MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 55191 bp
Accession: NZ_CP094119 Location: 1368494..1423684 Organism: Helicobacter pylori strain Hpfe064 Replicon: chromosome
Accession: NZ_CP094119 Location: 1368494..1423684 Organism: Helicobacter pylori strain Hpfe064 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG78_RS06535 (MPG78_06535) | 1364915..1365616 | - | 702 | WP_245013356.1 | purine-nucleoside phosphorylase | - |
| MPG78_RS06540 (MPG78_06540) | 1365613..1366854 | - | 1242 | WP_245039987.1 | phosphopentomutase | - |
| MPG78_RS06545 (MPG78_06545) | 1366866..1368122 | - | 1257 | WP_000577848.1 | NupC/NupG family nucleoside CNT transporter | - |
| MPG78_RS06555 (MPG78_06555) | 1368449..1369780 | + | 1332 | WP_245039991.1 | MFS transporter | - |
| MPG78_RS06560 (MPG78_06560) | 1369799..1370560 | + | 762 | WP_212791582.1 | ATP-binding protein | - |
| MPG78_RS06565 (MPG78_06565) | 1370569..1371720 | - | 1152 | WP_245039993.1 | cation:proton antiporter | - |
| MPG78_RS06570 (MPG78_06570) | 1371735..1373120 | - | 1386 | WP_245039995.1 | HP1184 family multidrug efflux MATE transporter | - |
| MPG78_RS06575 (MPG78_06575) | 1373280..1374455 | - | 1176 | WP_245039997.1 | sugar transporter | - |
| MPG78_RS06580 (MPG78_06580) | 1374731..1375474 | + | 744 | WP_245039999.1 | carbonic anhydrase | - |
| MPG78_RS06585 (MPG78_06585) | 1375587..1376351 | + | 765 | WP_245040001.1 | hypothetical protein | - |
| MPG78_RS06590 (MPG78_06590) | 1376362..1378278 | + | 1917 | WP_245040003.1 | toprim domain-containing protein | - |
| MPG78_RS06595 (MPG78_06595) | 1378268..1378570 | + | 303 | WP_000649842.1 | TrbC/VirB2 family protein | - |
| MPG78_RS06600 (MPG78_06600) | 1378571..1378831 | + | 261 | WP_000602756.1 | hypothetical protein | - |
| MPG78_RS06605 (MPG78_06605) | 1378844..1381325 | + | 2482 | Protein_1284 | VirB4 family type IV secretion system protein | - |
| MPG78_RS06610 (MPG78_06610) | 1381318..1383252 | + | 1935 | WP_245041173.1 | type IA DNA topoisomerase | - |
| MPG78_RS07770 | 1383252..1383380 | + | 129 | WP_001185489.1 | hypothetical protein | - |
| MPG78_RS06615 (MPG78_06615) | 1383382..1384368 | + | 987 | WP_245040005.1 | hypothetical protein | VF |
| MPG78_RS06620 (MPG78_06620) | 1384368..1385909 | + | 1542 | WP_245040007.1 | hypothetical protein | VF |
| MPG78_RS06625 (MPG78_06625) | 1385906..1387141 | + | 1236 | WP_245040009.1 | Type IV secretion system protein virB10 | VF |
| MPG78_RS06630 (MPG78_06630) | 1387211..1387504 | + | 294 | WP_000671327.1 | hypothetical protein | - |
| MPG78_RS06635 (MPG78_06635) | 1387497..1387760 | + | 264 | WP_220942401.1 | hypothetical protein | - |
| MPG78_RS06640 (MPG78_06640) | 1387757..1388056 | + | 300 | WP_245040017.1 | hypothetical protein | - |
| MPG78_RS06645 (MPG78_06645) | 1388056..1388943 | + | 888 | WP_245040020.1 | Type IV secretion system protein VirB11 | VF |
| MPG78_RS06650 (MPG78_06650) | 1388993..1389448 | + | 456 | WP_245040022.1 | mobilization protein | - |
| MPG78_RS06655 (MPG78_06655) | 1389445..1389735 | + | 291 | WP_075658071.1 | hypothetical protein | - |
