MGE detailed information
MGE type: IScluster/Tn MGE length: 7656 bp
Accession: NZ_CP095522 Location: 43642..51297 Organism: Escherichia coli strain GN04171 Replicon: plasmid p4171-3
Accession: NZ_CP095522 Location: 43642..51297 Organism: Escherichia coli strain GN04171 Replicon: plasmid p4171-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MW404_RS24640 (39534) | 39534..40340 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| MW404_RS24645 (40341) | 40341..40646 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| MW404_RS24650 (40648) | 40648..40866 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| MW404_RS24655 (41574) | 41574..42569 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| MW404_RS24660 (42573) | 42573..43505 | + | 933 | WP_000991832.1 | S-4TM family putative pore-forming effector | - |
| MW404_RS24670 (44596) | 44596..44817 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| MW404_RS24675 (44817) | 44817..45197 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| MW404_RS24680 (45202) | 45202..45381 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| MW404_RS24685 (45409) | 45409..45687 | + | 279 | Protein_62 | pdcB | - |
| MW404_RS24690 (45692) | 45692..46105 | + | 414 | Protein_63 | IS3 family transposase ISLad1 | Transposase |
| MW404_RS24695 (46055) | 46055..46390 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| MW404_RS24700 (46600) | 46600..47580 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| MW404_RS24705 (47824) | 47824..49227 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| MW404_RS24710 (49214) | 49214..50146 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| MW404_RS24715 (50255) | 50255..50584 | - | 330 | Protein_68 | TOBE domain-containing protein | - |
| MW404_RS24725 (51376) | 51376..51603 | + | 228 | WP_013023899.1 | abortive infection family protein | - |
| MW404_RS24730 (51762) | 51762..52733 | - | 972 | Protein_71 | hypothetical protein | - |
| MW404_RS24735 (53489) | 53489..54466 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| MW404_RS24740 (54751) | 54751..55491 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| MW404_RS24745 (55612) | 55612..55800 | - | 189 | WP_001309252.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|