MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85444 bp
Accession: NZ_CP096130 Location: 1..85444 Organism: Leptospira interrogans strain KR40 Replicon: plasmid pl_URK_3a
Accession: NZ_CP096130 Location: 1..85444 Organism: Leptospira interrogans strain KR40 Replicon: plasmid pl_URK_3a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MY479_RS17940 (MY479_18120) | 23..346 | + | 324 | WP_002078235.1 | hypothetical protein | - |
| MY479_RS17945 (MY479_18125) | 585..965 | - | 381 | WP_000473529.1 | hypothetical protein | - |
| MY479_RS17950 (MY479_18130) | 1122..1616 | - | 495 | WP_000636981.1 | GyrI-like domain-containing protein | - |
| MY479_RS17955 (MY479_18135) | 2524..2937 | + | 414 | WP_000401761.1 | hypothetical protein | - |
| MY479_RS17960 (MY479_18140) | 2947..3252 | + | 306 | WP_000249679.1 | hypothetical protein | - |
| MY479_RS17965 (MY479_18145) | 3594..4283 | - | 690 | WP_000217441.1 | hypothetical protein | - |
| MY479_RS17970 (MY479_18150) | 4280..7432 | - | 3153 | WP_002188661.1 | efflux RND transporter permease subunit | - |
| MY479_RS17975 (MY479_18155) | 7402..10455 | - | 3054 | WP_002188649.1 | efflux RND transporter permease subunit | - |
| MY479_RS17980 (MY479_18160) | 10506..12005 | - | 1500 | WP_025177537.1 | efflux RND transporter periplasmic adaptor subunit | - |
| MY479_RS17985 (MY479_18165) | 12011..12664 | - | 654 | WP_000581835.1 | hypothetical protein | - |
| MY479_RS17990 (MY479_18170) | 12661..13404 | - | 744 | WP_000713122.1 | lipoprotein | - |
| MY479_RS17995 (MY479_18175) | 13416..17066 | - | 3651 | WP_002188654.1 | Ig-like domain-containing protein | - |
| MY479_RS18000 (MY479_18180) | 17071..18660 | - | 1590 | WP_226999264.1 | TolC family protein | - |
| MY479_RS18005 (MY479_18185) | 19549..20112 | - | 564 | WP_001009550.1 | TPR repeat-containing protein YrrB | VF |
| MY479_RS18010 (MY479_18190) | 20439..20630 | + | 192 | Protein_14 | hypothetical protein | - |
| MY479_RS18015 (MY479_18195) | 20728..20958 | - | 231 | WP_000657920.1 | hypothetical protein | - |
| MY479_RS18020 (MY479_18200) | 21100..21309 | - | 210 | WP_000387553.1 | hypothetical protein | - |
| MY479_RS18025 (MY479_20030) | 21530..22006 | - | 477 | WP_000725696.1 | hypothetical protein | - |
| MY479_RS18030 (MY479_17830) | 22181..22378 | - | 198 | WP_025177710.1 | hypothetical protein | - |
| MY479_RS18035 (MY479_17835) | 22545..22808 | - | 264 | WP_025177711.1 | hypothetical protein | - |
| MY479_RS18040 (MY479_17840) | 22942..23130 | + | 189 | WP_002188652.1 | hypothetical protein | - |
| MY479_RS18045 (MY479_17845) | 23331..23927 | - | 597 | WP_002188664.1 | hypothetical protein | - |
| MY479_RS18050 (MY479_17850) | 24002..27370 | - | 3369 | WP_257957354.1 | hypothetical protein | - |
| MY479_RS18055 (MY479_17855) | 27755..28414 | - | 660 | WP_001165943.1 | hypothetical protein | - |
| MY479_RS18060 (MY479_17860) | 28398..31127 | - | 2730 | WP_249763987.1 | M23 family metallopeptidase | - |
| MY479_RS18065 (MY479_17865) | 31937..32584 | - | 648 | WP_000717996.1 | hypothetical protein | - |
| MY479_RS18070 (MY479_17870) | 32590..39108 | - | 6519 | WP_257957355.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| MY479_RS18075 (MY479_17875) | 39681..40733 | - | 1053 | WP_025177728.1 | hypothetical protein | - |
| MY479_RS18080 (MY479_17880) | 41389..42822 | - | 1434 | WP_002188898.1 | hypothetical protein | - |
| MY479_RS18085 (MY479_17885) | 43217..44128 | - | 912 | WP_000253890.1 | ParB/RepB/Spo0J family partition protein | - |
| MY479_RS18090 (MY479_17890) | 44156..44980 | - | 825 | WP_000078859.1 | ParA family protein | - |
| MY479_RS18095 (MY479_17895) | 45168..45545 | - | 378 | WP_000105508.1 | helix-turn-helix transcriptional regulator | - |
| MY479_RS18100 (MY479_17900) | 46631..48064 | + | 1434 | WP_082283190.1 | helix-turn-helix domain-containing protein | - |
| MY479_RS18105 (MY479_17905) | 48793..49722 | + | 930 | WP_257957356.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| MY479_RS18110 (MY479_17910) | 49719..49961 | + | 243 | WP_000587178.1 | hypothetical protein | - |
