MGE detailed information
MGE type: Prophage MGE length: 54291 bp
Accession: NZ_CP096530 Location: 615408..669698 Organism: Staphylococcus aureus strain RIVM_M084526 Replicon: chromosome
Accession: NZ_CP096530 Location: 615408..669698 Organism: Staphylococcus aureus strain RIVM_M084526 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F49_RS02810 (M1F49_02810) | 610810..611475 | - | 666 | WP_000129074.1 | bacillithiol biosynthesis deacetylase BshB2 | - |
| M1F49_RS02815 (M1F49_02815) | 611489..611851 | - | 363 | WP_001574742.1 | YojF family protein | - |
| M1F49_RS02820 (M1F49_02820) | 612128..612886 | + | 759 | WP_000866412.1 | glucosamine-6-phosphate deaminase | - |
| M1F49_RS02825 (M1F49_02825) | 612963..613595 | + | 633 | WP_000422864.1 | 3-hexulose-6-phosphate synthase | - |
| M1F49_RS02830 (M1F49_02830) | 613597..614145 | + | 549 | WP_001051594.1 | 6-phospho-3-hexuloisomerase | - |
| M1F49_RS02835 (M1F49_02835) | 614258..614905 | + | 648 | WP_000667094.1 | HAD family hydrolase | - |
| M1F49_RS02840 (M1F49_02840) | 615408..616808 | + | 1401 | WP_000347066.1 | MFS transporter | - |
| M1F49_RS02845 (M1F49_02845) | 617353..618729 | + | 1377 | WP_001100824.1 | long-chain fatty acid--CoA ligase | - |
| M1F49_RS02850 (M1F49_02850) | 618731..619870 | + | 1140 | WP_001070693.1 | thiolase family protein | - |
| M1F49_RS02855 (M1F49_02855) | 619845..620210 | + | 366 | WP_001165061.1 | hypothetical protein | - |
| M1F49_RS02860 (M1F49_02860) | 620213..620482 | + | 270 | WP_000671092.1 | hypothetical protein | - |
| M1F49_RS02865 (M1F49_02865) | 620683..620850 | - | 168 | WP_000587958.1 | C1q-binding complement inhibitor VraX | - |
| M1F49_RS02870 (M1F49_02870) | 621384..622214 | - | 831 | WP_001185462.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| M1F49_RS02875 (M1F49_02875) | 622398..623054 | + | 657 | WP_000455258.1 | uracil-DNA glycosylase | - |
| M1F49_RS02880 (M1F49_02880) | 623055..623228 | + | 174 | Protein_552 | DUF5327 family protein | - |
| M1F49_RS02885 (M1F49_02885) | 623304..624509 | - | 1206 | WP_031585161.1 | tyrosine-type recombinase/integrase | - |
| M1F49_RS02890 (M1F49_02890) | 624635..625249 | + | 615 | WP_000191464.1 | hypothetical protein | - |
| M1F49_RS02895 (M1F49_02895) | 625246..625392 | - | 147 | WP_078067907.1 | hypothetical protein | - |
| M1F49_RS02900 (M1F49_02900) | 625622..626218 | - | 597 | WP_031796639.1 | hypothetical protein | - |
| M1F49_RS02905 (M1F49_02905) | 626275..626886 | - | 612 | WP_267417186.1 | XRE family transcriptional regulator | - |
| M1F49_RS02910 (M1F49_02910) | 627058..627285 | + | 228 | WP_001030311.1 | hypothetical protein | - |
| M1F49_RS02915 (M1F49_02915) | 627311..628090 | + | 780 | WP_021285981.1 | phage antirepressor | - |
| M1F49_RS02920 (M1F49_02920) | 628091..628315 | + | 225 | WP_031867688.1 | hypothetical protein | - |
| M1F49_RS02925 (M1F49_02925) | 628352..628795 | + | 444 | WP_000435357.1 | hypothetical protein | - |
| M1F49_RS02930 (M1F49_02930) | 628810..628959 | + | 150 | WP_000771849.1 | hypothetical protein | - |
| M1F49_RS02935 (M1F49_02935) | 629000..629212 | - | 213 | WP_000362644.1 | hypothetical protein | - |
| M1F49_RS02940 (M1F49_02940) | 629282..629479 | + | 198 | WP_001148860.1 | hypothetical protein | - |
| M1F49_RS02945 (M1F49_02945) | 629466..629846 | - | 381 | WP_267417198.1 | DUF2513 domain-containing protein | - |
| M1F49_RS02950 (M1F49_02950) | 629913..630056 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| M1F49_RS02955 (M1F49_02955) | 630046..630255 | - | 210 | WP_000642492.1 | hypothetical protein | - |
