MGE detailed information
MGE type: Conjugative plasmid MGE length: 120616 bp
Accession: NZ_CP095504 Location: 1..120616 Organism: Escherichia coli strain GN02050 Replicon: plasmid p2050-1
Accession: NZ_CP095504 Location: 1..120616 Organism: Escherichia coli strain GN02050 Replicon: plasmid p2050-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MW398_RS00175 (1) | 1..2768 | - | 2768 | WP_268091191.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| MW398_RS00180 (2765) | 2765..4138 | - | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| MW398_RS00185 (4125) | 4125..4517 | - | 393 | WP_021537840.1 | F-type conjugal transfer protein TrbF | - |
| MW398_RS00190 (4498) | 4498..4845 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| MW398_RS00195 (4775) | 4775..5320 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MW398_RS00200 (5307) | 5307..5591 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MW398_RS00205 (5672) | 5672..6007 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| MW398_RS00210 (5988) | 5988..6329 | - | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| MW398_RS00215 (6343) | 6343..7086 | - | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MW398_RS00220 (7079) | 7079..7336 | - | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| MW398_RS00225 (7363) | 7363..9213 | - | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MW398_RS00230 (9210) | 9210..9848 | - | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MW398_RS00235 (9857) | 9857..10162 | - | 306 | WP_021537841.1 | hypothetical protein | - |
| MW398_RS00240 (10192) | 10192..11184 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| MW398_RS00245 (11181) | 11181..11813 | - | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| MW398_RS00250 (11810) | 11810..12196 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| MW398_RS00255 (12193) | 12193..14823 | - | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| MW398_RS00260 (15190) | 15190..15408 | - | 219 | WP_000556746.1 | hypothetical protein | - |
| MW398_RS00265 (15488) | 15488..15961 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| MW398_RS00270 (15954) | 15954..16175 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| MW398_RS00275 (16310) | 16310..16825 | - | 516 | WP_268091192.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MW398_RS00280 (16822) | 16822..17074 | - | 253 | Protein_21 | conjugal transfer protein TrbG | - |
| MW398_RS00285 (17067) | 17067..17387 | - | 321 | WP_001057275.1 | conjugal transfer protein TrbD | - |
| MW398_RS00290 (17374) | 17374..17964 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| MW398_RS00295 (17954) | 17954..19381 | - | 1428 | WP_000146665.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| MW398_RS00300 (19381) | 19381..20109 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| MW398_RS00305 (20096) | 20096..20662 | - | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| MW398_RS00310 (20684) | 20684..20995 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| MW398_RS00315 (21010) | 21010..21369 | - | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| MW398_RS00320 (21403) | 21403..21630 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| MW398_RS00325 (21724) | 21724..22410 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| MW398_RS00330 (22604) | 22604..22987 | - | 384 | WP_001151562.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MW398_RS00335 (23318) | 23318..23920 | + | 603 | WP_001323326.1 | hypothetical protein | VF |
| MW398_RS00340 (24216) | 24216..25037 | - | 822 | WP_001234489.1 | DUF932 domain-containing protein | - |
| MW398_RS00345 (25156) | 25156..25443 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| MW398_RS00350 (25744) | 25744..26041 | + | 298 | Protein_35 | hypothetical protein | - |
| MW398_RS00355 (26359) | 26359..26484 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| MW398_RS00360 (26426) | 26426..26575 | - | 150 | Protein_37 | DUF5431 family protein | - |
| - (26582) | 26582..26781 | - | 200 | NuclAT_0 | - | - |
| - (26582) | 26582..26781 | - | 200 | NuclAT_0 | - | - |
| - (26582) | 26582..26781 | - | 200 | NuclAT_0 | - | - |
| - (26582) | 26582..26781 | - | 200 | NuclAT_0 | - | - |
| MW398_RS00365 (26749) | 26749..27512 | - | 764 | Protein_38 | plasmid SOS inhibition protein A | - |
| MW398_RS00370 (27509) | 27509..27943 | - | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| MW398_RS00375 (27998) | 27998..29956 | - | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| MW398_RS00380 (30015) | 30015..30248 | - | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| MW398_RS00385 (30305) | 30305..30832 | - | 528 | WP_021523730.1 | single-stranded DNA-binding protein | - |
| MW398_RS00390 (31134) | 31134..31580 | + | 447 | WP_024188192.1 | hypothetical protein | - |
