MGE detailed information
MGE type: Prophage MGE length: 87017 bp
Accession: NZ_CP096251 Location: 6565926..6652942 Organism: Bradyrhizobium barranii subsp. apii strain 38S5 Replicon: chromosome
Accession: NZ_CP096251 Location: 6565926..6652942 Organism: Bradyrhizobium barranii subsp. apii strain 38S5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J4G48_RS31445 (J4G48_0031445) | 6561006..6561743 | + | 738 | WP_166105971.1 | GntR family transcriptional regulator | - |
| J4G48_RS31450 (J4G48_0031450) | 6561848..6564823 | + | 2976 | WP_208070383.1 | FAD-binding and (Fe-S)-binding domain-containing protein | - |
| J4G48_RS31455 (J4G48_0031455) | 6564816..6565244 | + | 429 | WP_038957479.1 | heme-binding protein | - |
| J4G48_RS31460 (J4G48_0031460) | 6565926..6567014 | - | 1089 | WP_208070374.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| J4G48_RS31465 (J4G48_0031465) | 6567234..6568181 | + | 948 | WP_248594396.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| J4G48_RS31470 (J4G48_0031470) | 6568462..6569688 | - | 1227 | WP_208067398.1 | group II intron reverse transcriptase/maturase | - |
| J4G48_RS31475 (J4G48_0031475) | 6570273..6571016 | - | 744 | WP_208070372.1 | metallophosphoesterase | - |
| J4G48_RS31480 (J4G48_0031480) | 6571033..6571422 | - | 390 | WP_208070371.1 | hypothetical protein | - |
| J4G48_RS31485 (J4G48_0031485) | 6572082..6573161 | + | 1080 | WP_208070369.1 | IS630 family transposase ISRfr1 | Transposase |
| J4G48_RS31490 (J4G48_0031490) | 6573673..6573906 | - | 234 | WP_208070368.1 | DUF2274 domain-containing protein | - |
| J4G48_RS31495 (J4G48_0031495) | 6573914..6575134 | - | 1221 | WP_208070367.1 | TrbI/VirB10 family protein | - |
| J4G48_RS31500 (J4G48_0031500) | 6575131..6576087 | - | 957 | Protein_6285 | P-type conjugative transfer protein TrbG | - |
| J4G48_RS31505 (J4G48_0031505) | 6576144..6576458 | - | 315 | Protein_6286 | VirB8/TrbF family protein | - |
| J4G48_RS31510 (J4G48_0031510) | 6576373..6576642 | + | 270 | WP_248594456.1 | IS66 family transposase ISRm2 | Transposase |
| J4G48_RS31515 (J4G48_0031515) | 6576695..6578266 | + | 1572 | WP_166213725.1 | IS66 family transposase ISRm2 | Transposase |
| J4G48_RS31520 (J4G48_0031520) | 6578300..6580543 | + | 2244 | Protein_6289 | conjugal transfer protein TrbE | - |
| J4G48_RS31525 (J4G48_0031525) | 6580481..6580675 | - | 195 | WP_225049100.1 | transposase | - |
| J4G48_RS31530 (J4G48_0031530) | 6580792..6581688 | + | 897 | WP_225049101.1 | aldo/keto reductase | - |
| J4G48_RS31535 (J4G48_0031535) | 6581683..6583500 | - | 1818 | Protein_6292 | lactate dehydrogenase | - |
| J4G48_RS31540 (J4G48_0031540) | 6583578..6584147 | - | 570 | WP_208070362.1 | hypothetical protein | - |
| J4G48_RS31545 (J4G48_0031545) | 6584348..6584938 | - | 591 | WP_208070360.1 | hypothetical protein | - |
| J4G48_RS31550 (J4G48_0031550) | 6585083..6586297 | - | 1215 | WP_208070357.1 | virulence-associated E family protein | - |
| J4G48_RS31555 (J4G48_0031555) | 6586895..6588094 | + | 1200 | WP_208070355.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| J4G48_RS31560 (J4G48_0031560) | 6588094..6588471 | + | 378 | WP_208070354.1 | hypothetical protein | - |
| J4G48_RS31565 (J4G48_0031565) | 6588600..6588854 | - | 255 | WP_208070352.1 | hypothetical protein | - |
| J4G48_RS31570 (J4G48_0031570) | 6588966..6589232 | - | 267 | WP_208070350.1 | hypothetical protein | - |
| J4G48_RS50925 | 6589368..6589502 | + | 135 | WP_256508371.1 | hypothetical protein | - |
