MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 154055 bp
Accession: NZ_CP095845 Location: 1724898..1878952 Organism: Sphingopyxis sp. GC21 Replicon: chromosome
Accession: NZ_CP095845 Location: 1724898..1878952 Organism: Sphingopyxis sp. GC21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MU856_RS08230 | 1720203..1721510 | + | 1308 | WP_263588806.1 | TraB/VirB10 family protein | - |
| MU856_RS08235 | 1721510..1722133 | + | 624 | WP_263588807.1 | TraV family lipoprotein | - |
| MU856_RS08240 | 1722160..1724646 | + | 2487 | WP_263588965.1 | TraC family protein | - |
| MU856_RS08245 | 1724633..1724953 | + | 321 | WP_263588966.1 | hypothetical protein | - |
| MU856_RS08250 | 1724950..1725777 | + | 828 | WP_263588808.1 | hypothetical protein | - |
| MU856_RS08255 | 1725774..1726010 | + | 237 | WP_263588809.1 | hypothetical protein | - |
| MU856_RS08260 | 1726000..1726683 | + | 684 | WP_263588810.1 | conjugal transfer protein TraW | - |
| MU856_RS08265 | 1726728..1727258 | - | 531 | WP_263588811.1 | GNAT family N-acetyltransferase | - |
| MU856_RS08270 | 1727274..1727582 | - | 309 | WP_263588812.1 | DUF1778 domain-containing protein | - |
| MU856_RS08275 | 1727679..1728686 | + | 1008 | WP_263588967.1 | TraU family protein | - |
| MU856_RS08280 | 1728887..1729036 | + | 150 | WP_263588813.1 | hypothetical protein | - |
| MU856_RS08285 | 1729033..1730970 | + | 1938 | WP_263588814.1 | hypothetical protein | - |
| MU856_RS08290 | 1731057..1732064 | + | 1008 | WP_263588968.1 | conjugal transfer protein TraN | - |
| MU856_RS08295 | 1732036..1732959 | + | 924 | WP_263588815.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MU856_RS08300 | 1732931..1733527 | + | 597 | WP_263588816.1 | S26 family signal peptidase | - |
| MU856_RS08305 | 1733524..1734441 | + | 918 | WP_263588817.1 | conjugal transfer protein TraF | - |
| MU856_RS08310 | 1734438..1735022 | + | 585 | WP_263588818.1 | hypothetical protein | - |
| MU856_RS08315 | 1735069..1736487 | + | 1419 | WP_263588819.1 | conjugal transfer protein TraH | - |
| MU856_RS08320 | 1736503..1740273 | + | 3771 | WP_263588820.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| MU856_RS08325 | 1740260..1740724 | - | 465 | WP_263588821.1 | hypothetical protein | - |
| MU856_RS08330 | 1740768..1741244 | + | 477 | WP_263588822.1 | hypothetical protein | - |
| MU856_RS08335 | 1741367..1742140 | - | 774 | WP_263588823.1 | hypothetical protein | - |
| MU856_RS08340 | 1742394..1742894 | - | 501 | WP_263588824.1 | hypothetical protein | VF |
| MU856_RS08345 | 1742897..1743481 | - | 585 | WP_263588825.1 | restriction endonuclease | - |
| MU856_RS08350 | 1743493..1746474 | - | 2982 | WP_263588826.1 | MobF family relaxase | - |
| MU856_RS08355 | 1746471..1748552 | - | 2082 | WP_263588827.1 | type IV secretion system DNA-binding domain-containing protein | - |
| MU856_RS08360 | 1748549..1748848 | - | 300 | WP_263588828.1 | CopG family transcriptional regulator | - |
| MU856_RS08365 | 1749279..1749515 | + | 237 | WP_263588829.1 | hypothetical protein | - |
| MU856_RS08370 | 1749729..1750745 | - | 1017 | WP_263588830.1 | DUF2493 domain-containing protein | - |
| MU856_RS08375 | 1750829..1751344 | - | 516 | WP_263588831.1 | DUF736 domain-containing protein | - |
| MU856_RS08380 | 1752020..1752226 | - | 207 | WP_263588832.1 | DUF5818 domain-containing protein | - |
| MU856_RS08385 | 1752389..1752784 | + | 396 | WP_263588833.1 | hypothetical protein | - |
| MU856_RS08390 | 1753114..1753302 | + | 189 | WP_263588834.1 | hypothetical protein | - |
| MU856_RS08395 | 1753322..1753825 | - | 504 | WP_263588835.1 | hypothetical protein | - |