| MPG78_RS06660 (MPG78_06660) | 1389736..1390293 | + | 558 | WP_245040024.1 | hypothetical protein | - |
| MPG78_RS06665 (MPG78_06665) | 1390294..1392021 | + | 1728 | WP_219026171.1 | Protein VirD4 | VF |
| MPG78_RS06670 (MPG78_06670) | 1392291..1392572 | - | 282 | WP_000921941.1 | YafQ family addiction module toxin | Toxin Detail |
| MPG78_RS06675 (MPG78_06675) | 1392565..1392879 | - | 315 | WP_000065285.1 | hypothetical protein | Antitoxin Detail |
| MPG78_RS06680 (MPG78_06680) | 1393172..1395083 | + | 1912 | Protein_1300 | relaxase/mobilization nuclease domain-containing protein | - |
| MPG78_RS06685 (MPG78_06685) | 1395108..1396271 | - | 1164 | WP_245040025.1 | hypothetical protein | - |
| MPG78_RS06690 (MPG78_06690) | 1396303..1396587 | - | 285 | WP_000394639.1 | hypothetical protein ; Integrase | Integrase |
| MPG78_RS06695 (MPG78_06695) | 1396672..1397328 | - | 657 | WP_245040026.1 | ParA family protein | - |
| MPG78_RS06700 (MPG78_06700) | 1397583..1406000 | - | 8418 | Protein_1304 | SNF2-related protein | - |
| MPG78_RS06705 (MPG78_06705) | 1406155..1407192 | + | 1038 | WP_245040027.1 | hypothetical protein | - |
| MPG78_RS06710 (MPG78_06710) | 1407193..1408587 | + | 1395 | Protein_1306 | hypothetical protein | - |
| MPG78_RS06715 (MPG78_06715) | 1408631..1410805 | + | 2175 | Protein_1307 | competence protein | - |
| MPG78_RS06720 (MPG78_06720) | 1410809..1412194 | + | 1386 | WP_245040028.1 | hypothetical protein | - |
| MPG78_RS06725 (MPG78_06725) | 1412194..1413396 | + | 1203 | WP_245040029.1 | hypothetical protein | - |
| MPG78_RS06730 (MPG78_06730) | 1413459..1414536 | - | 1078 | Protein_1310 | Tyrosine recombinase XerH ; Integrase | Integrase |
| MPG78_RS06735 (MPG78_06735) | 1415013..1416257 | - | 1245 | WP_245040030.1 | DUF874 family protein | - |
| MPG78_RS06740 (MPG78_06740) | 1416356..1418794 | - | 2439 | WP_001916772.1 | pyruvate, water dikinase | - |
| MPG78_RS07775 | 1418980..1419111 | + | 132 | WP_001871589.1 | hypothetical protein | - |
| MPG78_RS06745 (MPG78_06745) | 1419152..1420990 | + | 1839 | WP_001271848.1 | threonine--tRNA ligase | - |
| MPG78_RS06750 (MPG78_06750) | 1420987..1421598 | + | 612 | WP_000089219.1 | translation initiation factor IF-3 | - |
| MPG78_RS06755 (MPG78_06755) | 1421579..1421773 | + | 195 | WP_001125542.1 | 50S ribosomal protein L35 | - |
| MPG78_RS06760 (MPG78_06760) | 1421868..1422218 | + | 351 | WP_001264175.1 | 50S ribosomal protein L20 | - |
| MPG78_RS06765 (MPG78_06765) | 1422418..1423278 | + | 861 | WP_000750190.1 | hypothetical protein | VF |
| MPG78_RS06770 (MPG78_06770) | 1423631..1423819 | + | 189 | Protein_1319 | DUF1104 domain-containing protein | - |
| MPG78_RS06775 (MPG78_06775) | 1423782..1425413 | - | 1632 | WP_245040031.1 | type IA DNA topoisomerase | - |
| MPG78_RS06780 (MPG78_06780) | 1425416..1427563 | - | 2148 | WP_245040032.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| MPG78_RS06785 (MPG78_06785) | 1427490..1427786 | - | 297 | WP_245040033.1 | hypothetical protein | - |
| MPG78_RS06790 (MPG78_06790) | 1428100..1428375 | - | 276 | WP_245040034.1 | virB2 type IV secretion protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|