| J4G48_RS31575 (J4G48_0031575) | 6589695..6590018 | - | 324 | WP_208070348.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| J4G48_RS31580 (J4G48_0031580) | 6590073..6590291 | - | 219 | WP_225049103.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J4G48_RS31585 (J4G48_0031585) | 6591596..6592431 | + | 836 | Protein_6303 | IS5 family transposase ISMdi21 | Transposase |
| J4G48_RS31590 (J4G48_0031590) | 6593382..6593612 | - | 231 | WP_208070345.1 | hypothetical protein | - |
| J4G48_RS31595 (J4G48_0031595) | 6593961..6594176 | + | 216 | WP_208070343.1 | hypothetical protein | - |
| J4G48_RS31600 (J4G48_0031600) | 6594239..6594442 | - | 204 | WP_208070341.1 | cold-shock protein | - |
| J4G48_RS31605 (J4G48_0031605) | 6594552..6596348 | - | 1797 | WP_225048950.1 | hypothetical protein | - |
| J4G48_RS31610 (J4G48_0031610) | 6596345..6596512 | - | 168 | WP_208070339.1 | hypothetical protein | - |
| J4G48_RS31615 (J4G48_0031615) | 6596509..6596676 | - | 168 | WP_208070337.1 | hypothetical protein | - |
| J4G48_RS31620 (J4G48_0031620) | 6596781..6597041 | - | 261 | WP_208070328.1 | hypothetical protein | - |
| J4G48_RS31625 (J4G48_0031625) | 6597041..6597370 | - | 330 | WP_208070326.1 | P27 family phage terminase small subunit | - |
| J4G48_RS31630 (J4G48_0031630) | 6597508..6598026 | - | 519 | WP_225048951.1 | HK97 family phage prohead protease | - |
| J4G48_RS31635 (J4G48_0031635) | 6598019..6598207 | - | 189 | WP_208070324.1 | hypothetical protein | - |
| J4G48_RS31640 (J4G48_0031640) | 6598200..6598781 | - | 582 | WP_208070322.1 | hypothetical protein | - |
| J4G48_RS31645 (J4G48_0031645) | 6598785..6599309 | - | 525 | WP_208070320.1 | hypothetical protein | - |
| J4G48_RS31650 (J4G48_0031650) | 6599614..6600678 | - | 1065 | WP_166204319.1 | IS630 family transposase ISRj1 | Transposase |
| J4G48_RS31655 (J4G48_0031655) | 6601015..6601929 | - | 915 | WP_225048952.1 | hypothetical protein | - |
| J4G48_RS31660 (J4G48_0031660) | 6601985..6603220 | - | 1236 | WP_208070318.1 | MarR family transcriptional regulator | - |
| J4G48_RS31665 (J4G48_0031665) | 6603442..6603630 | - | 189 | WP_208070317.1 | hypothetical protein | - |
| J4G48_RS31670 (J4G48_0031670) | 6603759..6604883 | - | 1125 | WP_208070314.1 | ParB/RepB/Spo0J family partition protein | - |
| J4G48_RS31675 (J4G48_0031675) | 6604880..6605083 | - | 204 | WP_225048953.1 | helix-turn-helix domain-containing protein | - |
| J4G48_RS31680 (J4G48_0031680) | 6605428..6605898 | + | 471 | WP_208070312.1 | hypothetical protein | - |
| J4G48_RS31685 (J4G48_0031685) | 6605895..6606164 | + | 270 | WP_208070310.1 | hypothetical protein | - |
| J4G48_RS31690 (J4G48_0031690) | 6606642..6606842 | - | 201 | WP_225048955.1 | hypothetical protein | - |
| J4G48_RS31695 (J4G48_0031695) | 6607457..6607819 | + | 363 | WP_208070309.1 | hypothetical protein | - |
| J4G48_RS31700 (J4G48_0031700) | 6607829..6608128 | + | 300 | WP_208070307.1 | hypothetical protein | - |
| J4G48_RS31705 (J4G48_0031705) | 6608125..6608271 | + | 147 | WP_208070302.1 | hypothetical protein | - |
| J4G48_RS31710 (J4G48_0031710) | 6608668..6608943 | - | 276 | WP_208070300.1 | hypothetical protein | - |
| J4G48_RS31715 (J4G48_0031715) | 6608960..6609292 | - | 333 | WP_208070298.1 | hypothetical protein | - |
| J4G48_RS31720 (J4G48_0031720) | 6609302..6609730 | - | 429 | WP_208070296.1 | hypothetical protein | - |
| J4G48_RS31725 (J4G48_0031725) | 6609734..6610153 | - | 420 | WP_208070294.1 | hypothetical protein | - |
