MGE detailed information
MGE type: Mobilizable plasmid MGE length: 64118 bp
Accession: NZ_CP095128 Location: 1..64118 Organism: Escherichia coli strain Iso00270 Replicon: plasmid pIso00270_03
Accession: NZ_CP095128 Location: 1..64118 Organism: Escherichia coli strain Iso00270 Replicon: plasmid pIso00270_03
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MU416_RS23575 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| MU416_RS23580 (1263) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| MU416_RS23585 (2124) | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| MU416_RS23590 (2373) | 2373..2662 | - | 290 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MU416_RS23595 (2649) | 2649..2917 | - | 269 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
| MU416_RS23600 (3449) | 3449..4618 | + | 1170 | WP_023909118.1 | hypothetical protein | - |
| MU416_RS23605 (4651) | 4651..4779 | + | 129 | Protein_6 | IS481 family transposase | - |
| MU416_RS23610 (4814) | 4814..5002 | - | 189 | Protein_7 | hypothetical protein | - |
| MU416_RS23615 (5050) | 5050..5747 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| MU416_RS23620 (5765) | 5765..5890 | + | 126 | Protein_9 | IS4 family transposase | - |
| MU416_RS23625 (5900) | 5900..6316 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| MU416_RS23630 (6404) | 6404..6997 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| MU416_RS23635 (7110) | 7110..8315 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| MU416_RS23640 (8397) | 8397..9020 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| MU416_RS23645 (8998) | 8998..9117 | - | 120 | Protein_14 | transcriptional regulator | - |
| MU416_RS23655 (10254) | 10254..11234 | - | 981 | WP_031311978.1 | IS5 family transposase ISKpn26 | Transposase |
| MU416_RS23660 (11308) | 11308..11967 | + | 660 | WP_000412211.1 | Chloramphenicol acetyltransferase | ARG |
| MU416_RS23665 (12220) | 12220..12924 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| MU416_RS23670 (13001) | 13001..15220 | - | 2220 | Protein_19 | Tn3 family transposase TnpA_Tn3 | Transposase |
| MU416_RS23675 (15285) | 15285..15578 | + | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| MU416_RS23680 (15625) | 15625..16500 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| MU416_RS23685 (16756) | 16756..17199 | - | 444 | Protein_22 | transposase | - |
| MU416_RS23695 (17967) | 17967..18233 | - | 267 | Protein_24 | TraE/TraK family type IV conjugative transfer system protein | - |
| MU416_RS23700 (18255) | 18255..18566 | - | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| MU416_RS23705 (18571) | 18571..18933 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| MU416_RS23710 (18967) | 18967..19194 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| MU416_RS23715 (19282) | 19282..19959 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| MU416_RS23720 (20093) | 20093..20476 | - | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MU416_RS23725 (20819) | 20819..21409 | + | 591 | WP_001376243.1 | hypothetical protein | VF |
| MU416_RS23730 (21706) | 21706..22527 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| MU416_RS23735 (22646) | 22646..22933 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| MU416_RS23740 (22958) | 22958..23164 | - | 207 | WP_000275859.1 | hypothetical protein | - |
| MU416_RS23745 (23234) | 23234..23407 | + | 174 | Protein_34 | hypothetical protein | - |
| MU416_RS23750 (23405) | 23405..23635 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| MU416_RS23755 (23855) | 23855..23980 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | - |
| MU416_RS23760 (23922) | 23922..24071 | - | 150 | Protein_37 | plasmid maintenance protein Mok | - |
| - (24057) | 24057..24095 | - | 39 | NuclAT_1 | - | - |
| - (24057) | 24057..24095 | - | 39 | NuclAT_1 | - | - |
| - (24057) | 24057..24095 | - | 39 | NuclAT_1 | - | - |
| - (24057) | 24057..24095 | - | 39 | NuclAT_1 | - | - |
| - (25535) | 25535..25637 | - | 103 | NuclAT_0 | - | - |
| - (25535) | 25535..25637 | - | 103 | NuclAT_0 | - | - |
| - (25535) | 25535..25637 | - | 103 | NuclAT_0 | - | - |
| - (25535) | 25535..25637 | - | 103 | NuclAT_0 | - | - |
| MU416_RS23770 (25606) | 25606..26368 | - | 763 | Protein_39 | plasmid SOS inhibition protein A | - |
| MU416_RS23775 (26365) | 26365..26799 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| MU416_RS23780 (26868) | 26868..28891 | - | 2024 | Protein_41 | ParB/RepB/Spo0J family partition protein | - |
| MU416_RS23785 (28952) | 28952..29185 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| MU416_RS23790 (29243) | 29243..29728 | - | 486 | WP_031311812.1 | single-stranded DNA-binding protein | - |
| MU416_RS23795 (29878) | 29878..31779 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| MU416_RS23800 (32733) | 32733..33194 | + | 462 | Protein_45 | hypothetical protein | - |
| MU416_RS23805 (33280) | 33280..33843 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| MU416_RS23810 (33890) | 33890..35251 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| MU416_RS23815 (35303) | 35303..35533 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| MU416_RS23820 (36571) | 36571..36762 | - | 192 | WP_001027493.1 | hypothetical protein | - |
| MU416_RS23825 (36759) | 36759..37181 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| MU416_RS23830 (37228) | 37228..37653 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| MU416_RS23835 (38071) | 38071..38847 | - | 777 | WP_001383963.1 | hypothetical protein | - |
| MU416_RS23840 (38898) | 38898..39332 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
| MU416_RS23845 (39346) | 39346..39567 | - | 222 | WP_001104880.1 | hypothetical protein | - |
| MU416_RS23850 (39568) | 39568..40251 | - | 684 | WP_000086185.1 | DNA methylase | - |
| MU416_RS23855 (40328) | 40328..40639 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| MU416_RS23860 (40636) | 40636..41538 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| MU416_RS23865 (42405) | 42405..43376 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| MU416_RS23870 (43376) | 43376..44542 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| MU416_RS23875 (45130) | 45130..45885 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| MU416_RS23880 (46659) | 46659..47465 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| MU416_RS23885 (47466) | 47466..47771 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| MU416_RS23890 (47773) | 47773..47991 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| MU416_RS23895 (48625) | 48625..48822 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| MU416_RS23900 (48819) | 48819..49103 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| MU416_RS23905 (49123) | 49123..50256 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| MU416_RS23910 (50519) | 50519..53638 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
| MU416_RS23915 (53945) | 53945..54175 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| MU416_RS23920 (54172) | 54172..54588 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MU416_RS23925 (54750) | 54750..56888 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| MU416_RS23930 (57353) | 57353..58348 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| MU416_RS23935 (58391) | 58391..59284 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| MU416_RS23945 (60147) | 60147..61631 | - | 1485 | WP_174220535.1 | type I restriction-modification system subunit M | - |
| MU416_RS23950 (61814) | 61814..62035 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| MU416_RS23955 (62035) | 62035..62415 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| MU416_RS23960 (62420) | 62420..62599 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| MU416_RS23965 (62627) | 62627..62905 | + | 279 | Protein_78 | pdcB | - |
| MU416_RS23970 (62910) | 62910..63323 | + | 414 | Protein_79 | integrase core domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|