MGE detailed information
MGE type: Prophage MGE length: 61875 bp
Accession: NZ_CP094987 Location: 2143461..2205335 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: chromosome
Accession: NZ_CP094987 Location: 2143461..2205335 Organism: Shigella flexneri strain 3160_NCHU22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MT485_RS10630 () | 2139365..2140003 | - | 639 | WP_005049763.1 | SDR family oxidoreductase | - |
| MT485_RS10635 () | 2140021..2140602 | - | 582 | Protein_2061 | alpha/beta hydrolase | - |
| MT485_RS10640 () | 2140831..2142027 | + | 1197 | WP_025765450.1 | IS110-like element ISSfl4 family transposase | - |
| MT485_RS10645 () | 2142044..2142403 | - | 360 | Protein_2063 | alpha/beta hydrolase | - |
| MT485_RS10650 () | 2142403..2143323 | - | 921 | WP_000981715.1 | alpha/beta hydrolase | - |
| MT485_RS10655 () | 2143461..2143895 | + | 435 | Protein_2065 | HTH-type transcriptional regulator PgrR | VF |
| MT485_RS10665 () | 2145200..2145610 | + | 411 | Protein_2067 | YdaU family protein | - |
| MT485_RS10675 () | 2147376..2147545 | + | 170 | Protein_2069 | hypothetical protein | - |
| MT485_RS10680 () | 2147691..2148437 | + | 747 | WP_000788996.1 | ATP-binding protein | - |
| MT485_RS10685 () | 2148452..2148874 | + | 423 | WP_001118168.1 | DUF977 family protein | - |
| MT485_RS10690 () | 2148932..2149288 | + | 357 | WP_005048249.1 | hypothetical protein | - |
| MT485_RS10695 () | 2149381..2149599 | + | 219 | WP_000256998.1 | DUF4014 family protein | - |
| MT485_RS10700 () | 2149601..2149966 | + | 366 | WP_001229297.1 | HNH endonuclease signature motif containing protein | - |
| MT485_RS10705 () | 2149963..2150628 | + | 666 | WP_000208062.1 | hypothetical protein | - |
| MT485_RS10710 () | 2150628..2150993 | + | 366 | WP_000610655.1 | DUF551 domain-containing protein | - |
| - | 2151378..2151436 | - | 59 | - | - | Antitoxin Detail |
| MT485_RS10715 () | 2151448..2151603 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| MT485_RS10725 () | 2152940..2153539 | + | 600 | WP_000940329.1 | DUF1367 family protein | - |
| MT485_RS10730 () | 2153539..2153829 | + | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| MT485_RS10735 () | 2153826..2154380 | + | 555 | WP_000640143.1 | DUF1133 family protein | - |
| MT485_RS10740 () | 2154533..2154706 | + | 174 | WP_000504450.1 | hypothetical protein | - |
| MT485_RS10745 () | 2154768..2155924 | + | 1157 | WP_094081550.1 | IS3 family transposase IS600 | Transposase |
| MT485_RS10750 () | 2155917..2156477 | + | 561 | WP_072075205.1 | ORF6N domain-containing protein | - |
| MT485_RS10775 () | 2157111..2158715 | + | 1605 | WP_000615491.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| MT485_RS10780 () | 2159537..2160705 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| MT485_RS10785 () | 2161083..2161235 | + | 153 | Protein_2087 | Rha family transcriptional regulator | - |
| MT485_RS10790 () | 2161294..2161991 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| MT485_RS10795 () | 2162007..2162912 | + | 906 | Protein_2089 | IS3 family transposase IS600 | Transposase |
| MT485_RS10800 () | 2162940..2163308 | + | 369 | WP_011069357.1 | hypothetical protein | - |
| MT485_RS10805 () | 2163332..2163876 | + | 545 | Protein_2091 | tail fiber assembly protein | - |
| MT485_RS10810 () | 2163900..2165164 | + | 1265 | Protein_2092 | prophage tail fiber N-terminal domain-containing protein | - |
| MT485_RS10815 () | 2165115..2165738 | + | 624 | WP_000930141.1 | DUF4376 domain-containing protein | - |
| MT485_RS10820 () | 2165939..2166796 | - | 858 | WP_000968134.1 | Manganese transport system membrane protein MntB | ARG |
| MT485_RS10825 () | 2166793..2167650 | - | 858 | WP_001101728.1 | Manganese transport system membrane protein MntB | ARG |
| MT485_RS10830 () | 2167647..2168474 | - | 828 | WP_000983722.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| MT485_RS10835 () | 2168474..2169388 | - | 915 | WP_000555620.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| MT485_RS10840 () | 2169820..2170461 | - | 642 | Protein_2098 | Putative defective protein IntQ ; Integrase | Integrase |
| MT485_RS10845 () | 2170515..2171212 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| MT485_RS10850 () | 2171229..2171399 | - | 171 | Protein_2100 | DUF3596 domain-containing protein | - |