| J4G48_RS31730 (J4G48_0031730) | 6610191..6610931 | - | 741 | WP_225048956.1 | hypothetical protein | - |
| J4G48_RS31735 (J4G48_0031735) | 6610981..6611118 | - | 138 | WP_208070292.1 | hypothetical protein | - |
| J4G48_RS31740 (J4G48_0031740) | 6611198..6611452 | + | 255 | WP_208070290.1 | hypothetical protein | - |
| J4G48_RS31745 (J4G48_0031745) | 6611458..6612753 | + | 1296 | WP_208070288.1 | hypothetical protein | - |
| J4G48_RS31750 (J4G48_0031750) | 6612860..6614491 | - | 1632 | WP_208070286.1 | hypothetical protein | - |
| J4G48_RS31755 (J4G48_0031755) | 6614621..6615679 | - | 1059 | WP_208070285.1 | hypothetical protein | - |
| J4G48_RS31760 (J4G48_0031760) | 6615690..6617231 | - | 1542 | WP_208070282.1 | hypothetical protein | - |
| J4G48_RS31765 (J4G48_0031765) | 6617224..6617652 | - | 429 | WP_208070280.1 | hypothetical protein | - |
| J4G48_RS31770 (J4G48_0031770) | 6617649..6618257 | - | 609 | WP_225048957.1 | hypothetical protein | - |
| J4G48_RS31775 (J4G48_0031775) | 6618265..6618993 | - | 729 | WP_208070278.1 | hypothetical protein | - |
| J4G48_RS31780 (J4G48_0031780) | 6618993..6620888 | - | 1896 | WP_208070270.1 | hypothetical protein | - |
| J4G48_RS31785 (J4G48_0031785) | 6620888..6621298 | - | 411 | WP_208070268.1 | hypothetical protein | - |
| J4G48_RS50930 | 6621298..6621426 | - | 129 | WP_256508372.1 | hypothetical protein | - |
| J4G48_RS31790 (J4G48_0031790) | 6621441..6621842 | - | 402 | WP_208070266.1 | gene transfer agent family protein | - |
| J4G48_RS31795 (J4G48_0031795) | 6621839..6622276 | - | 438 | WP_208070264.1 | phage tail tube protein | - |
| J4G48_RS31800 (J4G48_0031800) | 6622287..6622691 | - | 405 | WP_208070262.1 | DUF3168 domain-containing protein | - |
| J4G48_RS31805 (J4G48_0031805) | 6622688..6622855 | - | 168 | WP_208070259.1 | hypothetical protein | - |
| J4G48_RS31810 (J4G48_0031810) | 6622852..6623193 | - | 342 | WP_208070258.1 | head-tail adaptor protein | - |
| J4G48_RS31815 (J4G48_0031815) | 6623197..6623607 | - | 411 | WP_208070256.1 | hypothetical protein | - |
| J4G48_RS31820 (J4G48_0031820) | 6623625..6624284 | - | 660 | WP_208070254.1 | head-tail connector protein | - |
| J4G48_RS31825 (J4G48_0031825) | 6624297..6625913 | - | 1617 | WP_208070252.1 | SGNH/GDSL hydrolase family protein | - |
| J4G48_RS31830 (J4G48_0031830) | 6625971..6626342 | - | 372 | WP_208070250.1 | hypothetical protein | - |
| J4G48_RS31835 (J4G48_0031835) | 6626430..6626609 | - | 180 | WP_208070248.1 | hypothetical protein | - |
| J4G48_RS31840 (J4G48_0031840) | 6626717..6626902 | - | 186 | WP_208070246.1 | hypothetical protein | - |
| J4G48_RS31845 (J4G48_0031845) | 6627020..6628366 | - | 1347 | WP_208070244.1 | phage major capsid protein | - |
| J4G48_RS31850 (J4G48_0031850) | 6628381..6629097 | - | 717 | WP_225048958.1 | HK97 family phage prohead protease | - |
| J4G48_RS31855 (J4G48_0031855) | 6629094..6630350 | - | 1257 | WP_208070242.1 | phage portal protein | - |
| J4G48_RS31860 (J4G48_0031860) | 6630355..6632055 | - | 1701 | WP_208070239.1 | terminase large subunit | - |
| J4G48_RS31865 (J4G48_0031865) | 6632042..6632515 | - | 474 | WP_208070236.1 | hypothetical protein | - |
| J4G48_RS31870 (J4G48_0031870) | 6632598..6632918 | - | 321 | WP_225048959.1 | HNH endonuclease | - |
| J4G48_RS31875 (J4G48_0031875) | 6633160..6633705 | - | 546 | WP_208070234.1 | transcription termination/antitermination NusG family protein | - |
