MGE detailed information
MGE type: Prophage MGE length: 73522 bp
Accession: NZ_CP094343 Location: 6110434..6183955 Organism: Pseudomonas sp. M1 Replicon: chromosome
Accession: NZ_CP094343 Location: 6110434..6183955 Organism: Pseudomonas sp. M1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PM1_RS27150 (MRY70_27150) | 6105808..6106230 | - | 423 | WP_009615662.1 | OsmC family protein | - |
| PM1_RS27155 (MRY70_27155) | 6106589..6107236 | + | 648 | WP_009615660.1 | cAMP-activated global transcriptional regulator CRP | - |
| PM1_RS27160 (MRY70_27160) | 6107646..6108482 | - | 837 | WP_009615658.1 | indole-3-glycerol phosphate synthase TrpC | - |
| PM1_RS27165 (MRY70_27165) | 6108479..6109528 | - | 1050 | WP_009615656.1 | anthranilate phosphoribosyltransferase | - |
| PM1_RS27170 (MRY70_27170) | 6109525..6110121 | - | 597 | WP_009615655.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| PM1_RS27175 (MRY70_27175) | 6110434..6110694 | - | 261 | WP_009615653.1 | hypothetical protein | - |
| PM1_RS27180 (MRY70_27180) | 6110691..6111050 | - | 360 | WP_009615650.1 | hypothetical protein | - |
| PM1_RS27185 (MRY70_27185) | 6111047..6111664 | - | 618 | WP_009615649.1 | glycoside hydrolase family 19 protein | - |
| PM1_RS27190 (MRY70_27190) | 6111676..6112692 | - | 1017 | WP_009615648.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| PM1_RS27195 (MRY70_27195) | 6112739..6112945 | - | 207 | WP_009615647.1 | tail protein X | - |
| PM1_RS27200 (MRY70_27200) | 6112929..6113765 | - | 837 | WP_009615646.1 | phage tail protein | - |
| PM1_RS27205 (MRY70_27205) | 6113794..6115728 | - | 1935 | WP_009615643.1 | tail length determinator protein | - |
| PM1_RS27210 (MRY70_27210) | 6115887..6116198 | - | 312 | WP_009615639.1 | phage tail assembly protein | - |
| PM1_RS27215 (MRY70_27215) | 6116209..6116712 | - | 504 | WP_009615632.1 | phage major tail tube protein | - |
| PM1_RS27220 (MRY70_27220) | 6116725..6117882 | - | 1158 | WP_009615630.1 | phage tail sheath family protein | - |
| PM1_RS27225 (MRY70_27225) | 6117979..6118482 | - | 504 | WP_009615620.1 | DUF4376 domain-containing protein | - |
| PM1_RS27230 (MRY70_27230) | 6118495..6120057 | - | 1563 | WP_009615619.1 | phage tail protein | - |
| PM1_RS27235 (MRY70_27235) | 6120048..6120662 | - | 615 | WP_009615618.1 | phage tail protein I | - |
| PM1_RS27240 (MRY70_27240) | 6120655..6121545 | - | 891 | WP_009615617.1 | baseplate J/gp47 family protein | - |
| PM1_RS27245 (MRY70_27245) | 6121542..6121868 | - | 327 | WP_009615616.1 | GPW/gp25 family protein | - |
| PM1_RS27250 (MRY70_27250) | 6121969..6122532 | - | 564 | WP_009615615.1 | phage baseplate assembly protein V | - |
| PM1_RS27255 (MRY70_27255) | 6122529..6123047 | - | 519 | WP_009615614.1 | hypothetical protein | - |
| PM1_RS27260 (MRY70_27260) | 6123076..6123408 | - | 333 | WP_009615613.1 | phage holin family protein | - |
| PM1_RS27265 (MRY70_27265) | 6123689..6124195 | - | 507 | WP_238603208.1 | GNAT family N-acetyltransferase | - |
