MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 61306 bp
Accession: NZ_CP094082 Location: 310313..371618 Organism: Helicobacter pylori strain Hpfe097 Replicon: chromosome
Accession: NZ_CP094082 Location: 310313..371618 Organism: Helicobacter pylori strain Hpfe097 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG63_RS01580 (MPG63_01580) | 305875..306636 | - | 762 | WP_000312894.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| MPG63_RS01585 (MPG63_01585) | 306655..307995 | - | 1341 | WP_245047530.1 | MFS transporter | - |
| MPG63_RS01595 (MPG63_01595) | 308322..309578 | + | 1257 | WP_245047532.1 | NupC/NupG family nucleoside CNT transporter | - |
| MPG63_RS01600 (MPG63_01600) | 309590..310831 | + | 1242 | WP_245047534.1 | phosphopentomutase | - |
| MPG63_RS01605 (MPG63_01605) | 310828..311529 | + | 702 | WP_245047536.1 | purine-nucleoside phosphorylase | - |
| MPG63_RS01610 (MPG63_01610) | 311619..311840 | + | 222 | WP_245047538.1 | hypothetical protein | - |
| MPG63_RS01615 (MPG63_01615) | 311978..313900 | + | 1923 | WP_245047539.1 | Hop family adhesin HopQ | - |
| MPG63_RS01620 (MPG63_01620) | 314324..315631 | + | 1308 | WP_180620401.1 | NCS2 family permease | - |
| MPG63_RS01625 (MPG63_01625) | 315761..316984 | + | 1224 | WP_154506897.1 | sugar MFS transporter | - |
| MPG63_RS01630 (MPG63_01630) | 317204..317755 | - | 552 | WP_245047541.1 | hypothetical protein | - |
| MPG63_RS01635 (MPG63_01635) | 317876..318709 | - | 834 | WP_245047543.1 | transporter substrate-binding domain-containing protein | - |
| MPG63_RS01640 (MPG63_01640) | 318758..319504 | - | 747 | WP_245047546.1 | amino acid ABC transporter ATP-binding protein | - |
| MPG63_RS01645 (MPG63_01645) | 319506..320177 | - | 672 | WP_245047548.1 | amino acid ABC transporter permease | - |
| MPG63_RS01650 (MPG63_01650) | 320180..320833 | - | 654 | WP_120857998.1 | amino acid ABC transporter permease | - |
| MPG63_RS01655 (MPG63_01655) | 321014..323107 | + | 2094 | WP_245047550.1 | carbon starvation CstA family protein | - |
| MPG63_RS01660 (MPG63_01660) | 323457..324871 | - | 1415 | Protein_319 | outer membrane beta-barrel protein HofH | - |
| MPG63_RS01665 (MPG63_01665) | 325177..326814 | - | 1638 | WP_245047552.1 | glucose-6-phosphate isomerase | - |
| MPG63_RS01670 (MPG63_01670) | 326878..328038 | + | 1161 | WP_245047554.1 | HP1165 family MFS efflux transporter | - |
| MPG63_RS01675 (MPG63_01675) | 328216..329184 | - | 969 | WP_245047556.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| MPG63_RS01680 (MPG63_01680) | 329210..329401 | - | 192 | WP_001090940.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
| MPG63_RS01685 (MPG63_01685) | 329537..330118 | + | 582 | WP_164501742.1 | DedA family protein | - |
| MPG63_RS01690 (MPG63_01690) | 330208..330702 | + | 495 | WP_000516046.1 | flavodoxin | - |
| MPG63_RS01695 (MPG63_01695) | 330756..331184 | + | 429 | WP_180396927.1 | rRNA maturation RNase YbeY | - |
| MPG63_RS01700 (MPG63_01700) | 331279..331746 | + | 468 | WP_245047558.1 | hypothetical protein | - |
| MPG63_RS01705 (MPG63_01705) | 331752..332399 | + | 648 | Protein_328 | TauD/TfdA family dioxygenase | - |
| MPG63_RS01710 (MPG63_01710) | 332709..333785 | + | 1077 | WP_245047560.1 | site-specific integrase | - |
| MPG63_RS01715 (MPG63_01715) | 333863..335065 | - | 1203 | WP_245047562.1 | hypothetical protein | - |