| MU856_RS08400 | 1754100..1754312 | - | 213 | WP_263588836.1 | hypothetical protein | - |
| MU856_RS08405 | 1754361..1754768 | - | 408 | WP_263588837.1 | type II toxin-antitoxin system VapC family toxin | - |
| MU856_RS08410 | 1754772..1755029 | - | 258 | WP_263588838.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| MU856_RS08415 | 1755318..1756184 | - | 867 | WP_263588969.1 | hypothetical protein | - |
| MU856_RS08420 | 1756283..1756789 | - | 507 | WP_263588839.1 | hypothetical protein | - |
| MU856_RS08425 | 1756920..1757108 | - | 189 | WP_263588840.1 | hypothetical protein | - |
| MU856_RS08430 | 1757159..1757371 | - | 213 | WP_263588841.1 | hypothetical protein | - |
| MU856_RS08435 | 1757368..1757799 | - | 432 | WP_263588842.1 | hypothetical protein | - |
| MU856_RS08440 | 1757877..1759577 | - | 1701 | WP_263588843.1 | ATP-binding protein | - |
| MU856_RS08445 | 1759636..1759974 | - | 339 | WP_263588844.1 | hypothetical protein | - |
| MU856_RS08450 | 1760002..1760460 | - | 459 | WP_263588845.1 | hypothetical protein | - |
| MU856_RS08455 | 1760490..1761137 | - | 648 | WP_263588846.1 | hypothetical protein | - |
| MU856_RS08460 | 1761213..1761662 | - | 450 | WP_263588847.1 | hypothetical protein | - |
| MU856_RS08465 | 1761718..1762779 | - | 1062 | WP_263588848.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| MU856_RS08470 | 1763113..1763382 | - | 270 | WP_263588849.1 | prevent-host-death protein | - |
| MU856_RS08475 | 1763431..1763616 | - | 186 | WP_263588850.1 | hypothetical protein | - |
| MU856_RS08480 | 1763613..1763936 | - | 324 | WP_263588851.1 | hypothetical protein | - |
| MU856_RS08485 | 1763933..1764295 | - | 363 | WP_263588852.1 | hypothetical protein | - |
| MU856_RS08490 | 1764474..1764668 | - | 195 | WP_263588853.1 | hypothetical protein | - |
| MU856_RS08495 | 1764774..1765481 | - | 708 | WP_263588854.1 | hypothetical protein | - |
| MU856_RS08500 | 1765613..1765834 | - | 222 | WP_263588855.1 | hypothetical protein | - |
| MU856_RS08505 | 1765997..1767199 | - | 1203 | WP_263588856.1 | DUF945 domain-containing protein | - |
| MU856_RS08510 | 1767437..1768195 | - | 759 | WP_263588857.1 | STAS/SEC14 domain-containing protein | - |
| MU856_RS08515 | 1768438..1768950 | + | 513 | WP_263588970.1 | MucR family transcriptional regulator | - |
| MU856_RS08520 | 1768947..1769345 | + | 399 | WP_263588858.1 | nuclease | - |
| MU856_RS08525 | 1769531..1770061 | + | 531 | WP_263588859.1 | hypothetical protein | - |
| MU856_RS08530 | 1770096..1770500 | + | 405 | WP_263588860.1 | hypothetical protein | - |
| MU856_RS08535 | 1770580..1771110 | + | 531 | WP_263588861.1 | DUF2244 domain-containing protein | - |
| MU856_RS08540 | 1771308..1771793 | + | 486 | WP_263588862.1 | copper chaperone PCu(A)C | - |
| MU856_RS08545 | 1771780..1772433 | + | 654 | WP_263588863.1 | SCO family protein | - |
| MU856_RS08550 | 1772461..1774557 | + | 2097 | WP_263588864.1 | TonB-dependent receptor | - |
| MU856_RS08555 | 1774571..1775452 | + | 882 | WP_263588865.1 | DJ-1/PfpI family protein | - |
| MU856_RS08560 | 1775707..1776003 | - | 297 | WP_263588866.1 | hypothetical protein | - |
| MU856_RS08565 | 1776278..1776529 | + | 252 | WP_263588867.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| MU856_RS08570 | 1776529..1776951 | + | 423 | WP_263588971.1 | type II toxin-antitoxin system VapC family toxin | - |
| MU856_RS08575 | 1777080..1777913 | + | 834 | WP_263588868.1 | hypothetical protein | - |
| MU856_RS08580 | 1778112..1778339 | - | 228 | WP_263588869.1 | hypothetical protein | - |
