MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 63122 bp
Accession: NZ_CP095859 Location: 1..63122 Organism: Escherichia coli strain EC6563 Replicon: plasmid pEC6563-3
Accession: NZ_CP095859 Location: 1..63122 Organism: Escherichia coli strain EC6563 Replicon: plasmid pEC6563-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYG04_RS25325 (MYG04_25325) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| MYG04_RS25330 (MYG04_25330) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| MYG04_RS25335 (MYG04_25335) | 2124..2306 | - | 183 | WP_042344623.1 | hypothetical protein | - |
| MYG04_RS25340 (MYG04_25340) | 2373..2662 | - | 290 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MYG04_RS25345 (MYG04_25345) | 2649..2917 | - | 269 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
| MYG04_RS25355 (MYG04_25355) | 4785..5954 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| MYG04_RS25360 (MYG04_25360) | 5987..6115 | + | 129 | Protein_7 | IS481 family transposase | - |
| MYG04_RS25365 (MYG04_25365) | 6240..6443 | - | 204 | Protein_8 | hypothetical protein | - |
| MYG04_RS25370 (MYG04_25370) | 6520..7217 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| MYG04_RS25375 (MYG04_25375) | 7232..8395 | + | 1164 | Protein_10 | IS4 family transposase IS10R | Transposase |
| MYG04_RS25380 (MYG04_25380) | 8405..8821 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| MYG04_RS25385 (MYG04_25385) | 8909..9502 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| MYG04_RS25390 (MYG04_25390) | 9615..10820 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| MYG04_RS25395 (MYG04_25395) | 10902..11525 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| MYG04_RS25400 (MYG04_25400) | 11503..12189 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| MYG04_RS25405 (MYG04_25405) | 12197..12583 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| MYG04_RS25410 (MYG04_25410) | 12576..12839 | - | 264 | WP_049802299.1 | antibiotic biosynthesis monooxygenase | - |
| MYG04_RS25420 (MYG04_25420) | 13782..14183 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| MYG04_RS25425 (MYG04_25425) | 14116..14373 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| MYG04_RS25430 (MYG04_25430) | 14466..15119 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| MYG04_RS25435 (MYG04_25435) | 16333..16545 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| MYG04_RS25440 (MYG04_25440) | 16676..17038 | - | 363 | Protein_23 | fertility inhibition protein FinO | - |
| MYG04_RS25445 (MYG04_25445) | 17034..20285 | - | 3252 | Protein_24 | Multifunctional conjugation protein TraI | Relaxase |
| MYG04_RS25450 (MYG04_25450) | 20285..22021 | - | 1737 | WP_247777733.1 | type IV conjugative transfer system coupling protein TraD | - |
| MYG04_RS25455 (MYG04_25455) | 22005..23669 | - | 1665 | Protein_26 | conjugal transfer mating-pair stabilization protein TraG | - |
| MYG04_RS25460 (MYG04_25460) | 23749..24201 | - | 453 | Protein_27 | DNA methyltransferase | - |
| MYG04_RS25465 (MYG04_25465) | 24278..24589 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| MYG04_RS25470 (MYG04_25470) | 24586..25488 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| MYG04_RS25475 (MYG04_25475) | 26355..27326 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| MYG04_RS25480 (MYG04_25480) | 27326..28492 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| MYG04_RS25485 (MYG04_25485) | 29080..29835 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| MYG04_RS25490 (MYG04_25490) | 30609..31415 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| MYG04_RS25495 (MYG04_25495) | 31416..31721 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| MYG04_RS25500 (MYG04_25500) | 31723..31941 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| MYG04_RS25505 (MYG04_25505) | 32532..33020 | + | 489 | WP_011254646.1 | hypothetical protein | - |
| MYG04_RS25510 (MYG04_25510) | 33054..34187 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| MYG04_RS25515 (MYG04_25515) | 34354..35127 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| MYG04_RS25520 (MYG04_25520) | 35140..35640 | - | 501 | WP_000528931.1 | HEPN family nuclease | - |
| MYG04_RS25525 (MYG04_25525) | 35905..36135 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| MYG04_RS25530 (MYG04_25530) | 36132..36548 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MYG04_RS25535 (MYG04_25535) | 36593..40387 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| MYG04_RS25540 (MYG04_25540) | 40768..40998 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| MYG04_RS25545 (MYG04_25545) | 40995..41411 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MYG04_RS25550 (MYG04_25550) | 41486..43051 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| MYG04_RS25555 (MYG04_25555) | 43036..44058 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| MYG04_RS25565 (MYG04_25565) | 45365..46279 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| MYG04_RS25570 (MYG04_25570) | 46279..47106 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| MYG04_RS25575 (MYG04_25575) | 47103..47960 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| MYG04_RS25580 (MYG04_25580) | 47957..48814 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| MYG04_RS25585 (MYG04_25585) | 49048..49305 | - | 258 | Protein_52 | Tn3 family transposase | - |
| MYG04_RS25590 (MYG04_25590) | 49303..49716 | + | 414 | Protein_53 | phosphopyruvate hydratase | - |
| MYG04_RS25595 (MYG04_25595) | 50057..50437 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| MYG04_RS25600 (MYG04_25600) | 50817..52010 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| MYG04_RS25605 (MYG04_25605) | 52146..53870 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| MYG04_RS25610 (MYG04_25610) | 53871..54818 | + | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| MYG04_RS25615 (MYG04_25615) | 54818..56560 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| MYG04_RS25620 (MYG04_25620) | 56557..57890 | + | 1334 | Protein_59 | L-lysine N6-monooxygenase | VF |
| MYG04_RS25625 (MYG04_25625) | 57916..60117 | + | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| MYG04_RS25630 (MYG04_25630) | 60497..61194 | + | 698 | WP_223155668.1 | IS1-like element IS1A family transposase | - |
| MYG04_RS25635 (MYG04_25635) | 61374..61887 | - | 514 | Protein_62 | DUF4113 domain-containing protein | - |
| MYG04_RS25640 (MYG04_25640) | 61948..62052 | - | 105 | Protein_63 | AAA family ATPase | - |
| MYG04_RS25645 (MYG04_25645) | 62054..62377 | - | 324 | Protein_64 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|