MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34102 bp
Accession: NZ_CP096228 Location: 1..34102 Organism: Xanthomonas citri pv. citri strain CQ13 Replicon: plasmid pXAC33
Accession: NZ_CP096228 Location: 1..34102 Organism: Xanthomonas citri pv. citri strain CQ13 Replicon: plasmid pXAC33
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XCQ_RS22000 (XCQ_22000) | 1..1221 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| XCQ_RS22005 (XCQ_22005) | 1587..5474 | - | 3888 | WP_248402898.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| XCQ_RS22010 (XCQ_22010) | 5720..5941 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| XCQ_RS22015 (XCQ_22015) | 6231..6767 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| XCQ_RS22020 (XCQ_22020) | 6757..6969 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| XCQ_RS22025 (XCQ_22025) | 6966..7217 | - | 252 | WP_125459571.1 | hypothetical protein | - |
| XCQ_RS22030 (XCQ_22030) | 7240..7572 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| XCQ_RS22035 (XCQ_22035) | 7572..7829 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| XCQ_RS22040 (XCQ_22040) | 8035..8637 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| XCQ_RS22045 (XCQ_22045) | 8621..8925 | + | 305 | Protein_9 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| XCQ_RS22050 (XCQ_22050) | 9092..9298 | - | 207 | Protein_10 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| XCQ_RS22055 (XCQ_22055) | 9343..9912 | - | 570 | Protein_11 | UPF0149 family protein | - |
| XCQ_RS22060 (XCQ_22060) | 9931..11145 | - | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| XCQ_RS22065 (XCQ_22065) | 11219..11401 | - | 183 | Protein_13 | UPF0149 family protein | - |
| XCQ_RS22070 (XCQ_22070) | 11420..14395 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| XCQ_RS22075 (XCQ_22075) | 14400..14819 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| XCQ_RS22080 (XCQ_22080) | 14819..15058 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| XCQ_RS22085 (XCQ_22085) | 15272..16195 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| XCQ_RS22090 (XCQ_22090) | 16314..19496 | - | 3183 | WP_248402899.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| XCQ_RS22095 (XCQ_22095) | 20750..20986 | - | 237 | WP_015463816.1 | plasmid partition protein ParG | - |
| XCQ_RS22100 (XCQ_22100) | 20983..21612 | - | 630 | WP_015463817.1 | ParA family partition ATPase | - |
| XCQ_RS22105 (XCQ_22105) | 21695..22432 | - | 738 | WP_011052960.1 | DNA-binding protein | - |
| XCQ_RS22110 (XCQ_22110) | 23067..23888 | - | 822 | WP_011052929.1 | hypothetical protein | - |
| XCQ_RS22115 (XCQ_22115) | 24528..24692 | + | 165 | WP_155400514.1 | hypothetical protein | - |
| XCQ_RS22120 (XCQ_22120) | 24741..25828 | + | 1088 | WP_087943923.1 | IS3 family transposase ISXac2 | Transposase |
| XCQ_RS22125 (XCQ_22125) | 25794..26423 | - | 630 | WP_011052932.1 | Tn3 family transposase ISPsy42 | Transposase |
| XCQ_RS22130 (XCQ_22130) | 26603..26854 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| XCQ_RS22135 (XCQ_22135) | 26851..27246 | + | 396 | WP_015463818.1 | type II toxin-antitoxin system VapC family toxin | - |
| XCQ_RS22140 (XCQ_22140) | 27258..27374 | + | 117 | Protein_28 | transposase | - |
| XCQ_RS22145 (XCQ_22145) | 27407..27784 | - | 378 | WP_040260048.1 | hypothetical protein | - |
| XCQ_RS22150 (XCQ_22150) | 27843..28088 | - | 246 | Protein_30 | IS3 family transposase ISStma14 | Transposase |
| XCQ_RS22155 (XCQ_22155) | 28228..28523 | + | 296 | Protein_31 | transposase | - |
| XCQ_RS22160 (XCQ_22160) | 28615..28788 | - | 174 | Protein_32 | hypothetical protein | - |
| XCQ_RS22165 (XCQ_22165) | 28788..29183 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| XCQ_RS22170 (XCQ_22170) | 29531..29977 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| XCQ_RS22175 (XCQ_22175) | 29974..30683 | + | 710 | Protein_35 | StbB family protein | - |
| XCQ_RS22180 (XCQ_22180) | 30732..31085 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| XCQ_RS22185 (XCQ_22185) | 31480..31689 | - | 210 | WP_015462608.1 | helix-turn-helix transcriptional regulator | - |
| XCQ_RS22190 (XCQ_22190) | 31686..31994 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| XCQ_RS22195 (XCQ_22195) | 32450..33076 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| XCQ_RS22200 (XCQ_22200) | 33073..33396 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| XCQ_RS22205 (XCQ_22205) | 33541..33855 | + | 315 | WP_005918227.1 | ParC family partition-associated protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|