| MU856_RS08585 | 1778339..1779973 | - | 1635 | WP_263588870.1 | IS66 family transposase IS66 | Transposase |
| MU856_RS08590 | 1780033..1780374 | - | 342 | WP_263588871.1 | IS66 family transposase ISAzs20 | Transposase |
| MU856_RS08595 | 1780371..1780727 | - | 357 | WP_263588872.1 | transposase | - |
| MU856_RS08600 | 1780880..1781740 | - | 861 | WP_263588873.1 | DNA-binding protein | - |
| MU856_RS08605 | 1781937..1782200 | - | 264 | WP_263588874.1 | type II toxin-antitoxin system VapC family toxin | - |
| MU856_RS08610 | 1782349..1782603 | - | 255 | WP_263588875.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| MU856_RS08615 | 1782714..1786922 | - | 4209 | WP_263588876.1 | strawberry notch family protein | - |
| MU856_RS08620 | 1787124..1789199 | - | 2076 | WP_263588877.1 | ParB/RepB/Spo0J family partition protein | - |
| MU856_RS08625 | 1789398..1789592 | + | 195 | WP_263588878.1 | hypothetical protein | VF |
| MU856_RS08630 | 1789599..1790510 | - | 912 | WP_263588879.1 | toprim domain-containing protein | - |
| MU856_RS08635 | 1790698..1790973 | + | 276 | WP_263588972.1 | HU family DNA-binding protein | - |
| MU856_RS08640 | 1791102..1793243 | - | 2142 | WP_263588880.1 | TonB-dependent receptor | - |
| MU856_RS08645 | 1793806..1794333 | + | 528 | WP_263588881.1 | hypothetical protein | VF |
| MU856_RS08650 | 1794397..1794723 | + | 327 | WP_263588882.1 | hypothetical protein | - |
| MU856_RS08655 | 1794765..1795238 | + | 474 | WP_263588883.1 | hypothetical protein | - |
| MU856_RS08660 | 1795235..1795381 | - | 147 | WP_263588884.1 | hypothetical protein | - |
| MU856_RS08665 | 1795403..1796194 | + | 792 | WP_263588973.1 | JAB domain-containing protein | - |
| MU856_RS08670 | 1796622..1797149 | - | 528 | WP_263588885.1 | GNAT family N-acetyltransferase | Toxin Detail |
| MU856_RS08675 | 1797146..1797424 | - | 279 | WP_263588886.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| MU856_RS08680 | 1797480..1797725 | - | 246 | WP_263588887.1 | hypothetical protein | - |
| MU856_RS08685 | 1797915..1798160 | + | 246 | WP_263588888.1 | helix-turn-helix transcriptional regulator | - |
| MU856_RS08690 | 1798494..1799021 | + | 528 | WP_263588889.1 | MbcA/ParS/Xre antitoxin family protein | - |
| MU856_RS08695 | 1799018..1799689 | + | 672 | WP_263588890.1 | RES family NAD+ phosphorylase | - |
| MU856_RS08700 | 1799741..1799884 | + | 144 | WP_263588891.1 | hypothetical protein | - |
| MU856_RS08705 | 1800005..1800226 | - | 222 | WP_263588892.1 | Blue-light-activated protein | VF |
| MU856_RS08710 | 1800253..1800438 | + | 186 | WP_263588893.1 | hypothetical protein | - |
| MU856_RS08715 | 1800826..1801083 | - | 258 | WP_263588974.1 | DUF6429 family protein | - |
| MU856_RS08720 | 1801210..1801611 | - | 402 | WP_263588894.1 | hypothetical protein | - |
| MU856_RS08725 | 1801608..1802963 | - | 1356 | WP_263588895.1 | GGDEF domain-containing protein | - |
| MU856_RS08730 | 1803698..1804525 | + | 828 | WP_263588896.1 | caspase family protein | - |
| MU856_RS08735 | 1804727..1805611 | + | 885 | WP_263588897.1 | hypothetical protein | - |
| MU856_RS08740 | 1805640..1807067 | + | 1428 | WP_263588898.1 | S8 family peptidase | - |
| MU856_RS08745 | 1807125..1808177 | - | 1053 | WP_263588899.1 | PIN domain-containing protein | - |
| MU856_RS08750 | 1808268..1808882 | - | 615 | WP_263588900.1 | toxin-activating lysine-acyltransferase | - |
| MU856_RS08755 | 1809483..1810109 | + | 627 | WP_263588901.1 | hypothetical protein | - |
| MU856_RS08760 | 1811554..1842264 | + | 30711 | WP_263588902.1 | Bifunctional hemolysin/adenylate cyclase | VF |
| MU856_RS08765 | 1842354..1842638 | + | 285 | WP_263588903.1 | DUF1778 domain-containing protein | - |
