MGE detailed information
MGE type: Prophage MGE length: 46881 bp
Accession: NZ_CP096532 Location: 362163..409043 Organism: Staphylococcus aureus strain RIVM_M083782 Replicon: chromosome
Accession: NZ_CP096532 Location: 362163..409043 Organism: Staphylococcus aureus strain RIVM_M083782 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F48_RS01590 (M1F48_01585) | 357607..358275 | + | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| M1F48_RS01595 (M1F48_01590) | 358405..359718 | - | 1314 | WP_001077706.1 | YjiH family protein | - |
| M1F48_RS01600 (M1F48_01595) | 360135..362069 | + | 1935 | Protein_317 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| M1F48_RS01605 (M1F48_01600) | 362163..363368 | - | 1206 | WP_031920108.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| M1F48_RS01610 (M1F48_01605) | 363494..364108 | + | 615 | WP_000191459.1 | hypothetical protein | - |
| M1F48_RS01615 (M1F48_01610) | 364105..364251 | - | 147 | WP_078067907.1 | hypothetical protein | - |
| M1F48_RS01620 (M1F48_01615) | 364481..365077 | - | 597 | WP_031796639.1 | hypothetical protein | - |
| M1F48_RS01625 (M1F48_01620) | 365095..365556 | - | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| M1F48_RS01630 (M1F48_01625) | 365569..365883 | - | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| M1F48_RS01635 (M1F48_01630) | 366035..366271 | + | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| M1F48_RS01640 (M1F48_01635) | 366285..367061 | + | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| M1F48_RS01645 (M1F48_01640) | 367090..367233 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| M1F48_RS01650 (M1F48_01645) | 367293..367478 | + | 186 | Protein_327 | hypothetical protein | - |
| M1F48_RS01655 (M1F48_01650) | 367493..367642 | + | 150 | WP_000771849.1 | hypothetical protein | - |
| M1F48_RS01660 (M1F48_01655) | 367683..367895 | - | 213 | WP_000362645.1 | hypothetical protein | - |
| M1F48_RS01665 (M1F48_01660) | 367964..368161 | + | 198 | WP_031838117.1 | hypothetical protein | - |
| M1F48_RS01670 (M1F48_01665) | 368148..368529 | - | 382 | Protein_331 | DUF2513 domain-containing protein | - |
| M1F48_RS01675 (M1F48_01670) | 368596..368841 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| M1F48_RS01680 (M1F48_01675) | 368810..369175 | - | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| M1F48_RS01685 (M1F48_01680) | 369230..369445 | + | 216 | WP_001097552.1 | hypothetical protein | - |
| M1F48_RS01690 (M1F48_01685) | 369470..369733 | + | 264 | WP_016187436.1 | helix-turn-helix domain-containing protein | - |
| M1F48_RS01695 (M1F48_01690) | 369746..369907 | + | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| M1F48_RS01700 (M1F48_01695) | 369986..370309 | + | 324 | WP_000174994.1 | hypothetical protein | - |
| M1F48_RS01705 (M1F48_01700) | 370324..370686 | + | 363 | WP_000985976.1 | hypothetical protein | - |
| M1F48_RS01710 (M1F48_01705) | 370683..371849 | + | 1167 | WP_031794996.1 | DUF2800 domain-containing protein | - |
| M1F48_RS01715 (M1F48_01710) | 371876..372433 | + | 558 | WP_000645049.1 | DUF2815 family protein | - |
| M1F48_RS01720 (M1F48_01715) | 372502..374454 | + | 1953 | WP_078099133.1 | DNA polymerase | - |
| M1F48_RS01725 (M1F48_01720) | 374466..374621 | + | 156 | WP_000152769.1 | hypothetical protein | - |
| M1F48_RS01730 (M1F48_01725) | 374621..374806 | + | 186 | WP_001187249.1 | DUF3113 family protein | - |
| M1F48_RS01735 (M1F48_01730) | 374807..375166 | + | 360 | WP_031903995.1 | SA1788 family PVL leukocidin-associated protein | - |
| M1F48_RS01740 (M1F48_01735) | 375166..375423 | + | 258 | WP_015994745.1 | DUF3310 domain-containing protein | - |
| M1F48_RS01745 (M1F48_01740) | 375426..375626 | + | 201 | WP_031796775.1 | hypothetical protein | - |
| M1F48_RS01750 (M1F48_01745) | 375635..375883 | + | 249 | WP_078099081.1 | phi PVL orf 51-like protein | - |
| M1F48_RS01755 (M1F48_01750) | 375898..376104 | + | 207 | WP_267428910.1 | hypothetical protein | - |
| M1F48_RS01760 (M1F48_01755) | 376107..376514 | + | 408 | WP_000695770.1 | hypothetical protein | - |
| M1F48_RS01765 (M1F48_01760) | 376511..376858 | + | 348 | WP_000979209.1 | YopX family protein | - |
| M1F48_RS01770 | 376855..376980 | + | 126 | WP_000144696.1 | hypothetical protein | - |
| M1F48_RS01775 (M1F48_01765) | 377011..377400 | + | 390 | WP_001568228.1 | hypothetical protein | - |
