MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 70577 bp
Accession: NZ_CP094132 Location: 1092384..1162960 Organism: Helicobacter pylori strain Hpfe051 Replicon: chromosome
Accession: NZ_CP094132 Location: 1092384..1162960 Organism: Helicobacter pylori strain Hpfe051 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG57_RS05200 (MPG57_05200) | 1087439..1088449 | + | 1011 | WP_245080487.1 | Holliday junction branch migration DNA helicase RuvB | - |
| MPG57_RS05205 (MPG57_05205) | 1088517..1088993 | + | 477 | WP_245080489.1 | Sec-independent protein translocase protein TatB | - |
| MPG57_RS05210 (MPG57_05210) | 1088986..1089747 | + | 762 | WP_245080491.1 | twin-arginine translocase subunit TatC | - |
| MPG57_RS05215 (MPG57_05215) | 1089748..1090785 | + | 1038 | WP_245080493.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| MPG57_RS05220 (MPG57_05220) | 1090782..1091318 | + | 537 | WP_245080495.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
| MPG57_RS05225 (MPG57_05225) | 1091312..1091554 | + | 243 | WP_180424228.1 | PP0621 family protein | - |
| MPG57_RS05230 (MPG57_05230) | 1091557..1091964 | + | 408 | WP_000906131.1 | hypothetical protein | - |
| MPG57_RS05240 (MPG57_05240) | 1092097..1092699 | - | 603 | WP_000291636.1 | outer membrane protein | - |
| MPG57_RS05245 (MPG57_05245) | 1092989..1093363 | + | 375 | WP_000772153.1 | Chemotaxis protein CheY | VF |
| MPG57_RS05250 (MPG57_05250) | 1093376..1094353 | + | 978 | WP_245081825.1 | 50S ribosomal protein L11 methyltransferase | - |
| MPG57_RS05255 (MPG57_05255) | 1094362..1096260 | + | 1899 | WP_245080497.1 | ATP-dependent zinc metalloprotease FtsH | - |
| MPG57_RS05260 (MPG57_05260) | 1096263..1096517 | + | 255 | WP_033123160.1 | hypothetical protein | - |
| MPG57_RS05265 (MPG57_05265) | 1096507..1097220 | + | 714 | WP_001122213.1 | CDP-diacylglycerol--serine O-phosphatidyltransferase | - |
| MPG57_RS05270 (MPG57_05270) | 1097217..1099442 | + | 2226 | WP_245080499.1 | copper-translocating P-type ATPase CopA | - |
| MPG57_RS05275 (MPG57_05275) | 1099443..1099643 | + | 201 | WP_000648265.1 | copper-binding metallochaperone CopP | - |
| MPG57_RS05280 (MPG57_05280) | 1099994..1100182 | - | 189 | WP_245080501.1 | hypothetical protein | - |
| MPG57_RS05285 (MPG57_05285) | 1100349..1101659 | - | 1311 | WP_245080503.1 | M14/M99 family metallopeptidase | - |
| MPG57_RS05290 (MPG57_05290) | 1101792..1102307 | + | 516 | WP_000353406.1 | flagellar FLiS export co-chaperone | - |
| MPG57_RS05295 (MPG57_05295) | 1102311..1103306 | - | 996 | WP_245080505.1 | HoxN/HupN/NixA family nickel/cobalt transporter | - |
| MPG57_RS05300 (MPG57_05300) | 1103468..1103746 | + | 279 | WP_060758130.1 | hypothetical protein | - |
| MPG57_RS05305 (MPG57_05305) | 1103743..1104315 | - | 573 | WP_245080507.1 | restriction endonuclease | - |
| MPG57_RS05310 (MPG57_05310) | 1104319..1104942 | - | 624 | WP_245080509.1 | hypothetical protein | VF |
| MPG57_RS05315 (MPG57_05315) | 1104936..1106591 | - | 1656 | WP_245080511.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| MPG57_RS05320 (MPG57_05320) | 1106683..1108122 | - | 1440 | WP_245080513.1 | outer membrane beta-barrel protein HofB | - |
| MPG57_RS05325 (MPG57_05325) | 1108423..1109346 | - | 924 | WP_245080515.1 | Aspartate carbamoyltransferase | VF |
| MPG57_RS05330 (MPG57_05330) | 1109413..1109928 | + | 516 | WP_000523558.1 | hypothetical protein | - |
| MPG57_RS05335 (MPG57_05335) | 1109928..1110635 | + | 708 | WP_199501342.1 | TlyA family RNA methyltransferase | - |
| MPG57_RS05340 (MPG57_05340) | 1110601..1111443 | + | 843 | WP_154461406.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| MPG57_RS05345 (MPG57_05345) | 1111490..1113415 | + | 1926 | WP_245080517.1 | transketolase | - |
| MPG57_RS05350 (MPG57_05350) | 1113412..1115748 | + | 2337 | WP_245080518.1 | PD-(D/E)XK nuclease family protein | - |
| MPG57_RS05355 (MPG57_05355) | 1115745..1118273 | + | 2529 | WP_245080519.1 | DNA translocase FtsK | - |
| MPG57_RS05360 (MPG57_05360) | 1118437..1119723 | + | 1287 | WP_245080520.1 | MFS transporter | - |
| MPG57_RS05365 (MPG57_05365) | 1119773..1120582 | + | 810 | WP_245080521.1 | Flagellar basal-body rod protein FlgG | VF |
| MPG57_RS05370 (MPG57_05370) | 1120770..1121147 | - | 378 | WP_245081827.1 | group I intron-associated PD-(D/E)XK endonuclease | - |
