MGE detailed information
MGE type: Prophage MGE length: 50804 bp
Accession: NZ_CP096540 Location: 898299..949102 Organism: Staphylococcus aureus strain RIVM_M044329 Replicon: chromosome
Accession: NZ_CP096540 Location: 898299..949102 Organism: Staphylococcus aureus strain RIVM_M044329 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F45_RS04370 (M1F45_04360) | 893348..894865 | + | 1518 | WP_001085505.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| M1F45_RS04375 (M1F45_04365) | 894995..896299 | + | 1305 | WP_001121760.1 | phosphopyruvate hydratase | - |
| M1F45_RS04380 (M1F45_04370) | 896638..897096 | + | 459 | WP_000785252.1 | hypothetical protein | - |
| M1F45_RS04385 (M1F45_04375) | 897163..897396 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| M1F45_RS04390 (M1F45_04380) | 897525..898265 | + | 741 | WP_001165970.1 | carboxylesterase | - |
| M1F45_RS04395 (M1F45_04385) | 898299..900671 | + | 2373 | WP_001050055.1 | ribonuclease R | - |
| M1F45_RS04400 (M1F45_04390) | 900693..901157 | + | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| M1F45_RS04410 (M1F45_04400) | 901669..902718 | - | 1050 | WP_021285879.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| M1F45_RS04415 (M1F45_04405) | 902780..903295 | - | 516 | WP_021285878.1 | hypothetical protein | - |
| M1F45_RS04420 (M1F45_04410) | 903299..903790 | - | 492 | WP_001573838.1 | hypothetical protein | - |
| M1F45_RS04425 (M1F45_04415) | 903811..904269 | - | 459 | WP_000521395.1 | hypothetical protein | - |
| M1F45_RS04430 (M1F45_04420) | 904291..904617 | - | 327 | WP_000455972.1 | helix-turn-helix transcriptional regulator | - |
| M1F45_RS04435 (M1F45_04425) | 904780..904989 | + | 210 | WP_001114715.1 | helix-turn-helix transcriptional regulator | - |
| M1F45_RS04440 (M1F45_04430) | 905028..905753 | + | 726 | WP_015978381.1 | phage repressor protein | - |
| M1F45_RS04445 (M1F45_04435) | 905778..905987 | + | 210 | WP_000455728.1 | hypothetical protein | - |
| M1F45_RS04450 (M1F45_04440) | 906000..906161 | + | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| M1F45_RS04455 (M1F45_04445) | 906253..906513 | + | 261 | WP_000291075.1 | hypothetical protein ; Integrase | Integrase |
| M1F45_RS04460 (M1F45_04450) | 906521..906757 | + | 237 | WP_000802315.1 | hypothetical protein | - |
| M1F45_RS04465 (M1F45_04455) | 906750..907229 | + | 480 | WP_000002513.1 | siphovirus Gp157 family protein | - |
| M1F45_RS04470 (M1F45_04460) | 907229..907867 | + | 639 | WP_021285877.1 | ERF family protein | - |
| M1F45_RS04475 (M1F45_04465) | 907867..908295 | + | 429 | WP_000934783.1 | single-stranded DNA-binding protein | - |
| M1F45_RS04480 (M1F45_04470) | 908309..908983 | + | 675 | WP_021285876.1 | putative HNHc nuclease | - |
| M1F45_RS04485 (M1F45_04475) | 908976..909731 | + | 756 | WP_001037657.1 | DnaD domain protein | - |
| M1F45_RS04490 (M1F45_04480) | 909731..910087 | + | 357 | WP_001132243.1 | hypothetical protein | - |
| M1F45_RS04495 (M1F45_04485) | 910084..911325 | + | 1242 | WP_001106166.1 | DnaB helicase C-terminal domain-containing protein | - |
| M1F45_RS04500 (M1F45_04490) | 911322..911537 | + | 216 | WP_021285875.1 | hypothetical protein | - |