| MW398_RS00395 (31666) | 31666..32229 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| MW398_RS00400 (32276) | 32276..33637 | - | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| MW398_RS00405 (33689) | 33689..33919 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| MW398_RS00410 (34882) | 34882..35073 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| MW398_RS00415 (35070) | 35070..35492 | - | 423 | WP_000271708.1 | DUF1380 family protein | - |
| MW398_RS00420 (35539) | 35539..35964 | - | 426 | WP_001198903.1 | antirestriction protein | - |
| MW398_RS00425 (36380) | 36380..37150 | - | 771 | WP_021538612.1 | hypothetical protein | - |
| MW398_RS00430 (37195) | 37195..37713 | - | 519 | WP_223364201.1 | DUF1380 family protein | - |
| MW398_RS00435 (37643) | 37643..37864 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| MW398_RS00440 (37865) | 37865..38548 | - | 684 | WP_000086169.1 | DNA methylase | - |
| MW398_RS00445 (38624) | 38624..38935 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| MW398_RS00450 (38932) | 38932..39834 | - | 903 | WP_001310012.1 | DUF1281 domain-containing protein | - |
| MW398_RS00455 (40253) | 40253..41473 | - | 1221 | WP_021537820.1 | ISL3 family transposase ISEc53 | Transposase |
| MW398_RS00460 (41492) | 41492..42010 | - | 519 | WP_000115885.1 | hypothetical protein | VF |
| MW398_RS00465 (42145) | 42145..42393 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| MW398_RS00470 (42390) | 42390..42827 | + | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| MW398_RS00475 (42827) | 42827..44097 | + | 1271 | Protein_60 | translesion error-prone DNA polymerase V subunit UmuC | - |
| MW398_RS00480 (44102) | 44102..44494 | - | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| MW398_RS00485 (44499) | 44499..45470 | - | 972 | WP_001103694.1 | plasmid segregation protein ParM | - |
| MW398_RS00490 (45699) | 45699..46343 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| MW398_RS00495 (46337) | 46337..46612 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| MW398_RS00500 (46750) | 46750..47559 | - | 810 | WP_000016979.1 | site-specific integrase | - |
| MW398_RS00505 (47560) | 47560..47865 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| MW398_RS00510 (47867) | 47867..48085 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| MW398_RS00515 (50407) | 50407..51048 | + | 642 | WP_021537822.1 | hypothetical protein | - |
| MW398_RS00520 (51288) | 51288..51668 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| MW398_RS00525 (51665) | 51665..52012 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| MW398_RS00530 (52062) | 52062..53600 | + | 1539 | WP_021542005.1 | IS66 family transposase ISEc8 | Transposase |
| MW398_RS00535 (53739) | 53739..53846 | + | 108 | WP_001309726.1 | IS66 family transposase | - |
| MW398_RS00540 (54919) | 54919..55896 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| MW398_RS00545 (56139) | 56139..56879 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| MW398_RS00550 (57000) | 57000..57188 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| MW398_RS00555 (57555) | 57555..58724 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| MW398_RS00560 (58950) | 58950..59125 | - | 176 | Protein_77 | IS3 family transposase | - |
| MW398_RS00565 (59571) | 59571..59843 | - | 273 | WP_001322642.1 | Major pilu subunit operon regulatory protein PapB | VF |
| MW398_RS00570 (60380) | 60380..60804 | - | 425 | Protein_79 | IS3 family transposase IS2 | Transposase |
| MW398_RS00575 (61086) | 61086..63056 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| MW398_RS00580 (63063) | 63063..63854 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| MW398_RS00585 (63917) | 63917..64126 | - | 210 | Protein_82 | IS66 family transposase ISKpn24 | Transposase |
| MW398_RS00590 (64219) | 64219..64644 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| MW398_RS00595 (64641) | 64641..64991 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| MW398_RS00600 (65022) | 65022..66635 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| MW398_RS00605 (66670) | 66670..67065 | - | 396 | Protein_86 | IS66 family transposase ISEc22 | Transposase |
| MW398_RS00610 (67133) | 67133..67915 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| MW398_RS00615 (67912) | 67912..68934 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| MW398_RS00620 (69020) | 69020..69955 | - | 936 | Protein_89 | IS66 family transposase ISEc22 | Transposase |
| MW398_RS00625 (70004) | 70004..70351 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| MW398_RS00630 (70348) | 70348..70752 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| MW398_RS00635 (70832) | 70832..71170 | - | 339 | Protein_92 | IS3 family transposase IS629 | Transposase |
