | Protein_66 | IS481 family transposase | - |
| M0M60_RS21820 (M0M60_21795) | 46975..48120 | - | 1146 | Protein_67 | IS3 family transposase | - |
| M0M60_RS21825 (M0M60_21800) | 48227..48965 | - | 739 | Protein_68 | conjugal transfer complement resistance protein TraT | - |
| M0M60_RS21830 (M0M60_21810) | 49005..49295 | - | 291 | Protein_69 | IS3 family transposase | - |
| M0M60_RS21835 (M0M60_21815) | 49454..50002 | - | 549 | WP_002213007.1 | hypothetical protein | VF |
| M0M60_RS21840 (M0M60_21820) | 50502..51470 | + | 969 | WP_002213006.1 | Cysteine protease YopT | VF |
| M0M60_RS21845 (M0M60_21825) | 51470..51868 | + | 399 | WP_002213004.1 | Chaperone protein SycT | VF |
| M0M60_RS21850 (M0M60_21830) | 52274..52555 | + | 282 | Protein_73 | DDE-type integrase/transposase/recombinase | - |
| M0M60_RS21855 (M0M60_21835) | 52642..52992 | + | 351 | WP_002393889.1 | hypothetical protein | - |
| M0M60_RS21860 (M0M60_21840) | 53520..53738 | - | 219 | Protein_75 | DDE-type integrase/transposase/recombinase | - |
| M0M60_RS21865 (M0M60_21845) | 53868..54185 | + | 318 | Protein_76 | IS256 family transposase ISSod4 | Transposase |
| M0M60_RS21870 (M0M60_21850) | 54228..55457 | - | 1230 | WP_002229779.1 | Outer membrane protein YopM | VF |
| M0M60_RS21875 (M0M60_21855) | 55851..56060 | - | 210 | WP_002229781.1 | hypothetical protein | - |
| M0M60_RS21880 (M0M60_21860) | 56081..56718 | + | 638 | Protein_79 | IS6 family transposase | - |
| M0M60_RS21885 (M0M60_21865) | 57186..58106 | - | 921 | WP_002212987.1 | Protein YopD | VF |
| M0M60_RS21890 (M0M60_21870) | 58125..59330 | - | 1206 | WP_002212985.1 | Protein YopB | VF |
| M0M60_RS21895 (M0M60_21875) | 59308..59814 | - | 507 | WP_002222758.1 | Chaperone protein IpgC | VF |
| M0M60_RS21900 (M0M60_21880) | 59827..60807 | - | 981 | WP_002212981.1 | Virulence-associated V antigen | VF |
| M0M60_RS21905 (M0M60_21885) | 60809..61096 | - | 288 | WP_002212973.1 | hypothetical protein | VF |
| M0M60_RS21910 (M0M60_21890) | 61138..61578 | - | 441 | WP_002220918.1 | hypothetical protein | VF |
| M0M60_RS21915 (M0M60_21895) | 61575..63689 | - | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| M0M60_RS21920 (M0M60_21900) | 63676..64020 | - | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| M0M60_RS21925 (M0M60_21905) | 64017..64385 | - | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| M0M60_RS21930 (M0M60_21910) | 64382..64753 | - | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| M0M60_RS21935 (M0M60_21915) | 64740..65018 | - | 279 | WP_002212965.1 | Protein TyeA | VF |
| M0M60_RS21940 (M0M60_21920) | 64999..65880 | - | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| M0M60_RS21945 (M0M60_21925) | 66078..67397 | + | 1320 | WP_002212955.1 | putative ATP synthase YscN | VF |
| M0M60_RS21950 (M0M60_21930) | 67394..67858 | + | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| M0M60_RS21955 (M0M60_21935) | 67858..69225 | + | 1368 | WP_002212950.1 | hypothetical protein | VF |
| M0M60_RS21960 (M0M60_21940) | 69222..70145 | + | 924 | WP_002212948.1 | Yop proteins translocation protein Q | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|