| M1F49_RS02960 (M1F49_02960) | 630311..630556 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| M1F49_RS02965 (M1F49_02965) | 630525..630890 | - | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| M1F49_RS02970 (M1F49_02970) | 630945..631160 | + | 216 | WP_001036302.1 | hypothetical protein | - |
| M1F49_RS02975 (M1F49_02975) | 631185..631448 | + | 264 | WP_031776084.1 | helix-turn-helix domain-containing protein | - |
| M1F49_RS02980 (M1F49_02980) | 631461..631619 | + | 159 | WP_267417205.1 | DUF1270 family protein | - |
| M1F49_RS02985 (M1F49_02985) | 631717..632019 | + | 303 | WP_031794901.1 | DUF2482 family protein | - |
| M1F49_RS02990 (M1F49_02990) | 632024..632284 | + | 261 | WP_267417208.1 | DUF1108 family protein | - |
| M1F49_RS02995 (M1F49_02995) | 632292..632528 | + | 237 | WP_000802315.1 | hypothetical protein | - |
| M1F49_RS03000 (M1F49_03000) | 632521..633000 | + | 480 | WP_070044634.1 | siphovirus Gp157 family protein | - |
| M1F49_RS03005 (M1F49_03005) | 633000..633638 | + | 639 | WP_021285877.1 | ERF family protein | - |
| M1F49_RS03010 (M1F49_03010) | 633638..634063 | + | 426 | WP_050960859.1 | single-stranded DNA-binding protein | - |
| M1F49_RS03015 (M1F49_03015) | 634077..634751 | + | 675 | WP_267417222.1 | putative HNHc nuclease | - |
| M1F49_RS03020 (M1F49_03020) | 634744..635499 | + | 756 | WP_267417224.1 | DnaD domain protein | - |
| M1F49_RS03025 (M1F49_03025) | 635499..635855 | + | 357 | WP_001132247.1 | hypothetical protein | - |
| M1F49_RS03030 (M1F49_03030) | 635852..637093 | + | 1242 | WP_031794787.1 | DnaB helicase C-terminal domain-containing protein | - |
| M1F49_RS03035 (M1F49_03035) | 637090..637305 | + | 216 | WP_031794786.1 | hypothetical protein | - |
| M1F49_RS03040 (M1F49_03040) | 637308..637529 | + | 222 | WP_001123688.1 | DUF3269 family protein | - |
| M1F49_RS03045 (M1F49_03045) | 637539..637943 | + | 405 | WP_000049794.1 | DUF1064 domain-containing protein | - |
| M1F49_RS03050 (M1F49_03050) | 637948..638133 | + | 186 | WP_001187243.1 | DUF3113 family protein | - |
| M1F49_RS03055 (M1F49_03055) | 638134..638439 | + | 306 | WP_000101252.1 | hypothetical protein | - |
| M1F49_RS03060 (M1F49_03060) | 638567..638923 | + | 357 | WP_001557189.1 | SA1788 family PVL leukocidin-associated protein | - |
| M1F49_RS03065 (M1F49_03065) | 638927..639169 | + | 243 | WP_031837732.1 | SAV1978 family virulence-associated passenger protein | - |
| M1F49_RS03070 (M1F49_03070) | 639183..639389 | + | 207 | WP_000693989.1 | hypothetical protein | - |
| M1F49_RS03075 (M1F49_03075) | 639392..639799 | + | 408 | WP_000695771.1 | hypothetical protein | - |
| M1F49_RS03080 (M1F49_03080) | 639796..639990 | + | 195 | WP_031837730.1 | hypothetical protein | - |
| M1F49_RS03085 (M1F49_03085) | 639987..640424 | + | 438 | WP_000982714.1 | YopX family protein | - |
| M1F49_RS03090 (M1F49_03090) | 640421..640705 | + | 285 | WP_031910183.1 | hypothetical protein | - |
| M1F49_RS03095 (M1F49_03095) | 640698..640949 | + | 252 | WP_000370297.1 | DUF1024 family protein | - |
| M1F49_RS03100 (M1F49_03100) | 640936..641106 | + | 171 | WP_000714407.1 | hypothetical protein | - |
| M1F49_RS03105 (M1F49_03105) | 641099..641635 | + | 537 | WP_001066452.1 | dUTPase | - |
| M1F49_RS03110 (M1F49_03110) | 641672..641878 | + | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| M1F49_RS03115 (M1F49_03115) | 641875..642261 | + | 387 | WP_000592221.1 | hypothetical protein | - |
| M1F49_RS03120 (M1F49_03120) | 642258..642410 | + | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| M1F49_RS03125 (M1F49_03125) | 642478..642678 | + | 201 | WP_181276913.1 | DUF1514 family protein | - |
| M1F49_RS03130 (M1F49_03130) | 642662..642982 | + | 321 | Protein_602 | ATP-dependent helicase | - |
