MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 43121 bp
Accession: NZ_CP094943 Location: 1784361..1827481 Organism: Dickeya dadantii strain FZ06 Replicon: chromosome
Accession: NZ_CP094943 Location: 1784361..1827481 Organism: Dickeya dadantii strain FZ06 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUB29_RS07905 | 1779988..1782123 | - | 2136 | WP_263065051.1 | TonB-dependent siderophore receptor | - |
| MUB29_RS07910 | 1782686..1783585 | - | 900 | WP_263065052.1 | MurR/RpiR family transcriptional regulator | - |
| MUB29_RS07915 | 1783995..1784186 | - | 192 | Protein_1542 | Arm DNA-binding domain-containing protein | - |
| MUB29_RS07920 | 1784842..1785927 | + | 1086 | WP_263065053.1 | DUF4297 domain-containing protein | - |
| MUB29_RS07925 | 1785987..1787720 | + | 1734 | WP_263065054.1 | hypothetical protein | - |
| MUB29_RS07930 | 1787878..1788435 | - | 558 | WP_263065055.1 | hypothetical protein | - |
| MUB29_RS07935 | 1788583..1789620 | + | 1038 | WP_263065056.1 | IS630 family transposase ISEc33 | Transposase |
| MUB29_RS07940 | 1789590..1791449 | - | 1860 | WP_263065057.1 | hypothetical protein | - |
| MUB29_RS07945 | 1791828..1792772 | + | 945 | WP_263065058.1 | zincin-like metallopeptidase domain-containing protein | - |
| MUB29_RS07950 | 1793092..1793328 | + | 237 | WP_012769207.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| MUB29_RS07955 | 1793331..1793645 | + | 315 | WP_119880390.1 | CcdB family protein | Toxin Detail |
| MUB29_RS07960 | 1793792..1793878 | - | 87 | Protein_1551 | mobilization protein mobC | - |
| MUB29_RS07965 | 1794119..1795843 | - | 1725 | WP_263065059.1 | retron Ec67 family RNA-directed DNA polymerase/endonuclease | - |
| MUB29_RS07970 | 1796431..1797177 | - | 747 | WP_263065060.1 | MobC family replication-relaxation protein | - |
| MUB29_RS07975 | 1797186..1799048 | - | 1863 | WP_263065061.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MUB29_RS07980 | 1799252..1799731 | + | 480 | WP_263065062.1 | hypothetical protein | - |
| MUB29_RS07985 | 1799768..1800070 | - | 303 | WP_263065063.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| MUB29_RS07990 | 1800112..1801128 | - | 1017 | WP_263065064.1 | hypothetical protein | VF |
| MUB29_RS07995 | 1801118..1802338 | - | 1221 | WP_263065065.1 | Cell division activator CedA | VF |
| MUB29_RS08000 | 1802335..1803228 | - | 894 | WP_263065066.1 | P-type conjugative transfer protein VirB9 | - |
| MUB29_RS08005 | 1803225..1803908 | - | 684 | WP_263065067.1 | Chitooligosaccharide deacetylase ChbG | VF |
| MUB29_RS08010 | 1804129..1805157 | - | 1029 | WP_263063194.1 | type IV secretion system protein | - |
| MUB29_RS08015 | 1805169..1805393 | - | 225 | WP_072033842.1 | EexN family lipoprotein | - |
| MUB29_RS08020 | 1805404..1806120 | - | 717 | WP_263063193.1 | type IV secretion system protein | - |
| MUB29_RS08025 | 1806145..1808892 | - | 2748 | WP_263065068.1 | PTS system N,N'-diacetylchitobiose-specific EIIC component | VF |
| MUB29_RS08030 | 1808902..1809177 | - | 276 | WP_033581363.1 | PTS system N,N'-diacetylchitobiose-specific EIIB component | VF |
| MUB29_RS08035 | 1809197..1809844 | - | 648 | WP_263065069.1 | Osmotically-inducible putative lipoprotein OsmE | VF |
| MUB29_RS08040 | 1809915..1810148 | - | 234 | WP_263065070.1 | hypothetical protein | - |
| MUB29_RS08045 | 1810790..1811821 | + | 1032 | WP_263065071.1 | hypothetical protein | - |
| MUB29_RS08050 | 1812082..1812291 | - | 210 | WP_015730135.1 | TraR/DksA family transcriptional regulator | - |
| MUB29_RS08055 | 1812281..1812865 | - | 585 | WP_263065072.1 | DUF2857 domain-containing protein | - |
| MUB29_RS08060 | 1812882..1813076 | - | 195 | WP_263065073.1 | AlpA family transcriptional regulator | - |
| MUB29_RS08065 | 1813382..1813552 | + | 171 | WP_263065074.1 | hypothetical protein | - |
| MUB29_RS08070 | 1813569..1813826 | - | 258 | WP_143840173.1 | helix-turn-helix transcriptional regulator | - |
| MUB29_RS08075 | 1813940..1814218 | - | 279 | WP_263065075.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| MUB29_RS08080 | 1814352..1814621 | + | 270 | WP_038900933.1 | helix-turn-helix transcriptional regulator | - |
| MUB29_RS08085 | 1815326..1815844 | + | 519 | WP_013318572.1 | Succinylornithine transaminase | VF |
| MUB29_RS08090 | 1815957..1817810 | + | 1854 | WP_263065076.1 | Exodeoxyribonuclease III | VF |
| MUB29_RS08095 | 1817824..1818231 | + | 408 | WP_263065077.1 | DUF1795 domain-containing protein | - |
| MUB29_RS08100 | 1818243..1822553 | + | 4311 | WP_263065078.1 | RHS repeat-associated core domain-containing protein | - |
| MUB29_RS08105 | 1822564..1823064 | + | 501 | WP_013318568.1 | SMI1/KNR4 family protein | - |
| MUB29_RS08110 | 1823609..1824535 | - | 927 | WP_263065079.1 | hypothetical protein | - |
| MUB29_RS08115 | 1825554..1825865 | + | 312 | WP_263065080.1 | DUF736 domain-containing protein | - |
| MUB29_RS08120 | 1826021..1827304 | - | 1284 | WP_263065081.1 | Fe(3+) ions import ATP-binding protein FbpC 2 ; Integrase | Integrase |
| MUB29_RS08130 | 1827741..1830860 | - | 3120 | WP_263065082.1 | beta-galactosidase | - |
| MUB29_RS08135 | 1831041..1832120 | - | 1080 | WP_216282358.1 | LacI family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|