MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 57300 bp
Accession: NZ_CP095162 Location: 873548..930847 Organism: Streptococcus suis strain TJS75 Replicon: chromosome
Accession: NZ_CP095162 Location: 873548..930847 Organism: Streptococcus suis strain TJS75 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUY23_RS04380 | 869355..869849 | - | 495 | WP_024380860.1 | PcfB family protein | - |
| MUY23_RS04385 | 869839..872391 | - | 2553 | WP_172078108.1 | G5 domain-containing protein | - |
| MUY23_RS04390 | 872388..873278 | - | 891 | WP_172078120.1 | DUF6017 domain-containing protein | - |
| MUY23_RS04395 | 873548..874747 | - | 1200 | WP_002935040.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| MUY23_RS04400 | 874770..874997 | - | 228 | WP_001258320.1 | DUF3173 family protein | - |
| MUY23_RS04405 | 875275..875499 | - | 225 | WP_002935042.1 | helix-turn-helix transcriptional regulator | - |
| MUY23_RS04410 | 875665..876399 | - | 735 | WP_002935043.1 | ABC transporter permease | - |
| MUY23_RS04415 | 876383..877147 | - | 765 | WP_002935044.1 | ABC transporter permease | - |
| MUY23_RS04420 | 877149..878057 | - | 909 | WP_002935046.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| MUY23_RS04425 | 878167..879213 | - | 1047 | WP_002935047.1 | ATP-binding cassette domain-containing protein | - |
| MUY23_RS04430 | 879294..879449 | - | 156 | WP_002935048.1 | lacticin 481 family lantibiotic | - |
| MUY23_RS04435 | 879478..879633 | - | 156 | WP_002935049.1 | lacticin 481 family lantibiotic | - |
| MUY23_RS04440 | 879988..880686 | + | 699 | WP_002935052.1 | Sensory transduction protein regX3 | VF |
| MUY23_RS04445 | 880702..882057 | + | 1356 | WP_002935054.1 | HAMP domain-containing sensor histidine kinase | - |
| MUY23_RS04450 | 882180..884039 | - | 1860 | WP_002935056.1 | SAG1250 family conjugative relaxase | - |
| MUY23_RS04455 | 884026..884391 | - | 366 | WP_002935058.1 | plasmid mobilization relaxosome protein MobC | - |
| MUY23_RS04460 | 884401..884760 | - | 360 | WP_002935059.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| MUY23_RS04465 | 885095..887602 | - | 2508 | WP_053866460.1 | AAA family ATPase | - |
| MUY23_RS04470 | 887638..888405 | - | 768 | WP_002935066.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| MUY23_RS04475 | 888405..888881 | - | 477 | WP_002935067.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| MUY23_RS04480 | 888951..889241 | - | 291 | WP_002935069.1 | hypothetical protein | - |
| MUY23_RS04485 | 889291..889680 | - | 390 | WP_002935071.1 | DUF5945 family protein | - |
| MUY23_RS04490 | 889677..889904 | - | 228 | WP_002935073.1 | DUF5965 family protein | - |
| MUY23_RS04495 | 889958..891034 | - | 1077 | WP_029187303.1 | toprim domain-containing protein | - |
| MUY23_RS04500 | 891097..892953 | - | 1857 | WP_001820670.1 | IS607 family transposase ISNma20 | Transposase |
| MUY23_RS04505 | 893008..893271 | - | 264 | WP_000253176.1 | hypothetical protein | - |
| MUY23_RS04510 | 893271..893501 | - | 231 | WP_001206986.1 | PC4/YdbC family ssDNA-binding protein | - |
| MUY23_RS04515 | 893547..894401 | - | 855 | WP_000743700.1 | ParB/RepB/Spo0J family partition protein | - |
| MUY23_RS04520 | 894410..895375 | - | 966 | WP_001820668.1 | MobV family relaxase | - |
| MUY23_RS04525 | 895900..896925 | - | 1026 | WP_001170964.1 | AAA family ATPase | - |