| MY479_RS18115 (MY479_17915) | 52215..53084 | + | 870 | WP_000041747.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| MY479_RS18120 (MY479_17920) | 53452..53871 | - | 420 | WP_000921772.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| MY479_RS18125 (MY479_17925) | 53871..54116 | - | 246 | WP_001077269.1 | ribbon-helix-helix domain-containing protein | - |
| MY479_RS18135 (MY479_17935) | 55794..56006 | + | 213 | WP_000447737.1 | hypothetical protein | - |
| MY479_RS18140 (MY479_17940) | 56055..56471 | + | 417 | WP_000402981.1 | hypothetical protein | - |
| MY479_RS18145 (MY479_17945) | 56823..57059 | + | 237 | WP_000443825.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| MY479_RS18150 (MY479_17950) | 57053..57397 | + | 345 | WP_025177725.1 | endoribonuclease MazF | Toxin Detail |
| MY479_RS18160 (MY479_17960) | 58656..58967 | - | 312 | WP_002188299.1 | hypothetical protein | - |
| MY479_RS18165 (MY479_17965) | 60071..61198 | + | 1128 | Protein_45 | IS3 family transposase IS1501 | Transposase |
| MY479_RS18170 (MY479_17970) | 61221..61754 | - | 534 | WP_002188141.1 | Serine acetyltransferase | VF |
| MY479_RS18175 (MY479_17975) | 62079..62249 | + | 171 | WP_002188134.1 | hypothetical protein | - |
| MY479_RS18180 (MY479_17980) | 62757..63173 | - | 417 | WP_000795145.1 | hypothetical protein | - |
| MY479_RS18185 (MY479_17985) | 63348..63764 | - | 417 | WP_001181766.1 | PIN domain-containing protein | - |
| MY479_RS18190 (MY479_17990) | 63742..64002 | - | 261 | WP_000609188.1 | ribbon-helix-helix domain-containing protein | - |
| MY479_RS18195 (MY479_17995) | 64110..64583 | - | 474 | WP_000878572.1 | hypothetical protein | - |
| MY479_RS18200 (MY479_18000) | 64929..65099 | + | 171 | WP_002713570.1 | hypothetical protein | - |
| MY479_RS18205 (MY479_18005) | 65073..65171 | - | 99 | Protein_53 | IS3 family transposase | - |
| MY479_RS18210 (MY479_18010) | 65389..65799 | - | 411 | WP_000409550.1 | hypothetical protein | - |
| MY479_RS18215 (MY479_18015) | 65882..66421 | - | 540 | WP_002080723.1 | hypothetical protein | - |
| MY479_RS18220 (MY479_18020) | 68114..68526 | + | 413 | Protein_56 | IS481 family transposase ISGdi10 | Transposase |
| MY479_RS18225 (MY479_18025) | 68927..69832 | + | 906 | WP_223813940.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| MY479_RS18230 (MY479_18030) | 70364..70627 | - | 264 | WP_000830369.1 | hypothetical protein | - |
| MY479_RS18235 (MY479_18035) | 70674..71195 | - | 522 | WP_001058386.1 | hypothetical protein | - |
| MY479_RS18240 (MY479_18040) | 71935..72381 | - | 447 | WP_000445079.1 | GNAT family N-acetyltransferase | - |
| MY479_RS18245 (MY479_18045) | 72713..72952 | - | 240 | WP_000833998.1 | antitoxin | - |
| MY479_RS18250 (MY479_18050) | 72942..73244 | - | 303 | WP_002188495.1 | nucleotidyltransferase domain-containing protein | - |
| MY479_RS18255 | 73611..73736 | - | 126 | WP_001972665.1 | hypothetical protein | - |
| MY479_RS18260 (MY479_18055) | 73723..74046 | - | 324 | WP_002078026.1 | hypothetical protein | - |
| MY479_RS18265 (MY479_18060) | 74327..74734 | - | 408 | WP_002188494.1 | PIN domain-containing protein | - |
| MY479_RS18270 (MY479_18065) | 74776..75075 | - | 300 | WP_000835630.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| MY479_RS18275 (MY479_18070) | 75277..75375 | - | 99 | Protein_67 | IS3 family transposase | - |
| MY479_RS18280 (MY479_18075) | 75554..76701 | + | 1148 | WP_100219858.1 | IS3 family transposase IS1500B | Transposase |
| MY479_RS18285 (MY479_18080) | 77540..77695 | - | 156 | WP_001976969.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| MY479_RS18290 (MY479_18085) | 77916..78929 | - | 1014 | WP_000427241.1 | hypothetical protein | - |
| MY479_RS18295 (MY479_18090) | 79117..79725 | - | 609 | WP_225740551.1 | hypothetical protein | - |
| MY479_RS18300 (MY479_18095) | 81466..82080 | + | 615 | WP_000018408.1 | hypothetical protein | - |
| MY479_RS18305 (MY479_18100) | 82098..83006 | + | 909 | WP_002188662.1 | histidine kinase N-terminal 7TM domain-containing protein | - |
| MY479_RS18310 (MY479_18105) | 83023..83424 | - | 402 | WP_000421222.1 | transcriptional regulator | - |
| MY479_RS18315 (MY479_18110) | 83847..84074 | + | 228 | WP_000236475.1 | hypothetical protein | - |
| MY479_RS18320 (MY479_18115) | 84093..85286 | + | 1194 | WP_000033054.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|