| PM1_RS27270 (MRY70_27270) | 6124236..6124595 | - | 360 | WP_009615611.1 | hypothetical protein | - |
| PM1_RS27275 (MRY70_27275) | 6124613..6124822 | - | 210 | WP_009615610.1 | TraR/DksA C4-type zinc finger protein | - |
| PM1_RS27280 (MRY70_27280) | 6125218..6125976 | + | 759 | WP_009615609.1 | helix-turn-helix transcriptional regulator | - |
| PM1_RS27285 (MRY70_27285) | 6126106..6126414 | + | 309 | WP_009615608.1 | pyocin activator PrtN family protein | - |
| PM1_RS27290 (MRY70_27290) | 6126706..6128193 | - | 1488 | WP_009615607.1 | hypothetical protein | VF |
| PM1_RS27295 (MRY70_27295) | 6128264..6129088 | - | 825 | WP_009615605.1 | phosphoglycolate phosphatase | - |
| PM1_RS27300 (MRY70_27300) | 6129088..6129762 | - | 675 | WP_009615603.1 | hypothetical protein | VF |
| PM1_RS27305 (MRY70_27305) | 6130240..6131067 | - | 828 | WP_009615601.1 | ABC transporter permease | - |
| PM1_RS27310 (MRY70_27310) | 6131081..6132328 | - | 1248 | WP_009615600.1 | ABC transporter permease | - |
| PM1_RS27315 (MRY70_27315) | 6132503..6133561 | - | 1059 | WP_009615599.1 | ABC transporter substrate-binding protein | - |
| PM1_RS27320 (MRY70_27320) | 6133603..6134712 | - | 1110 | WP_009615598.1 | hypothetical protein | VF |
| PM1_RS27325 (MRY70_27325) | 6135058..6136095 | - | 1038 | WP_024128032.1 | ABC transporter substrate-binding protein | - |
| PM1_RS27330 (MRY70_27330) | 6136238..6136867 | - | 630 | WP_009615596.1 | hypothetical protein | VF |
| PM1_RS27335 (MRY70_27335) | 6136906..6139329 | - | 2424 | WP_009615595.1 | sensor histidine kinase | - |
| PM1_RS27340 (MRY70_27340) | 6139472..6140512 | + | 1041 | WP_009615594.1 | alpha/beta hydrolase family protein | - |
| PM1_RS27345 (MRY70_27345) | 6140527..6141285 | - | 759 | WP_009615593.1 | DnaJ domain-containing protein | - |
| PM1_RS27350 (MRY70_27350) | 6141286..6141960 | - | 675 | WP_009615592.1 | nucleotidyltransferase family protein | - |
| PM1_RS27355 (MRY70_27355) | 6141957..6142973 | - | 1017 | WP_009615591.1 | phosphotransferase | - |
| PM1_RS27360 (MRY70_27360) | 6144246..6145958 | + | 1713 | WP_024128031.1 | group II intron reverse transcriptase/maturase | - |
| PM1_RS27365 (MRY70_27365) | 6146091..6148892 | + | 2802 | WP_009615588.1 | LPS-assembly protein LptD | - |
| PM1_RS27370 (MRY70_27370) | 6148873..6150165 | + | 1293 | WP_009615587.1 | peptidylprolyl isomerase SurA | - |
| PM1_RS27375 (MRY70_27375) | 6150297..6151295 | + | 999 | WP_009615585.1 | hypothetical protein | VF |
| PM1_RS27380 (MRY70_27380) | 6151459..6152268 | + | 810 | WP_009615583.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| PM1_RS27385 (MRY70_27385) | 6152297..6152677 | + | 381 | WP_009615581.1 | Co2+/Mg2+ efflux protein ApaG | - |
| PM1_RS27390 (MRY70_27390) | 6152677..6153501 | + | 825 | WP_009615579.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| PM1_RS27395 (MRY70_27395) | 6153524..6153853 | + | 330 | WP_009615578.1 | thiosulfate sulfurtransferase GlpE | - |