| MPG57_RS05375 (MPG57_05375) | 1121209..1121358 | - | 150 | Protein_1040 | DNA cytosine methyltransferase | - |
| MPG57_RS05380 (MPG57_05380) | 1121413..1122177 | + | 765 | WP_220977553.1 | hypothetical protein | - |
| MPG57_RS05385 (MPG57_05385) | 1122188..1124104 | + | 1917 | WP_245080526.1 | toprim domain-containing protein | - |
| MPG57_RS05390 (MPG57_05390) | 1124094..1124396 | + | 303 | WP_000649842.1 | TrbC/VirB2 family protein | - |
| MPG57_RS05395 (MPG57_05395) | 1124469..1124657 | + | 189 | WP_001871305.1 | hypothetical protein | - |
| MPG57_RS05400 (MPG57_05400) | 1124670..1127168 | + | 2499 | WP_245080527.1 | Type IV secretion system protein PtlC | VF |
| MPG57_RS05405 (MPG57_05405) | 1127161..1129095 | + | 1935 | WP_245080528.1 | type IA DNA topoisomerase | - |
| MPG57_RS07775 | 1129095..1129223 | + | 129 | WP_001185489.1 | hypothetical protein | - |
| MPG57_RS05410 (MPG57_05410) | 1129225..1130214 | + | 990 | WP_245080529.1 | hypothetical protein | VF |
| MPG57_RS05415 (MPG57_05415) | 1130214..1131755 | + | 1542 | WP_245080530.1 | hypothetical protein | VF |
| MPG57_RS05420 (MPG57_05420) | 1131752..1132987 | + | 1236 | WP_245080533.1 | Type IV secretion system protein virB10 | VF |
| MPG57_RS05425 (MPG57_05425) | 1133057..1133350 | + | 294 | WP_156584252.1 | hypothetical protein | - |
| MPG57_RS05430 (MPG57_05430) | 1133343..1133606 | + | 264 | WP_000564643.1 | hypothetical protein | - |
| MPG57_RS05435 (MPG57_05435) | 1133603..1133902 | + | 300 | WP_212890959.1 | hypothetical protein | - |
| MPG57_RS05440 (MPG57_05440) | 1133902..1134843 | + | 942 | WP_154547739.1 | Type IV secretion system protein VirB11 | VF |
| MPG57_RS05445 (MPG57_05445) | 1134840..1135295 | + | 456 | WP_245080535.1 | mobilization protein | - |
| MPG57_RS05450 (MPG57_05450) | 1135292..1135582 | + | 291 | WP_140526853.1 | hypothetical protein | - |
| MPG57_RS05455 (MPG57_05455) | 1135583..1136139 | + | 557 | Protein_1057 | hypothetical protein | - |
| MPG57_RS05460 (MPG57_05460) | 1136140..1137867 | + | 1728 | WP_245080537.1 | Protein VirD4 | VF |
| MPG57_RS05465 (MPG57_05465) | 1138141..1138422 | - | 282 | WP_140536263.1 | YafQ family addiction module toxin | Toxin Detail |
| MPG57_RS05470 (MPG57_05470) | 1138415..1138729 | - | 315 | WP_120942310.1 | hypothetical protein | Antitoxin Detail |
| MPG57_RS05475 (MPG57_05475) | 1139033..1140940 | + | 1908 | WP_245080540.1 | relaxase | - |
| MPG57_RS05480 (MPG57_05480) | 1140964..1142148 | - | 1185 | WP_245080543.1 | hypothetical protein | - |
| MPG57_RS05485 (MPG57_05485) | 1142180..1142464 | - | 285 | WP_245080546.1 | hypothetical protein | - |
| MPG57_RS05490 (MPG57_05490) | 1142546..1143202 | - | 657 | WP_212890967.1 | ParA family protein | - |
| MPG57_RS05495 (MPG57_05495) | 1143470..1151887 | - | 8418 | WP_245080549.1 | SNF2-related protein | - |
| MPG57_RS05500 (MPG57_05500) | 1152042..1153079 | + | 1038 | WP_212890969.1 | hypothetical protein | - |
| MPG57_RS05505 (MPG57_05505) | 1153080..1154474 | + | 1395 | Protein_1067 | hypothetical protein | - |
| MPG57_RS05510 (MPG57_05510) | 1154527..1156755 | + | 2229 | WP_245080552.1 | competence protein | - |
| MPG57_RS05515 (MPG57_05515) | 1156759..1158144 | + | 1386 | WP_245080554.1 | hypothetical protein | - |
| MPG57_RS05520 (MPG57_05520) | 1158144..1158722 | + | 579 | WP_245080557.1 | hypothetical protein | - |
| MPG57_RS05525 (MPG57_05525) | 1158718..1159767 | + | 1050 | Protein_1071 | hypothetical protein | - |
| MPG57_RS05530 (MPG57_05530) | 1159830..1160910 | - | 1081 | Protein_1072 | site-specific integrase | - |
| MPG57_RS05535 (MPG57_05535) | 1161178..1161987 | - | 810 | Protein_1073 | DNA (cytosine-5-)-methyltransferase | - |
| MPG57_RS05540 (MPG57_05540) | 1161996..1163786 | - | 1791 | WP_245081829.1 | translation elongation factor 4 | - |
| MPG57_RS05545 (MPG57_05545) | 1163801..1165651 | - | 1851 | WP_245080559.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| MPG57_RS05550 (MPG57_05550) | 1165654..1166430 | - | 777 | WP_000056250.1 | flagellar assembly protein FliH | - |
| MPG57_RS05555 (MPG57_05555) | 1166417..1167448 | - | 1032 | WP_120814013.1 | flagellar motor switch protein FliG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|