| M1F48_RS01780 (M1F48_01770) | 377397..377549 | + | 153 | WP_016187444.1 | hypothetical protein | - |
| M1F48_RS01785 (M1F48_01775) | 377617..377817 | + | 201 | WP_000265258.1 | DUF1514 family protein | - |
| M1F48_RS01790 (M1F48_01780) | 377869..380316 | + | 2448 | WP_267428885.1 | virulence-associated E family protein | - |
| M1F48_RS01795 (M1F48_01785) | 380425..380523 | - | 99 | WP_001801650.1 | hypothetical protein | - |
| M1F48_RS01800 (M1F48_01790) | 380657..380947 | + | 291 | WP_031903922.1 | VRR-NUC domain-containing protein | - |
| M1F48_RS01805 (M1F48_01795) | 380928..382295 | + | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| M1F48_RS01810 (M1F48_01800) | 382308..382745 | + | 438 | WP_267428911.1 | transcriptional regulator | - |
| M1F48_RS01815 (M1F48_01805) | 382902..383216 | + | 315 | WP_113587697.1 | HNH endonuclease | - |
| M1F48_RS01820 (M1F48_01810) | 383345..383650 | + | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| M1F48_RS01825 (M1F48_01815) | 383640..385331 | + | 1692 | WP_267428912.1 | terminase large subunit | - |
| M1F48_RS01830 (M1F48_01820) | 385336..386574 | + | 1239 | WP_001100664.1 | phage portal protein | - |
| M1F48_RS01835 (M1F48_01825) | 386558..387331 | + | 774 | WP_000061866.1 | Clp protease ClpP | - |
| M1F48_RS01840 (M1F48_01830) | 387343..388506 | + | 1164 | WP_001142738.1 | phage major capsid protein | - |
| M1F48_RS01845 (M1F48_01835) | 388575..388853 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| M1F48_RS01850 (M1F48_01840) | 388865..389197 | + | 333 | WP_000395499.1 | hypothetical protein | - |
| M1F48_RS01855 (M1F48_01845) | 389194..389595 | + | 402 | WP_000110019.1 | hypothetical protein | - |
| M1F48_RS01860 (M1F48_01850) | 389596..389991 | + | 396 | WP_001636966.1 | DUF3168 domain-containing protein | - |
| M1F48_RS01865 (M1F48_01855) | 390026..390667 | + | 642 | WP_031768043.1 | phage tail protein | - |
| M1F48_RS01870 (M1F48_01860) | 390759..391214 | + | 456 | WP_031768047.1 | Ig-like domain-containing protein | - |
| M1F48_RS01875 (M1F48_01865) | 391272..391622 | + | 351 | WP_000589165.1 | hypothetical protein | - |
| M1F48_RS01880 (M1F48_01870) | 391664..391822 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| M1F48_RS01885 (M1F48_01875) | 391836..398036 | + | 6201 | WP_267428913.1 | phage tail tape measure protein | - |
| M1F48_RS01890 (M1F48_01880) | 398036..398860 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| M1F48_RS01895 (M1F48_01885) | 398869..400452 | + | 1584 | WP_031919316.1 | prophage endopeptidase tail family protein | - |
| M1F48_RS01900 (M1F48_01890) | 400452..400742 | + | 291 | WP_000179860.1 | hypothetical protein | - |
| M1F48_RS01905 (M1F48_01895) | 400758..402668 | + | 1911 | WP_031797208.1 | hypothetical protein | - |
| M1F48_RS01910 (M1F48_01900) | 402668..404134 | + | 1467 | WP_267428914.1 | BppU family phage baseplate upper protein | - |
| M1F48_RS01915 (M1F48_01905) | 404134..404523 | + | 390 | WP_001166606.1 | DUF2977 domain-containing protein | - |
| M1F48_RS01920 (M1F48_01910) | 404516..404680 | + | 165 | WP_000916022.1 | XkdX family protein | - |
| M1F48_RS01925 (M1F48_01915) | 404726..405025 | + | 300 | WP_000466774.1 | DUF2951 family protein | - |
| M1F48_RS01930 (M1F48_01920) | 405161..405598 | + | 438 | WP_000354117.1 | phage holin | - |
| M1F48_RS01935 (M1F48_01925) | 405579..407024 | + | 1446 | WP_031776074.1 | SH3 domain-containing protein | - |
| M1F48_RS01940 (M1F48_01930) | 407927..408106 | + | 180 | WP_000201920.1 | hypothetical protein | - |
| M1F48_RS01945 (M1F48_01935) | 408128..408655 | + | 528 | WP_000455173.1 | DUF4065 domain-containing protein | - |
| M1F48_RS01950 (M1F48_01940) | 408645..409043 | + | 399 | WP_000557464.1 | hypothetical protein | - |
| M1F48_RS01955 | 409310..409432 | + | 123 | WP_000346419.1 | hypothetical protein | - |
| M1F48_RS01960 (M1F48_01945) | 409674..410501 | - | 828 | WP_000136026.1 | alpha/beta hydrolase | - |
| M1F48_RS01965 (M1F48_01950) | 410559..411773 | - | 1215 | WP_000286472.1 | NADH-dependent flavin oxidoreductase | - |
| M1F48_RS01970 (M1F48_01955) | 411869..411961 | + | 93 | WP_014936975.1 | hypothetical protein | - |
| M1F48_RS01975 (M1F48_01960) | 412075..413076 | + | 1002 | WP_000240067.1 | LLM class flavin-dependent oxidoreductase | - |
| M1F48_RS01980 (M1F48_01965) | 413110..413442 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|