| M1F45_RS04505 (M1F45_04495) | 911540..911761 | + | 222 | WP_001123688.1 | DUF3269 family protein | - |
| M1F45_RS04510 (M1F45_04500) | 911771..912178 | + | 408 | WP_021285874.1 | RusA family crossover junction endodeoxyribonuclease | - |
| M1F45_RS04515 (M1F45_04505) | 912178..912363 | + | 186 | WP_021285873.1 | DUF3113 family protein | - |
| M1F45_RS04520 (M1F45_04510) | 912364..912981 | + | 618 | WP_021285872.1 | SA1788 family PVL leukocidin-associated protein | - |
| M1F45_RS04525 (M1F45_04515) | 912981..913235 | + | 255 | WP_021285871.1 | DUF3310 domain-containing protein | - |
| M1F45_RS04530 (M1F45_04520) | 913235..913483 | + | 249 | WP_078069534.1 | SAV1978 family virulence-associated passenger protein | - |
| M1F45_RS04535 (M1F45_04525) | 913498..913704 | + | 207 | WP_021285869.1 | hypothetical protein | - |
| M1F45_RS04540 (M1F45_04530) | 913707..914114 | + | 408 | WP_000695770.1 | hypothetical protein | - |
| M1F45_RS04545 (M1F45_04535) | 914111..914458 | + | 348 | WP_000979209.1 | YopX family protein | - |
| M1F45_RS04550 (M1F45_04540) | 914455..914763 | + | 309 | WP_000144708.1 | hypothetical protein | - |
| M1F45_RS04555 (M1F45_04545) | 914756..915007 | + | 252 | WP_031267622.1 | DUF1024 family protein | Toxin Detail |
| M1F45_RS04560 (M1F45_04550) | 914997..915170 | + | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| M1F45_RS04565 (M1F45_04555) | 915171..915332 | + | 162 | WP_000889684.1 | hypothetical protein | - |
| M1F45_RS04570 (M1F45_04560) | 915347..915853 | + | 507 | WP_001061842.1 | dUTPase | - |
| M1F45_RS04575 (M1F45_04565) | 915890..916096 | + | 207 | WP_021285914.1 | DUF1381 domain-containing protein | - |
| M1F45_RS04580 (M1F45_04570) | 916093..916296 | + | 204 | WP_000141180.1 | hypothetical protein | - |
| M1F45_RS04585 (M1F45_04575) | 916289..916525 | + | 237 | WP_000608281.1 | hypothetical protein | - |
| M1F45_RS04590 (M1F45_04580) | 916515..916904 | + | 390 | WP_169538641.1 | hypothetical protein | - |
| M1F45_RS04595 (M1F45_04585) | 916901..917074 | + | 174 | WP_000595258.1 | transcriptional activator RinB | - |
| M1F45_RS04600 (M1F45_04590) | 917075..917476 | + | 402 | WP_000286968.1 | hypothetical protein | - |
| M1F45_RS04605 (M1F45_04595) | 917824..918204 | + | 381 | WP_031838201.1 | DNA-binding protein | - |
| M1F45_RS04610 (M1F45_04600) | 918188..919453 | + | 1266 | WP_031838202.1 | PBSX family phage terminase large subunit | - |
| M1F45_RS04615 (M1F45_04605) | 919472..920878 | + | 1407 | WP_031886702.1 | phage portal protein | - |
| M1F45_RS04620 (M1F45_04610) | 920817..921797 | + | 981 | WP_049949321.1 | phage head morphogenesis protein | - |
| M1F45_RS04625 (M1F45_04615) | 921895..922491 | + | 597 | WP_015967248.1 | phage scaffolding protein | - |
| M1F45_RS04630 (M1F45_04620) | 922512..923336 | + | 825 | WP_031838205.1 | N4-gp56 family major capsid protein | - |
| M1F45_RS04635 (M1F45_04625) | 923353..923679 | + | 327 | WP_031838206.1 | Rho termination factor N-terminal domain-containing protein | - |
| M1F45_RS04640 (M1F45_04630) | 923679..923993 | + | 315 | WP_031838207.1 | phage head-tail connector protein | - |