| J4G48_RS31880 (J4G48_0031880) | 6634056..6636851 | - | 2796 | WP_208070232.1 | phage/plasmid primase, P4 family | - |
| J4G48_RS31885 (J4G48_0031885) | 6636848..6637147 | - | 300 | WP_208070219.1 | hypothetical protein | - |
| J4G48_RS31890 (J4G48_0031890) | 6637280..6637552 | - | 273 | WP_208070217.1 | hypothetical protein | - |
| J4G48_RS31895 (J4G48_0031895) | 6637555..6637809 | - | 255 | WP_208073825.1 | hypothetical protein | - |
| J4G48_RS31900 (J4G48_0031900) | 6637815..6639614 | - | 1800 | WP_208070215.1 | hypothetical protein | - |
| J4G48_RS31905 (J4G48_0031905) | 6639629..6640132 | - | 504 | WP_208070213.1 | hypothetical protein | - |
| J4G48_RS31910 (J4G48_0031910) | 6640137..6640445 | - | 309 | WP_208070211.1 | hypothetical protein | - |
| J4G48_RS31915 (J4G48_0031915) | 6640442..6640969 | - | 528 | WP_208070209.1 | phosphohydrolase | - |
| J4G48_RS31920 (J4G48_0031920) | 6640966..6641403 | - | 438 | WP_208070207.1 | SANT/Myb-like DNA-binding domain-containing protein | - |
| J4G48_RS31925 (J4G48_0031925) | 6641400..6642482 | - | 1083 | WP_225048960.1 | hypothetical protein | - |
| J4G48_RS31930 (J4G48_0031930) | 6642479..6643636 | - | 1158 | WP_208070204.1 | phage Gp37/Gp68 family protein | - |
| J4G48_RS31935 (J4G48_0031935) | 6643633..6643968 | - | 336 | WP_208070202.1 | hypothetical protein | - |
| J4G48_RS31940 (J4G48_0031940) | 6643965..6644321 | - | 357 | WP_208070200.1 | hypothetical protein | - |
| J4G48_RS31945 (J4G48_0031945) | 6644314..6644628 | - | 315 | WP_208070198.1 | hypothetical protein | - |
| J4G48_RS31950 (J4G48_0031950) | 6644754..6645167 | - | 414 | WP_208070196.1 | hypothetical protein | - |
| J4G48_RS31955 (J4G48_0031955) | 6645164..6645406 | - | 243 | WP_208070194.1 | hypothetical protein | - |
| J4G48_RS31960 (J4G48_0031960) | 6645488..6646096 | + | 609 | WP_208070192.1 | S24 family peptidase | - |
| J4G48_RS31965 (J4G48_0031965) | 6646218..6646715 | + | 498 | WP_208070190.1 | phospholipase | - |
| J4G48_RS31970 (J4G48_0031970) | 6646712..6647104 | + | 393 | WP_208070188.1 | hypothetical protein | - |
| J4G48_RS31975 (J4G48_0031975) | 6647101..6647352 | + | 252 | WP_225048961.1 | hypothetical protein | - |
| J4G48_RS31980 (J4G48_0031980) | 6647327..6648442 | + | 1116 | WP_208070184.1 | hypothetical protein ; Integrase | Integrase |
| J4G48_RS31985 (J4G48_0031985) | 6648563..6650347 | - | 1785 | WP_208070182.1 | DUF262 domain-containing protein | - |
| J4G48_RS31995 (J4G48_0031995) | 6650877..6651461 | - | 585 | WP_071913245.1 | MerR family transcriptional regulator | - |
| J4G48_RS32000 (J4G48_0032000) | 6651486..6651827 | - | 342 | WP_028152484.1 | integration host factor subunit alpha | - |
| J4G48_RS32005 (J4G48_0032005) | 6651962..6652942 | - | 981 | WP_063982864.1 | beta-ketoacyl-ACP synthase III | - |
| J4G48_RS32010 (J4G48_0032010) | 6652939..6654000 | - | 1062 | WP_208070180.1 | phosphate acyltransferase PlsX | - |
| J4G48_RS32015 (J4G48_0032015) | 6654299..6654868 | - | 570 | WP_166097061.1 | DUF177 domain-containing protein | - |
| J4G48_RS32020 (J4G48_0032020) | 6654865..6655446 | - | 582 | WP_166097062.1 | ubiquinol-cytochrome C chaperone family protein | - |
| J4G48_RS32025 (J4G48_0032025) | 6655545..6656030 | + | 486 | WP_028152489.1 | outer membrane protein assembly factor BamE | - |
| J4G48_RS32030 (J4G48_0032030) | 6656148..6657149 | + | 1002 | WP_166097063.1 | tripartite tricarboxylate transporter substrate binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|