| MUY23_RS04530 | 897177..897293 | - | 117 | Protein_882 | RNA polymerase subunit sigma | - |
| MUY23_RS04535 | 897384..897554 | - | 171 | WP_000331638.1 | hypothetical protein | - |
| MUY23_RS04540 | 897638..898063 | - | 426 | WP_000323895.1 | sigma-70 family RNA polymerase sigma factor | - |
| MUY23_RS04545 | 898158..898670 | - | 513 | WP_000241709.1 | sigma-70 family RNA polymerase sigma factor | - |
| MUY23_RS04550 | 899158..899328 | - | 171 | WP_004614788.1 | cysteine-rich KTR domain-containing protein | - |
| MUY23_RS04555 | 899383..901302 | - | 1920 | WP_000691758.1 | Tetracycline resistance protein TetO | VF |
| MUY23_RS04560 | 901674..902048 | - | 375 | WP_001129922.1 | TnpV protein | - |
| MUY23_RS04565 | 901988..902719 | - | 732 | WP_002935082.1 | hypothetical protein | - |
| MUY23_RS04570 | 902815..903105 | - | 291 | WP_024394788.1 | DUF5966 family protein | - |
| MUY23_RS04575 | 903119..903418 | - | 300 | WP_002935086.1 | DUF5962 family protein | - |
| MUY23_RS04580 | 903489..904877 | - | 1389 | Protein_892 | helicase C-terminal domain-containing protein | - |
| MUY23_RS04585 | 904970..906748 | - | 1779 | WP_024402041.1 | reverse transcriptase/maturase family protein | - |
| MUY23_RS04590 | 907246..912708 | - | 5463 | WP_172094308.1 | SNF2-related protein | - |
| MUY23_RS04595 | 912758..913309 | - | 552 | WP_024401252.1 | hypothetical protein | - |
| MUY23_RS04600 | 913293..913484 | - | 192 | WP_001068447.1 | hypothetical protein | - |
| MUY23_RS04605 | 913485..918380 | - | 4896 | WP_245133675.1 | Agglutinin receptor | VF |
| MUY23_RS04610 | 918661..919251 | + | 591 | WP_024401254.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| MUY23_RS04615 | 919248..920093 | + | 846 | WP_024383472.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| MUY23_RS04620 | 920155..922956 | - | 2802 | WP_024394478.1 | phage tail tip lysozyme | - |
| MUY23_RS04625 | 922958..925309 | - | 2352 | WP_245133643.1 | AAA family ATPase | - |
| MUY23_RS04630 | 925266..925619 | - | 354 | WP_024381325.1 | PrgI family protein | - |
| MUY23_RS04635 | 925681..926535 | - | 855 | WP_024401257.1 | conjugal transfer protein TrbL | - |
| MUY23_RS04640 | 926553..926795 | - | 243 | WP_001072182.1 | hypothetical protein | - |
| MUY23_RS04645 | 926813..928630 | - | 1818 | WP_024381326.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MUY23_RS04650 | 928630..929118 | - | 489 | WP_002936460.1 | hypothetical protein | - |
| MUY23_RS04655 | 929196..929780 | - | 585 | WP_053866449.1 | CPBP family intramembrane metalloprotease | - |
| MUY23_RS04660 | 929783..930016 | - | 234 | WP_014636637.1 | hypothetical protein | - |
| MUY23_RS04665 | 930025..930408 | - | 384 | WP_053866448.1 | arsenate reductase | - |
| MUY23_RS04670 | 930419..930847 | - | 429 | WP_053866447.1 | hypothetical protein | - |
| MUY23_RS04675 | 930831..932186 | - | 1356 | WP_053866446.1 | DNA (cytosine-5-)-methyltransferase | - |
| MUY23_RS04680 | 932335..933153 | - | 819 | WP_024401260.1 | replication initiator protein A | - |
| MUY23_RS04685 | 933156..933323 | - | 168 | WP_032499127.1 | hypothetical protein | - |
| MUY23_RS04690 | 933524..933889 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| MUY23_RS04695 | 933955..934449 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|