MGE detailed information
MGE type: Prophage MGE length: 9760 bp
Accession: NZ_CP094987 Location: 2648671..2658430 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: chromosome
Accession: NZ_CP094987 Location: 2648671..2658430 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MT485_RS13345 () | 2644616..2644980 | - | 365 | Protein_2594 | transposase | - |
| MT485_RS13350 () | 2645108..2646139 | + | 1032 | WP_000559908.1 | low conductance mechanosensitive channel YnaI | - |
| MT485_RS13355 () | 2646190..2647803 | - | 1614 | WP_000683016.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| MT485_RS13360 () | 2648140..2648607 | - | 468 | Protein_2597 | DNA-binding transcriptional regulator PgrR | - |
| MT485_RS13365 () | 2648671..2648981 | + | 311 | Protein_2598 | IS3 family transposase ISSfl10 | Transposase |
| MT485_RS13370 () | 2649024..2650219 | - | 1196 | Protein_2599 | IS3 family transposase | - |
| MT485_RS13375 () | 2650274..2651122 | + | 849 | Protein_2600 | IS3 family transposase ISSd1 | Transposase |
| MT485_RS13380 () | 2651239..2651520 | + | 282 | WP_005127484.1 | excisionase | - |
| MT485_RS13385 () | 2651486..2652563 | + | 1078 | Protein_2602 | phage integrase Arm DNA-binding domain-containing protein | - |
| - | 2652694..2652928 | + | 235 | - | - | Antitoxin Detail |
| - | 2652695..2652798 | - | 104 | - | - | Toxin Detail |
| MT485_RS13390 () | 2652956..2653297 | - | 342 | WP_000976476.1 | YebY family protein | - |
| MT485_RS13395 () | 2653310..2654182 | - | 873 | Protein_2604 | copper homeostasis membrane protein CopD | - |
| MT485_RS13400 () | 2654186..2654560 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| MT485_RS13405 () | 2654699..2654929 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| MT485_RS13410 () | 2655031..2655687 | + | 657 | Protein_2607 | carbon-nitrogen hydrolase family protein YobB | - |
| MT485_RS13415 () | 2655711..2656373 | + | 663 | WP_000944268.1 | exodeoxyribonuclease X | - |
| MT485_RS13420 () | 2656370..2658430 | - | 2061 | WP_000936980.1 | oligopeptidase B | - |
| MT485_RS13425 () | 2658640..2659299 | - | 660 | WP_000024751.1 | tellurite resistance TerB family protein | - |
| MT485_RS13430 () | 2659626..2659982 | - | 357 | WP_005047608.1 | protein YebF | - |
| MT485_RS13435 () | 2660049..2660339 | - | 291 | Protein_2612 | DNA damage-inducible protein YebG | - |
| MT485_RS13440 () | 2660473..2661651 | + | 1179 | WP_000173487.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| MT485_RS13445 () | 2661707..2662348 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|