MGE detailed information
MGE type: Prophage MGE length: 21772 bp
Accession: NZ_CP094987 Location: 2327657..2349428 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: chromosome
Accession: NZ_CP094987 Location: 2327657..2349428 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MT485_RS11685 (2324319) | 2324319..2325965 | - | 1647 | WP_005050037.1 | medium-chain fatty-acid--CoA ligase | - |
| MT485_RS11690 (2326022) | 2326022..2326315 | - | 294 | WP_000081083.1 | ferredoxin family protein | - |
| MT485_RS11695 (2326312) | 2326312..2327601 | - | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| MT485_RS11700 (2327657) | 2327657..2328595 | - | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
| MT485_RS11705 (2328615) | 2328615..2329379 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| MT485_RS11710 (2329699) | 2329699..2330178 | + | 480 | Protein_2272 | cupin domain-containing protein | - |
| MT485_RS11715 (2330233) | 2330233..2330930 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| MT485_RS11720 (2330924) | 2330924..2331091 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| MT485_RS11725 (2331493) | 2331493..2332254 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| MT485_RS11730 (2332322) | 2332322..2332525 | - | 204 | WP_000543395.1 | two-component system connector SafA | - |
| MT485_RS11735 (2332773) | 2332773..2335052 | - | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| MT485_RS11740 (2335386) | 2335386..2336135 | - | 750 | Protein_2278 | Type 1 fimbrin D-mannose specific adhesin | VF |
| MT485_RS11745 (2336191) | 2336191..2336888 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| MT485_RS11750 (2336906) | 2336906..2337784 | + | 879 | Protein_2280 | IS3 family transposase IS600 | Transposase |
| MT485_RS11755 (2337809) | 2337809..2337988 | - | 180 | WP_000372594.1 | class II holin family protein | - |
| MT485_RS11760 (2338138) | 2338138..2338299 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| MT485_RS11765 (2338299) | 2338299..2338484 | - | 186 | Protein_2283 | DUF1737 domain-containing protein | - |
| MT485_RS11770 (2338744) | 2338744..2339079 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| MT485_RS11775 (2339360) | 2339360..2339468 | - | 109 | Protein_2285 | DUF3927 family protein | - |
| MT485_RS11790 (2340389) | 2340389..2341210 | - | 822 | WP_000762882.1 | antitermination protein | - |
| MT485_RS11795 (2341225) | 2341225..2341581 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| MT485_RS11800 (2341594) | 2341594..2342643 | - | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| MT485_RS11805 (2342645) | 2342645..2342923 | - | 279 | Protein_2289 | hypothetical protein | - |
| MT485_RS11810 (2342990) | 2342990..2343241 | - | 252 | WP_000980987.1 | protein Rem | - |
| MT485_RS11815 (2343459) | 2343459..2343614 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| MT485_RS11820 (2343686) | 2343686..2343973 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| MT485_RS11825 (2343973) | 2343973..2344212 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| MT485_RS11830 (2344237) | 2344237..2344542 | + | 306 | WP_071818640.1 | hypothetical protein | - |
| MT485_RS11835 (2344539) | 2344539..2345695 | - | 1157 | Protein_2295 | IS3 family transposase IS600 | Transposase |
| MT485_RS11840 (2345757) | 2345757..2346776 | + | 1020 | Protein_2296 | MHS family MFS transporter YdfJ | - |
| MT485_RS11845 (2346865) | 2346865..2348325 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| MT485_RS11850 (2348361) | 2348361..2348564 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| MT485_RS11855 (2348742) | 2348742..2349428 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| MT485_RS11860 (2349517) | 2349517..2350263 | - | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| MT485_RS11865 (2350400) | 2350400..2352445 | + | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| MT485_RS11870 (2352490) | 2352490..2353008 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| MT485_RS11875 (2353284) | 2353284..2353508 | + | 225 | Protein_2303 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|