| PM1_RS27400 (MRY70_27400) | 6154129..6156051 | + | 1923 | WP_009615576.1 | PrkA family serine protein kinase | - |
| PM1_RS27405 (MRY70_27405) | 6156168..6157439 | + | 1272 | WP_009615574.1 | YeaH/YhbH family protein | - |
| PM1_RS27410 (MRY70_27410) | 6157436..6158989 | + | 1554 | WP_009615572.1 | SpoVR family protein | - |
| PM1_RS27415 (MRY70_27415) | 6159048..6159557 | + | 510 | WP_009615570.1 | DUF4136 domain-containing protein | - |
| PM1_RS27420 (MRY70_27420) | 6159984..6161210 | + | 1227 | WP_009615568.1 | multifunctional CCA addition/repair protein | - |
| PM1_RS27425 (MRY70_27425) | 6161435..6161971 | - | 537 | WP_009615566.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| PM1_RS27430 (MRY70_27430) | 6161962..6162315 | - | 354 | WP_009615564.1 | dihydroneopterin aldolase | - |
| PM1_RS27435 (MRY70_27435) | 6162398..6162967 | + | 570 | WP_009615562.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| PM1_RS27440 (MRY70_27440) | 6163061..6164086 | - | 1026 | WP_009615560.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| PM1_RS27445 (MRY70_27445) | 6164290..6164505 | + | 216 | WP_003085057.1 | 30S ribosomal protein S21 | - |
| PM1_RS27450 (MRY70_27450) | 6164695..6166704 | + | 2010 | WP_043299887.1 | DNA primase | - |
| PM1_RS27455 (MRY70_27455) | 6166783..6168633 | + | 1851 | WP_009615539.1 | RNA polymerase sigma factor RpoD | - |
| PM1_RS27460 (MRY70_27460) | 6168753..6172487 | + | 3735 | WP_009615538.1 | hypothetical protein | VF |
| PM1_RS27470 (MRY70_27470) | 6172758..6173528 | + | 771 | WP_009615537.1 | NERD domain-containing protein | - |
| PM1_RS27475 (MRY70_27475) | 6173613..6175397 | + | 1785 | WP_009615535.1 | AAA family ATPase | - |
| PM1_RS27480 (MRY70_27480) | 6175397..6177217 | + | 1821 | WP_043299885.1 | site-specific DNA-methyltransferase | - |
| PM1_RS27485 (MRY70_27485) | 6177220..6177993 | + | 774 | WP_009615531.1 | DEAD/DEAH box helicase family protein | - |
| PM1_RS27490 (MRY70_27490) | 6177912..6179873 | + | 1962 | WP_202964458.1 | restriction endonuclease subunit R | - |
| PM1_RS27495 (MRY70_27495) | 6180356..6181541 | + | 1186 | Protein_5421 | Fic family protein | - |
| PM1_RS27500 (MRY70_27500) | 6181562..6181986 | - | 425 | Protein_5422 | type II toxin-antitoxin system VapC family toxin | - |
| PM1_RS27505 (MRY70_27505) | 6181986..6182240 | - | 255 | WP_009615526.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| PM1_RS27510 (MRY70_27510) | 6182389..6182793 | - | 405 | WP_009615524.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PM1_RS27515 (MRY70_27515) | 6182826..6183008 | - | 183 | WP_009615522.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PM1_RS27520 (MRY70_27520) | 6183467..6183955 | + | 489 | WP_009615520.1 | BRO family protein | - |
| PM1_RS27525 (MRY70_27525) | 6184256..6184414 | - | 159 | WP_009615518.1 | YqaE/Pmp3 family membrane protein | - |
| PM1_RS27530 (MRY70_27530) | 6184770..6188705 | + | 3936 | WP_009615516.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|