| MW398_RS00640 (71254) | 71254..72762 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| MW398_RS00645 (73435) | 73435..74174 | - | 740 | Protein_94 | IS3 family transposase IS629 | Transposase |
| MW398_RS00650 (74276) | 74276..74536 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| MW398_RS00655 (74533) | 74533..75042 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| MW398_RS00660 (75062) | 75062..75409 | - | 348 | WP_000142452.1 | DUF6404 family protein | - |
| MW398_RS00665 (75538) | 75538..75873 | + | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| MW398_RS00670 (77325) | 77325..78011 | + | 687 | Protein_99 | replication initiation protein | - |
| MW398_RS00675 (78343) | 78343..79218 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| MW398_RS00680 (79226) | 79226..80002 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| MW398_RS00685 (80171) | 80171..82432 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| MW398_RS00690 (82501) | 82501..83676 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| MW398_RS00695 (84199) | 84199..84504 | - | 306 | Protein_104 | IS91 family transposase ISSbo1 | Transposase |
| MW398_RS00700 (84530) | 84530..84933 | + | 404 | Protein_105 | IS3 family transposase IS629 | Transposase |
| MW398_RS00705 (84998) | 84998..85753 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| MW398_RS00710 (85750) | 85750..87249 | - | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| MW398_RS00715 (87335) | 87335..87685 | + | 351 | Protein_108 | IS3 family transposase IS629 | Transposase |
| MW398_RS00720 (88358) | 88358..89866 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| MW398_RS00725 (89950) | 89950..90429 | + | 480 | Protein_110 | IS3 family transposase IS629 | Transposase |
| MW398_RS00730 (90432) | 90432..91001 | - | 570 | WP_001336919.1 | Serine protease EspC | VF |
| MW398_RS00735 (91103) | 91103..92082 | + | 980 | Protein_112 | IS5 family transposase ISKpn26 | Transposase |
| MW398_RS00740 (92232) | 92232..92864 | - | 633 | Protein_113 | histidine-type phosphatase | - |
| MW398_RS00745 (92986) | 92986..93471 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| MW398_RS00750 (93496) | 93496..93981 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| MW398_RS00755 (93968) | 93968..94663 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| MW398_RS00760 (94668) | 94668..95798 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| MW398_RS00765 (95788) | 95788..97071 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| MW398_RS00770 (97074) | 97074..98453 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| MW398_RS00775 (98557) | 98557..99084 | - | 528 | WP_000178050.1 | iron transporter | - |
| MW398_RS00780 (99125) | 99125..101011 | - | 1887 | WP_001332815.1 | FTR1 family protein | - |
| MW398_RS00785 (101358) | 101358..102173 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| MW398_RS00790 (102356) | 102356..102862 | - | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| MW398_RS00795 (102852) | 102852..103022 | - | 171 | Protein_124 | DsbA family protein | - |
| MW398_RS00800 (103109) | 103109..103813 | - | 705 | WP_001067838.1 | IS6 family transposase IS26 | Transposase |
| MW398_RS00805 (104869) | 104869..105726 | - | 858 | WP_021537839.1 | incFII family plasmid replication initiator RepA | - |
| MW398_RS00810 (105719) | 105719..105793 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| MW398_RS00815 (106026) | 106026..106286 | - | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| MW398_RS00820 (106526) | 106526..107116 | - | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| MW398_RS00825 (107154) | 107154..107363 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| MW398_RS00830 (107409) | 107409..107870 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| MW398_RS00835 (108115) | 108115..108327 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| MW398_RS00840 (108456) | 108456..109016 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| MW398_RS00845 (109119) | 109119..109979 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| MW398_RS00850 (110038) | 110038..110784 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| MW398_RS00855 (110804) | 110804..116074 | - | 5271 | WP_000948349.1 | Multifunctional conjugation protein TraI | Relaxase |
| MW398_RS00860 (116074) | 116074..118290 | - | 2217 | WP_001546806.1 | type IV conjugative transfer system coupling protein TraD | - |
| MW398_RS00865 (118341) | 118341..119078 | - | 738 | WP_000199901.1 | hypothetical protein | - |
| MW398_RS00870 (119281) | 119281..120012 | - | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| MW398_RS00875 (120061) | 120061..120546 | - | 486 | WP_000605869.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|