| MPG63_RS01720 (MPG63_01720) | 335065..336450 | - | 1386 | WP_245047564.1 | hypothetical protein | - |
| MPG63_RS01725 (MPG63_01725) | 336454..338589 | - | 2136 | WP_245047566.1 | competence protein | - |
| MPG63_RS01730 (MPG63_01730) | 338647..340041 | - | 1395 | Protein_333 | hypothetical protein | - |
| MPG63_RS01735 (MPG63_01735) | 340042..341079 | - | 1038 | WP_245047568.1 | hypothetical protein | - |
| MPG63_RS01740 (MPG63_01740) | 341234..349649 | + | 8416 | Protein_335 | SNF2-related protein | - |
| MPG63_RS01745 (MPG63_01745) | 349915..350571 | + | 657 | WP_245047570.1 | ParA family protein | - |
| MPG63_RS01750 (MPG63_01750) | 350653..350937 | + | 285 | WP_231200543.1 | hypothetical protein | - |
| MPG63_RS01755 (MPG63_01755) | 350969..352132 | + | 1164 | WP_245047572.1 | hypothetical protein | - |
| MPG63_RS01760 (MPG63_01760) | 352157..354067 | - | 1911 | WP_245047577.1 | relaxase/mobilization nuclease domain-containing protein | - |
| MPG63_RS01765 (MPG63_01765) | 354343..354657 | + | 315 | WP_245047578.1 | hypothetical protein | Antitoxin Detail |
| MPG63_RS01770 (MPG63_01770) | 354650..354931 | + | 282 | WP_156584260.1 | YafQ family addiction module toxin | Toxin Detail |
| MPG63_RS01775 (MPG63_01775) | 355259..356986 | - | 1728 | WP_245047579.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MPG63_RS01780 (MPG63_01780) | 356987..357544 | - | 558 | WP_245047580.1 | hypothetical protein | - |
| MPG63_RS01785 (MPG63_01785) | 357545..357835 | - | 291 | WP_245047582.1 | hypothetical protein | - |
| MPG63_RS01790 (MPG63_01790) | 357832..358287 | - | 456 | WP_245047584.1 | mobilization protein | - |
| MPG63_RS01795 (MPG63_01795) | 358284..359224 | - | 941 | Protein_346 | ATPase, T2SS/T4P/T4SS family | - |
| MPG63_RS01800 (MPG63_01800) | 359224..359522 | - | 299 | Protein_347 | hypothetical protein | - |
| MPG63_RS01805 (MPG63_01805) | 359519..359782 | - | 264 | WP_180433943.1 | hypothetical protein | - |
| MPG63_RS01810 (MPG63_01810) | 359775..360068 | - | 294 | Protein_349 | hypothetical protein | - |
| MPG63_RS01815 (MPG63_01815) | 360138..361357 | - | 1220 | Protein_350 | DNA type IV secretion system protein ComB10 | - |
| MPG63_RS01820 (MPG63_01820) | 361354..362895 | - | 1542 | Protein_351 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| MPG63_RS01825 (MPG63_01825) | 362895..363878 | - | 984 | WP_245047586.1 | virB8 family protein | - |
| MPG63_RS07830 | 363880..364008 | - | 129 | WP_001185489.1 | hypothetical protein | - |
| MPG63_RS01830 (MPG63_01830) | 364008..365942 | - | 1935 | WP_245047593.1 | type IA DNA topoisomerase | - |
| MPG63_RS01835 (MPG63_01835) | 365915..368434 | - | 2520 | WP_245047595.1 | VirB4 family type IV secretion system protein | - |
| MPG63_RS01840 (MPG63_01840) | 368708..369010 | - | 303 | WP_050850792.1 | TrbC/VirB2 family protein | - |
| MPG63_RS01845 (MPG63_01845) | 369000..370916 | - | 1917 | WP_245047597.1 | toprim domain-containing protein | - |
| MPG63_RS01850 (MPG63_01850) | 370926..371689 | - | 764 | Protein_358 | hypothetical protein | - |
| MPG63_RS01855 (MPG63_01855) | 371737..371877 | + | 141 | Protein_359 | taurine catabolism dioxygenase TauD | - |
| MPG63_RS01860 (MPG63_01860) | 371892..372425 | - | 534 | WP_000549905.1 | Fic/DOC family protein | - |
| MPG63_RS01865 (MPG63_01865) | 372449..373222 | - | 774 | WP_245047599.1 | pyrroline-5-carboxylate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|