MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 82983 bp
Accession: NZ_CP094076 Location: 456656..539638 Organism: Helicobacter pylori strain Hpfe102 Replicon: chromosome
Accession: NZ_CP094076 Location: 456656..539638 Organism: Helicobacter pylori strain Hpfe102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG56_RS02265 (MPG56_02265) | 451858..452346 | + | 489 | WP_001020218.1 | hypothetical protein | - |
| MPG56_RS02270 (MPG56_02270) | 452357..453883 | + | 1527 | WP_245044099.1 | glutamine-hydrolyzing GMP synthase | - |
| MPG56_RS02275 (MPG56_02275) | 453964..454713 | + | 750 | WP_245044101.1 | HpaA family protein | - |
| MPG56_RS02300 (MPG56_02300) | 455924..457795 | + | 1872 | WP_245044103.1 | mechanosensitive ion channel family protein | - |
| MPG56_RS02305 (MPG56_02305) | 457798..458967 | - | 1170 | WP_024773516.1 | cyclopropane fatty acid synthase | - |
| MPG56_RS02310 (MPG56_02310) | 459137..461089 | + | 1953 | WP_245044105.1 | methionine--tRNA ligase | - |
| MPG56_RS02315 (MPG56_02315) | 461090..462097 | + | 1008 | WP_245044106.1 | ferrochelatase | - |
| MPG56_RS02320 (MPG56_02320) | 462101..462886 | + | 786 | WP_245044108.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| MPG56_RS02325 (MPG56_02325) | 462903..463331 | + | 429 | WP_245044110.1 | PaaI family thioesterase | - |
| MPG56_RS02330 (MPG56_02330) | 463336..464505 | + | 1170 | WP_180432308.1 | glycosyltransferase family 4 protein | - |
| MPG56_RS02335 (MPG56_02335) | 464520..466367 | + | 1848 | WP_180454778.1 | arginine decarboxylase | - |
| MPG56_RS02340 (MPG56_02340) | 466489..467391 | - | 903 | Protein_447 | hypothetical protein | - |
| MPG56_RS02345 (MPG56_02345) | 467527..469362 | - | 1836 | WP_245044112.1 | hypothetical protein | - |
| MPG56_RS02350 (MPG56_02350) | 469407..470660 | - | 1254 | Protein_449 | DHH family phosphoesterase | - |
| MPG56_RS02355 (MPG56_02355) | 470701..472431 | - | 1731 | Protein_450 | DUF262 domain-containing protein | - |
| MPG56_RS02360 (MPG56_02360) | 472588..472725 | - | 138 | WP_245043820.1 | hypothetical protein | - |
| MPG56_RS02375 (MPG56_02375) | 477037..477861 | + | 825 | WP_245044114.1 | mechanosensitive ion channel family protein | - |
| MPG56_RS02380 (MPG56_02380) | 478796..479953 | - | 1158 | WP_015642573.1 | cell division protein FtsZ | - |
| MPG56_RS02385 (MPG56_02385) | 480088..481584 | - | 1497 | WP_245044116.1 | cell division protein FtsA | - |
| MPG56_RS02390 (MPG56_02390) | 481584..483047 | - | 1464 | WP_245044118.1 | peptidylprolyl isomerase | - |
| MPG56_RS02395 (MPG56_02395) | 483178..484488 | + | 1311 | WP_245044120.1 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase | VF |
| MPG56_RS02400 (MPG56_02400) | 484561..484842 | - | 282 | WP_245044122.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | - |
| MPG56_RS02405 (MPG56_02405) | 484857..486332 | - | 1476 | WP_245044124.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| MPG56_RS02410 (MPG56_02410) | 486345..487412 | - | 1068 | WP_245044126.1 | hypothetical protein | - |
| MPG56_RS02415 (MPG56_02415) | 487524..489626 | + | 2103 | WP_245044128.1 | glycine--tRNA ligase subunit beta | - |
| MPG56_RS02420 (MPG56_02420) | 489616..490911 | + | 1296 | WP_245044130.1 | TolC family protein | - |
| MPG56_RS02425 (MPG56_02425) | 490908..491987 | + | 1080 | WP_245044132.1 | efflux RND transporter periplasmic adaptor subunit | - |
| MPG56_RS02430 (MPG56_02430) | 491987..495046 | + | 3060 | WP_245044134.1 | efflux RND transporter permease subunit | - |
| MPG56_RS02435 (MPG56_02435) | 495057..495338 | + | 282 | WP_000880314.1 | DUF3240 family protein | - |
| MPG56_RS02440 (MPG56_02440) | 495406..495693 | + | 288 | WP_000271454.1 | endoribonuclease VapD | - |
| MPG56_RS02445 (MPG56_02445) | 496042..496806 | + | 765 | WP_245044136.1 | hypothetical protein | - |
| MPG56_RS02450 (MPG56_02450) | 496816..498737 | + | 1922 | Protein_467 | hypothetical protein | - |