| MT485_RS10855 () | 2171401..2171568 | - | 168 | WP_005049823.1 | excisionase family protein | - |
| MT485_RS10860 () | 2171616..2172825 | - | 1210 | Protein_2102 | IS3 family transposase IS629 | Transposase |
| MT485_RS10865 () | 2172900..2173997 | - | 1098 | WP_001173294.1 | AAA family ATPase | - |
| MT485_RS10870 () | 2174003..2174263 | - | 261 | WP_005135630.1 | host-nuclease inhibitor Gam family protein | - |
| MT485_RS10875 () | 2174362..2175518 | + | 1157 | WP_094105050.1 | IS3 family transposase IS600 | Transposase |
| MT485_RS10880 () | 2175575..2176997 | - | 1423 | Protein_2106 | exodeoxyribonuclease VIII | - |
| MT485_RS10885 () | 2177097..2177372 | - | 276 | WP_005049830.1 | hypothetical protein | - |
| MT485_RS10890 () | 2177447..2177617 | - | 171 | WP_001359121.1 | YdaE family protein | - |
| MT485_RS10895 () | 2177617..2177838 | - | 222 | WP_000560226.1 | killing protein KilR | - |
| MT485_RS10905 () | 2179185..2180073 | - | 889 | Protein_2111 | Rha family transcriptional regulator | - |
| MT485_RS10910 () | 2181297..2181677 | + | 381 | Protein_2112 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS10915 () | 2181679..2181846 | + | 168 | Protein_2113 | IS66 family transposase ISSfl3 | Transposase |
| MT485_RS10920 () | 2181797..2182420 | + | 624 | WP_000930142.1 | DUF4376 domain-containing protein | - |
| MT485_RS10930 () | 2182600..2184315 | - | 1716 | WP_244758391.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| MT485_RS10935 () | 2184857..2185554 | + | 698 | WP_223368647.1 | IS1 family transposase IS1X2 | Transposase |
| MT485_RS10940 () | 2185834..2186280 | + | 447 | Protein_2117 | metallophosphoesterase | - |
| MT485_RS10945 () | 2186345..2187501 | + | 1157 | WP_094085510.1 | IS3 family transposase IS600 | Transposase |
| MT485_RS10950 () | 2187545..2187733 | + | 189 | Protein_2119 | serine/threonine-protein phosphatase | - |
| MT485_RS10955 () | 2187758..2187949 | - | 192 | WP_005049838.1 | YebW family protein | - |
| MT485_RS10960 () | 2188054..2188290 | - | 237 | WP_001295499.1 | YebV family protein | - |
| MT485_RS10965 () | 2188408..2189847 | - | 1440 | Protein_2122 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| MT485_RS10970 () | 2189927..2192547 | - | 2621 | Protein_2123 | hypothetical protein | VF |
| MT485_RS10975 () | 2192516..2193799 | - | 1284 | WP_001207280.1 | membrane integrity lipid transport subunit YebS | - |
| MT485_RS10980 () | 2193929..2194426 | + | 498 | WP_001043881.1 | L-methionine (R)-S-oxide reductase | - |
| MT485_RS10985 () | 2194523..2195221 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| MT485_RS10990 () | 2195241..2197289 | + | 2049 | WP_001055799.1 | carboxy terminal-processing peptidase | - |
| MT485_RS10995 () | 2197481..2198362 | + | 882 | WP_000984517.1 | protease HtpX | - |
| MT485_RS11000 () | 2198408..2199781 | - | 1374 | WP_001127218.1 | MFS transporter | - |
| MT485_RS11005 () | 2199958..2200749 | + | 792 | WP_001262181.1 | DNA-binding transcriptional regulator KdgR | - |
| MT485_RS11010 () | 2200892..2201131 | - | 240 | WP_001211010.1 | YobH family protein | - |
| MT485_RS11015 () | 2201290..2201433 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| MT485_RS11020 () | 2201508..2201795 | + | 288 | WP_001006860.1 | YebO family protein | - |
| MT485_RS11025 () | 2202466..2202609 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| MT485_RS11030 () | 2202622..2202831 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| MT485_RS11035 () | 2202997..2203806 | + | 810 | WP_000010128.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| MT485_RS11040 () | 2203803..2204369 | - | 567 | WP_001668667.1 | manganese efflux pump MntP | - |
| MT485_RS11050 () | 2205558..2206034 | - | 477 | WP_000156246.1 | DUF986 family protein | - |
| MT485_RS11055 () | 2206089..2206940 | - | 852 | WP_001331209.1 | PTS mannose transporter subunit IID | - |
| MT485_RS11060 () | 2206953..2207753 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| MT485_RS11065 () | 2207816..2208787 | - | 972 | WP_000150543.1 | PTS mannose transporter subunit IIAB | - |
| MT485_RS25265 () | 2209104..2209262 | + | 159 | WP_001327808.1 | protein YoaL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|