| MU856_RS08770 | 1842732..1842980 | + | 249 | WP_263588904.1 | DUF4160 domain-containing protein | - |
| MU856_RS08775 | 1842967..1843380 | + | 414 | WP_263588905.1 | DUF2442 domain-containing protein | - |
| MU856_RS08780 | 1843752..1845383 | + | 1632 | WP_263588906.1 | TolC family outer membrane protein | - |
| MU856_RS08785 | 1845383..1847584 | + | 2202 | WP_263588907.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| MU856_RS08790 | 1847581..1848975 | + | 1395 | WP_263588908.1 | Leukotoxin export protein LtxD | VF |
| MU856_RS08795 | 1849192..1849617 | - | 426 | WP_263588909.1 | winged helix DNA-binding protein | - |
| MU856_RS08800 | 1849797..1850555 | + | 759 | WP_263588910.1 | LuxR family transcriptional regulator | - |
| MU856_RS08805 | 1850560..1851960 | - | 1401 | WP_263588911.1 | hypothetical protein ; Integrase | Integrase |
| MU856_RS08810 | 1852294..1853670 | - | 1377 | WP_263588912.1 | MFS transporter | - |
| MU856_RS08815 | 1853861..1856002 | + | 2142 | WP_263588975.1 | TonB-dependent receptor | - |
| MU856_RS08820 | 1856062..1856532 | + | 471 | WP_263588913.1 | DUF3237 domain-containing protein | - |
| MU856_RS08825 | 1856594..1857280 | - | 687 | WP_217372337.1 | Crp/Fnr family transcriptional regulator | - |
| MU856_RS08830 | 1857305..1858936 | - | 1632 | WP_263588914.1 | CTP synthase | - |
| MU856_RS08835 | 1859046..1859477 | - | 432 | WP_040589980.1 | preprotein translocase subunit SecG | - |
| MU856_RS08840 | 1859578..1860330 | - | 753 | WP_217373539.1 | triose-phosphate isomerase | - |
| MU856_RS08845 | 1860511..1862457 | + | 1947 | WP_263588915.1 | peptidylprolyl isomerase | - |
| MU856_RS08850 | 1862463..1863980 | + | 1518 | WP_263588916.1 | Anthranilate synthase component 1 | VF |
| MU856_RS08855 | 1864017..1865078 | + | 1062 | WP_263588917.1 | alpha/beta fold hydrolase | - |
| MU856_RS08860 | 1865147..1865737 | + | 591 | WP_003043867.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| MU856_RS08865 | 1865734..1866732 | + | 999 | WP_062902642.1 | anthranilate phosphoribosyltransferase | - |
| MU856_RS08870 | 1866729..1867514 | + | 786 | WP_263588918.1 | indole-3-glycerol phosphate synthase TrpC | - |
| MU856_RS08875 | 1867511..1868887 | - | 1377 | WP_217372340.1 | Non-motile and phage-resistance protein | VF |
| MU856_RS08880 | 1868884..1869798 | - | 915 | WP_263588919.1 | hypothetical protein | - |
| MU856_RS08885 | 1869857..1871071 | - | 1215 | WP_186402219.1 | hypothetical protein | - |
| MU856_RS08890 | 1871304..1874069 | + | 2766 | WP_263588920.1 | DNA gyrase subunit A | - |
| MU856_RS08895 | 1874066..1874374 | + | 309 | WP_058811416.1 | DUF952 domain-containing protein | - |
| MU856_RS08900 | 1874396..1875187 | - | 792 | WP_062902648.1 | putative 2,4-dienoyl-CoA reductase | VF |
| MU856_RS08905 | 1875306..1876172 | + | 867 | WP_186402220.1 | alpha/beta hydrolase | - |
| MU856_RS08910 | 1876218..1876946 | + | 729 | WP_263588921.1 | energy transducer TonB | - |
| MU856_RS08915 | 1877093..1879450 | + | 2358 | WP_263588922.1 | TonB-dependent receptor | - |
| MU856_RS08920 | 1879507..1880190 | + | 684 | WP_217372346.1 | Fe2+-dependent dioxygenase | - |
| MU856_RS08925 | 1880204..1881151 | - | 948 | WP_186402223.1 | FAD:protein FMN transferase | - |
| MU856_RS08930 | 1881163..1881993 | - | 831 | WP_217372347.1 | DUF4198 domain-containing protein | - |
| MU856_RS08935 | 1882011..1882541 | - | 531 | WP_263588923.1 | DUF2271 domain-containing protein | - |
| MU856_RS08940 | 1882551..1883192 | - | 642 | WP_263588924.1 | PepSY-associated TM helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|