| M1F45_RS04645 (M1F45_04635) | 923986..924321 | + | 336 | WP_031838208.1 | phage head closure protein | - |
| M1F45_RS04650 (M1F45_04640) | 924308..924721 | + | 414 | WP_031838209.1 | HK97 gp10 family phage protein | - |
| M1F45_RS04655 (M1F45_04645) | 924734..925171 | + | 438 | WP_031838210.1 | DUF3168 domain-containing protein | - |
| M1F45_RS04660 (M1F45_04650) | 925158..925718 | + | 561 | WP_000046067.1 | hypothetical protein | - |
| M1F45_RS04665 (M1F45_04655) | 925780..926274 | + | 495 | WP_000141084.1 | tail assembly chaperone | - |
| M1F45_RS04670 (M1F45_04660) | 926295..926636 | + | 342 | WP_049949322.1 | hypothetical protein | - |
| M1F45_RS04675 (M1F45_04665) | 926639..929608 | + | 2970 | WP_031838212.1 | terminase | - |
| M1F45_RS04680 (M1F45_04670) | 929623..930558 | + | 936 | WP_031838213.1 | phage tail family protein | - |
| M1F45_RS04685 (M1F45_04675) | 930569..932455 | + | 1887 | WP_031903449.1 | SGNH/GDSL hydrolase family protein | - |
| M1F45_RS04690 (M1F45_04680) | 932468..934366 | + | 1899 | WP_031838215.1 | hypothetical protein | - |
| M1F45_RS04695 (M1F45_04685) | 934366..936189 | + | 1824 | WP_031838216.1 | BppU family phage baseplate upper protein | - |
| M1F45_RS04700 (M1F45_04690) | 936189..936566 | + | 378 | WP_031838217.1 | DUF2977 domain-containing protein | - |
| M1F45_RS04705 (M1F45_04695) | 936570..936743 | + | 174 | WP_078098837.1 | XkdX family protein | - |
| M1F45_RS04710 (M1F45_04700) | 936782..937216 | + | 435 | WP_031903468.1 | hypothetical protein | - |
| M1F45_RS04715 (M1F45_04705) | 937200..937595 | + | 396 | WP_031838220.1 | hypothetical protein | - |
| M1F45_RS04720 (M1F45_04710) | 937648..939522 | + | 1875 | WP_031886698.1 | glucosaminidase domain-containing protein | - |
| M1F45_RS04725 (M1F45_04715) | 939535..940113 | + | 579 | Protein_920 | phage baseplate upper protein | - |
| M1F45_RS04730 (M1F45_04720) | 941410..942129 | + | 720 | WP_223877258.1 | SGNH/GDSL hydrolase family protein | - |
| M1F45_RS04735 (M1F45_04725) | 942185..942622 | + | 438 | WP_021285832.1 | phage holin | - |
| M1F45_RS04740 (M1F45_04730) | 942603..944048 | + | 1446 | WP_021285831.1 | SH3 domain-containing protein | - |
| M1F45_RS04745 (M1F45_04735) | 944653..944847 | + | 195 | WP_021285829.1 | hypothetical protein | - |
| M1F45_RS04750 (M1F45_04740) | 944862..945062 | + | 201 | WP_021285828.1 | hypothetical protein | - |
| M1F45_RS04755 (M1F45_04745) | 945599..946144 | + | 546 | WP_000280154.1 | hypothetical protein | - |
| M1F45_RS04760 (M1F45_04750) | 946575..947303 | - | 729 | WP_000757407.1 | DUF5067 domain-containing protein | - |
| M1F45_RS04765 (M1F45_04755) | 947749..947904 | + | 156 | WP_014937001.1 | hypothetical protein | - |
| M1F45_RS04770 (M1F45_04760) | 947912..948433 | + | 522 | WP_000608190.1 | hypothetical protein | - |
| M1F45_RS04775 (M1F45_04765) | 948572..949102 | + | 531 | WP_001167164.1 | N-acetyltransferase | - |
| M1F45_RS04780 (M1F45_04770) | 949366..952161 | + | 2796 | WP_114161249.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| M1F45_RS04785 (M1F45_04775) | 952382..953896 | + | 1515 | WP_021286062.1 | von Willebrand factor binding protein Vwb | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|