MGE detailed information
MGE type: IScluster/Tn MGE length: 40904 bp
Accession: NZ_CP094988 Location: 73168..114071 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: plasmid pS3160_1
Accession: NZ_CP094988 Location: 73168..114071 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: plasmid pS3160_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MT485_RS23735 (MT485_23735) | 71266..71454 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| MT485_RS23740 (MT485_23740) | 71464..72662 | + | 1199 | WP_094081567.1 | IS91 family transposase | - |
| MT485_RS23745 (MT485_23745) | 72875..73683 | + | 809 | WP_094096897.1 | IS5 family transposase ISSfl7 | Transposase |
| MT485_RS23750 (MT485_23750) | 73798..74829 | + | 1032 | WP_011114740.1 | IS630 family transposase IS630 | Transposase |
| MT485_RS23755 (MT485_23755) | 75023..75713 | + | 691 | Protein_92 | IS1 family transposase | - |
| MT485_RS23760 (MT485_23760) | 75730..75909 | - | 180 | Protein_93 | transposase | - |
| MT485_RS23765 (MT485_23765) | 76238..77935 | + | 1698 | WP_064203851.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| MT485_RS23770 (MT485_23770) | 78363..80087 | + | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| MT485_RS23775 (MT485_23775) | 80139..81347 | + | 1209 | Protein_96 | IS3 family transposase | - |
| MT485_RS23780 (MT485_23780) | 81391..81603 | - | 213 | Protein_97 | DDE-type integrase/transposase/recombinase | - |
| MT485_RS23785 (MT485_23785) | 81947..82153 | + | 207 | WP_014526562.1 | S-type pyocin domain protein | - |
| MT485_RS23790 (MT485_23790) | 82351..83715 | + | 1365 | WP_000051931.1 | MFS transporter | - |
| MT485_RS23795 (MT485_23795) | 83765..83974 | + | 210 | Protein_100 | peptidoglycan-binding protein | - |
| MT485_RS23800 (MT485_23800) | 84068..84259 | - | 192 | Protein_101 | IS21 family transposase IS100 | Transposase |
| MT485_RS23805 (MT485_23805) | 84300..84797 | - | 498 | Protein_102 | IS66 family transposase ISEc47 | Transposase |
| MT485_RS23810 (MT485_23810) | 84900..86108 | - | 1209 | Protein_103 | IS3 family transposase IS629 | Transposase |
| MT485_RS23815 (MT485_23815) | 86306..87022 | + | 717 | Protein_104 | IS21 family transposase IS100kyp | Transposase |
| MT485_RS23825 (MT485_23825) | 88586..88858 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| MT485_RS23830 (MT485_23830) | 89025..89144 | - | 120 | Protein_107 | IS66 family transposase ISCro1 | Transposase |
| MT485_RS23835 (MT485_23835) | 89261..90958 | - | 1698 | WP_024259347.1 | hypothetical protein | VF |
| MT485_RS23840 (MT485_23840) | 91034..91183 | + | 150 | Protein_109 | IS1 family transposase | - |
| MT485_RS23845 (MT485_23845) | 91287..92699 | - | 1413 | WP_001026857.1 | hypothetical protein | VF |
| MT485_RS23850 (MT485_23850) | 93149..93211 | + | 63 | Protein_111 | IS66 family transposase ISCro1 | Transposase |
| MT485_RS23855 (MT485_23855) | 93232..93453 | - | 222 | Protein_112 | IS66 family transposase ISCro1 | Transposase |
| MT485_RS23860 (MT485_23860) | 93596..93789 | - | 194 | Protein_113 | HNH endonuclease signature motif containing protein | - |
| MT485_RS25330 | 93871..94002 | + | 132 | WP_000124143.1 | hypothetical protein | - |
| MT485_RS23870 (MT485_23870) | 94993..95466 | - | 474 | WP_005038443.1 | CFA/I fimbrial subunit D | VF |
| MT485_RS23875 (MT485_23875) | 95717..96913 | + | 1197 | WP_005119583.1 | IS110 family transposase ISSfl4 | Transposase |
| MT485_RS23880 (MT485_23880) | 96908..97332 | - | 425 | Protein_118 | hypothetical protein | - |
| MT485_RS23885 (MT485_23885) | 97560..98198 | - | 639 | WP_000502854.1 | ParB N-terminal domain-containing protein | - |
| MT485_RS23890 (MT485_23890) | 98183..98326 | - | 144 | Protein_120 | DUF3440 domain-containing protein | - |
| MT485_RS23905 (MT485_23905) | 100930..101211 | + | 282 | Protein_123 | IS4 family transposase ISSfl1 | Transposase |
| MT485_RS23910 (MT485_23910) | 101384..101869 | - | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| MT485_RS23915 (MT485_23915) | 101857..102141 | - | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| MT485_RS23920 (MT485_23920) | 103043..103207 | + | 165 | WP_001346193.1 | hypothetical protein | - |
| MT485_RS23925 (MT485_23925) | 103461..105062 | - | 1602 | WP_005067462.1 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS23930 (MT485_23930) | 105059..105409 | - | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS23935 (MT485_23935) | 105406..106080 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS23940 (MT485_23940) | 106653..108107 | + | 1455 | WP_154074698.1 | hypothetical protein | VF |
| MT485_RS23945 (MT485_23945) | 108445..109509 | + | 1065 | Protein_131 | IS3 family transposase IS600 | Transposase |
| MT485_RS23950 (MT485_23950) | 109550..110353 | + | 804 | Protein_132 | IS3 family transposase ISKpn38 | Transposase |
| MT485_RS23955 (MT485_23955) | 110468..110809 | + | 342 | Protein_133 | IS21 family transposase ISEc62 | Transposase |
| MT485_RS23960 (MT485_23960) | 110792..111629 | + | 838 | Protein_134 | IS21 family transposase ISEc62 | Transposase |
| MT485_RS23965 (MT485_23965) | 111679..112875 | - | 1197 | WP_005119583.1 | IS110 family transposase ISSfl4 | Transposase |
| MT485_RS23970 (MT485_23970) | 113067..114071 | - | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| MT485_RS23975 (MT485_23975) | 114418..115227 | + | 810 | Protein_137 | IS110 family transposase | - |
| MT485_RS23980 (MT485_23980) | 115424..116203 | + | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| MT485_RS23985 (MT485_23985) | 117150..118079 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| MT485_RS23990 (MT485_23990) | 118296..118532 | - | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|