| M1F49_RS03135 (M1F49_03135) | 642995..643432 | + | 438 | WP_015986202.1 | hypothetical protein | - |
| M1F49_RS03140 (M1F49_03140) | 643589..643903 | + | 315 | WP_031867669.1 | HNH endonuclease | - |
| M1F49_RS03145 (M1F49_03145) | 644031..644336 | + | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| M1F49_RS03150 (M1F49_03150) | 644326..646017 | + | 1692 | WP_015974521.1 | terminase large subunit | - |
| M1F49_RS03155 (M1F49_03155) | 646022..647260 | + | 1239 | WP_001100669.1 | phage portal protein | - |
| M1F49_RS03160 (M1F49_03160) | 647244..648017 | + | 774 | WP_031775146.1 | Clp protease ClpP | - |
| M1F49_RS03165 (M1F49_03165) | 648029..649192 | + | 1164 | WP_031776039.1 | phage major capsid protein | - |
| M1F49_RS03170 (M1F49_03170) | 649261..649539 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| M1F49_RS03175 (M1F49_03175) | 649551..649883 | + | 333 | WP_000395499.1 | hypothetical protein | - |
| M1F49_RS03180 (M1F49_03180) | 649880..650281 | + | 402 | WP_000110019.1 | hypothetical protein | - |
| M1F49_RS03185 (M1F49_03185) | 650282..650677 | + | 396 | WP_001023808.1 | DUF3168 domain-containing protein | - |
| M1F49_RS03190 (M1F49_03190) | 650712..651353 | + | 642 | WP_000807536.1 | phage tail protein | - |
| M1F49_RS03195 (M1F49_03195) | 651445..651900 | + | 456 | WP_000169128.1 | Ig-like domain-containing protein | - |
| M1F49_RS03200 (M1F49_03200) | 651958..652308 | + | 351 | WP_000589165.1 | hypothetical protein | - |
| M1F49_RS03205 (M1F49_03205) | 652350..652508 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| M1F49_RS03210 (M1F49_03210) | 652522..658722 | + | 6201 | WP_031868191.1 | phage tail tape measure protein | - |
| M1F49_RS03215 (M1F49_03215) | 658722..659546 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| M1F49_RS03220 (M1F49_03220) | 659555..661138 | + | 1584 | WP_016187454.1 | prophage endopeptidase tail family protein | - |
| M1F49_RS03225 (M1F49_03225) | 661138..661428 | + | 291 | WP_000179860.1 | hypothetical protein | - |
| M1F49_RS03230 (M1F49_03230) | 661444..663354 | + | 1911 | WP_000429551.1 | minor structural protein | - |
| M1F49_RS03235 (M1F49_03235) | 663354..664820 | + | 1467 | WP_031775142.1 | BppU family phage baseplate upper protein | - |
| M1F49_RS03240 (M1F49_03240) | 664820..665209 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| M1F49_RS03245 (M1F49_03245) | 665202..665366 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| M1F49_RS03250 (M1F49_03250) | 665412..665711 | + | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| M1F49_RS03255 (M1F49_03255) | 665847..666149 | + | 303 | WP_000339144.1 | phage holin | - |
| M1F49_RS03260 (M1F49_03260) | 666160..667614 | + | 1455 | WP_000909210.1 | N-acetylmuramoyl-L-alanine amidase | - |
| M1F49_RS03265 (M1F49_03265) | 668230..669066 | + | 837 | WP_000675478.1 | hypothetical protein | - |
| M1F49_RS03270 (M1F49_03270) | 669309..669698 | + | 390 | WP_050438881.1 | hypothetical protein | - |
| M1F49_RS03275 (M1F49_03275) | 669831..670199 | + | 369 | WP_000765183.1 | DUF423 domain-containing protein | - |
| M1F49_RS03280 (M1F49_03280) | 670320..671804 | + | 1485 | WP_000412518.1 | APC family permease | - |
| M1F49_RS03285 (M1F49_03285) | 671946..672398 | - | 453 | WP_000498572.1 | threonine/serine exporter family protein | - |
| M1F49_RS03290 (M1F49_03290) | 672411..673175 | - | 765 | WP_000354088.1 | threonine/serine exporter ThrE family protein | - |
| M1F49_RS03295 (M1F49_03295) | 673724..674476 | - | 753 | WP_000075712.1 | heme-dependent peroxidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|