| MPG56_RS02455 (MPG56_02455) | 498727..499029 | + | 303 | WP_050850792.1 | TrbC/VirB2 family protein | - |
| MPG56_RS02460 (MPG56_02460) | 499030..499290 | + | 261 | WP_245044138.1 | virB3 type IV secretion protein | - |
| MPG56_RS02465 (MPG56_02465) | 499303..501801 | + | 2499 | WP_245044140.1 | hypothetical protein | VF |
| MPG56_RS02470 (MPG56_02470) | 501794..503728 | + | 1935 | WP_245044442.1 | type IA DNA topoisomerase | - |
| MPG56_RS07705 | 503728..503856 | + | 129 | WP_001185489.1 | hypothetical protein | - |
| MPG56_RS02475 (MPG56_02475) | 503858..504841 | + | 984 | WP_245044142.1 | hypothetical protein | VF |
| MPG56_RS02480 (MPG56_02480) | 504841..506382 | + | 1542 | WP_245044144.1 | hypothetical protein | VF |
| MPG56_RS02485 (MPG56_02485) | 506379..507614 | + | 1236 | WP_000734987.1 | hypothetical protein | VF |
| MPG56_RS02490 (MPG56_02490) | 507684..507977 | + | 294 | WP_000671327.1 | hypothetical protein | - |
| MPG56_RS02495 (MPG56_02495) | 507970..508233 | + | 264 | WP_029650283.1 | hypothetical protein | - |
| MPG56_RS02500 (MPG56_02500) | 508230..508529 | + | 300 | WP_000660136.1 | hypothetical protein | - |
| MPG56_RS02505 (MPG56_02505) | 508529..509470 | + | 942 | WP_154497724.1 | hypothetical protein | VF |
| MPG56_RS02510 (MPG56_02510) | 509467..509922 | + | 456 | WP_025276161.1 | hypothetical protein | - |
| MPG56_RS02515 (MPG56_02515) | 509919..510209 | + | 291 | WP_000159818.1 | hypothetical protein | - |
| MPG56_RS02520 (MPG56_02520) | 510210..510767 | + | 558 | WP_245044146.1 | hypothetical protein | - |
| MPG56_RS02525 (MPG56_02525) | 510768..512495 | + | 1728 | WP_245044148.1 | hypothetical protein | VF |
| MPG56_RS02530 (MPG56_02530) | 512769..513050 | - | 282 | WP_000921926.1 | YafQ family addiction module toxin | Toxin Detail |
| MPG56_RS02535 (MPG56_02535) | 513043..513357 | - | 315 | WP_245044150.1 | hypothetical protein | Antitoxin Detail |
| MPG56_RS02540 (MPG56_02540) | 513652..515558 | + | 1907 | Protein_486 | relaxase/mobilization nuclease domain-containing protein | - |
| MPG56_RS02545 (MPG56_02545) | 515583..516767 | - | 1185 | WP_245044152.1 | hypothetical protein | - |
| MPG56_RS02550 (MPG56_02550) | 516799..517083 | - | 285 | WP_245044154.1 | hypothetical protein ; Integrase | Integrase |
| MPG56_RS02555 (MPG56_02555) | 517165..517820 | - | 656 | Protein_489 | ParA family protein | - |
| MPG56_RS02560 (MPG56_02560) | 518087..526518 | - | 8432 | Protein_490 | SNF2-related protein | - |
| MPG56_RS02565 (MPG56_02565) | 526673..527263 | + | 591 | WP_245044156.1 | hypothetical protein | - |
| MPG56_RS02570 (MPG56_02570) | 527264..528437 | + | 1174 | Protein_492 | hypothetical protein | - |
| MPG56_RS02575 (MPG56_02575) | 528490..530688 | + | 2199 | WP_245044158.1 | competence protein | - |
| MPG56_RS02580 (MPG56_02580) | 530692..532077 | + | 1386 | WP_245044160.1 | hypothetical protein | - |
| MPG56_RS02585 (MPG56_02585) | 532077..533279 | + | 1203 | WP_245044162.1 | hypothetical protein | - |
| MPG56_RS02590 (MPG56_02590) | 533341..534417 | - | 1077 | Protein_496 | Tyrosine recombinase XerC ; Integrase | Integrase |
| MPG56_RS02595 (MPG56_02595) | 534693..536253 | + | 1561 | Protein_497 | dynamin family protein | - |
| MPG56_RS02600 (MPG56_02600) | 536255..538550 | + | 2296 | Protein_498 | dynamin family protein | - |
| MPG56_RS02605 (MPG56_02605) | 538550..540312 | + | 1763 | Protein_499 | dynamin family protein | - |
| MPG56_RS02610 (MPG56_02610) | 540422..541360 | + | 939 | WP_024115525.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| MPG56_RS02615 (MPG56_02615) | 541374..542270 | + | 897 | WP_245044164.1 | glycine--tRNA ligase subunit alpha | - |
| MPG56_RS02620 (MPG56_02620) | 542272..543003 | + | 732 | WP_245044165.1 | Nif3-like dinuclear metal center hexameric protein | - |
| MPG56_RS02625 (MPG56_02625) | 543013..543777 | + | 765 | WP_245044167.1 | zinc ribbon domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|